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CCDC83 coiled-coil domain containing 83 [ Equus caballus (horse) ]

Gene ID: 100050777, updated on 8-Mar-2024

Summary

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Official Symbol
CCDC83provided by VGNC
Official Full Name
coiled-coil domain containing 83provided by VGNC
Primary source
VGNC:VGNC:16180
See related
Ensembl:ENSECAG00000023925
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CCDC83 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (61925831..61973444, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 7 NC_009150.2 (59746325..59793678, complement)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111774323 Neighboring gene uncharacterized LOC102148213 Neighboring gene uncharacterized LOC102148473 Neighboring gene phosphatidylinositol binding clathrin assembly protein Neighboring gene uncharacterized LOC111774324 Neighboring gene synaptotagmin like 2 Neighboring gene uncharacterized LOC111774325

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 83

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    61925831..61973444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023645613.1 → XP_023501381.1  coiled-coil domain-containing protein 83 isoform X1

    UniProtKB/TrEMBL
    F6XWA1
    Conserved Domains (1) summary
    cl25732
    Location:33 → 253
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_023645612.1 → XP_023501380.1  coiled-coil domain-containing protein 83 isoform X1

    UniProtKB/TrEMBL
    F6XWA1
    Conserved Domains (1) summary
    cl25732
    Location:33 → 253
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_023645619.1 → XP_023501387.1  coiled-coil domain-containing protein 83 isoform X3

    Conserved Domains (1) summary
    cl25732
    Location:1 → 191
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_023645617.1 → XP_023501385.1  coiled-coil domain-containing protein 83 isoform X2

    Conserved Domains (2) summary
    cl21456
    Location:42 → 97
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    cl25732
    Location:3 → 210
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_023645615.1 → XP_023501383.1  coiled-coil domain-containing protein 83 isoform X1

    UniProtKB/TrEMBL
    F6XWA1
    Conserved Domains (1) summary
    cl25732
    Location:33 → 253
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_023645618.1 → XP_023501386.1  coiled-coil domain-containing protein 83 isoform X2

    Conserved Domains (2) summary
    cl21456
    Location:42 → 97
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    cl25732
    Location:3 → 210
    SMC_N; RecF/RecN/SMC N terminal domain

  7. XM_023645614.1 → XP_023501382.1  coiled-coil domain-containing protein 83 isoform X1

    UniProtKB/TrEMBL
    F6XWA1
    Conserved Domains (1) summary
    cl25732
    Location:33 → 253
    SMC_N; RecF/RecN/SMC N terminal domain

  8. XM_014741623.2 → XP_014597109.1  coiled-coil domain-containing protein 83 isoform X2

    Conserved Domains (2) summary
    cl21456
    Location:42 → 97
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    cl25732
    Location:3 → 210
    SMC_N; RecF/RecN/SMC N terminal domain

  9. XM_005611995.3 → XP_005612052.1  coiled-coil domain-containing protein 83 isoform X1

    See identical proteins and their annotated locations for XP_005612052.1

    UniProtKB/TrEMBL
    F6XWA1
    Related
    ENSECAP00000021393.1, ENSECAT00000025699.4
    Conserved Domains (1) summary
    cl25732
    Location:33 → 253
    SMC_N; RecF/RecN/SMC N terminal domain

  10. XM_023645616.1 → XP_023501384.1  coiled-coil domain-containing protein 83 isoform X2

    Conserved Domains (2) summary
    cl21456
    Location:42 → 97
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    cl25732
    Location:3 → 210
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
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