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PTGR2 prostaglandin reductase 2 [ Equus caballus (horse) ]

Gene ID: 100050600, updated on 18-Sep-2024

Summary

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Gene symbol
PTGR2
Gene description
prostaglandin reductase 2
See related
Ensembl:ENSECAG00000013284
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PTGR2 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 24 NC_009167.3 (19376817..19399823)

Chromosome 24 - NC_009167.3Genomic Context describing neighboring genes Neighboring gene mitotic deacetylase associated SANT domain protein Neighboring gene UPF0461 protein C5orf24 homolog pseudogene Neighboring gene zinc finger protein 410 Neighboring gene FAM161 centrosomal protein B Neighboring gene coenzyme Q6, monooxygenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009167.3 Chromosome 24 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009167.3 Reference EquCab3.0 Primary Assembly

    Range
    19376817..19399823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001489999.6 → XP_001490049.1  prostaglandin reductase 2 isoform X1

    See identical proteins and their annotated locations for XP_001490049.1

    UniProtKB/TrEMBL
    F6T1P0
    Conserved Domains (2) summary
    cd08293
    Location:1 → 345
    PTGR2; Prostaglandin reductase
    COG2130
    Location:2 → 347
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

  2. XM_023628076.1 → XP_023483844.1  prostaglandin reductase 2 isoform X3

    Conserved Domains (1) summary
    cl16912
    Location:1 → 288
    MDR; Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

  3. XM_005605310.3 → XP_005605367.1  prostaglandin reductase 2 isoform X1

    See identical proteins and their annotated locations for XP_005605367.1

    UniProtKB/TrEMBL
    F6T1P0
    Conserved Domains (2) summary
    cd08293
    Location:1 → 345
    PTGR2; Prostaglandin reductase
    COG2130
    Location:2 → 347
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

  4. XM_005605309.3 → XP_005605366.1  prostaglandin reductase 2 isoform X1

    See identical proteins and their annotated locations for XP_005605366.1

    UniProtKB/TrEMBL
    F6T1P0
    Related
    ENSECAP00000010981.2, ENSECAT00000013799.3
    Conserved Domains (2) summary
    cd08293
    Location:1 → 345
    PTGR2; Prostaglandin reductase
    COG2130
    Location:2 → 347
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

  5. XM_005605312.3 → XP_005605369.1  prostaglandin reductase 2 isoform X2

    See identical proteins and their annotated locations for XP_005605369.1

    Conserved Domains (1) summary
    cd08293
    Location:1 → 294
    PTGR2; Prostaglandin reductase

  6. XM_005605311.3 → XP_005605368.1  prostaglandin reductase 2 isoform X1

    See identical proteins and their annotated locations for XP_005605368.1

    UniProtKB/TrEMBL
    F6T1P0
    Conserved Domains (2) summary
    cd08293
    Location:1 → 345
    PTGR2; Prostaglandin reductase
    COG2130
    Location:2 → 347
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
Nucleotide Protein
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