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SDSL serine dehydratase like [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100028443, updated on 8-May-2024

Summary

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Gene symbol
SDSL
Gene description
serine dehydratase like
See related
EnsemblRapid:ENSMODG00000003565
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See SDSL in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (40850686..40871599, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (495733931..495753419, complement)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103105872 Neighboring gene LIM homeobox 5 Neighboring gene uncharacterized LOC107651995 Neighboring gene L-serine dehydratase/L-threonine deaminase Neighboring gene serine dehydratase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine ammonia-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine dehydratase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    40850686..40871599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007490000.2 → XP_007490062.1  serine dehydratase-like

    See identical proteins and their annotated locations for XP_007490062.1

    UniProtKB/TrEMBL
    F7G139
    Conserved Domains (2) summary
    pfam00291
    Location:18 → 310
    PALP; Pyridoxal-phosphate dependent enzyme
    cl00342
    Location:17 → 326
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

  2. XM_056821694.1 → XP_056677672.1  serine dehydratase-like

    UniProtKB/TrEMBL
    F7G139
    Related
    ENSMODP00000004355.2, ENSMODT00000004447.4

  3. XM_056821693.1 → XP_056677671.1  serine dehydratase-like

    UniProtKB/TrEMBL
    F7G139

  4. XM_007490001.3 → XP_007490063.1  serine dehydratase-like

    See identical proteins and their annotated locations for XP_007490063.1

    UniProtKB/TrEMBL
    F7G139
    Conserved Domains (2) summary
    pfam00291
    Location:18 → 310
    PALP; Pyridoxal-phosphate dependent enzyme
    cl00342
    Location:17 → 326
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

  5. XM_001378439.4 → XP_001378476.2  serine dehydratase-like

    See identical proteins and their annotated locations for XP_001378476.2

    UniProtKB/TrEMBL
    F7G139
    Conserved Domains (2) summary
    pfam00291
    Location:18 → 310
    PALP; Pyridoxal-phosphate dependent enzyme
    cl00342
    Location:17 → 326
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

  6. XM_056821689.1 → XP_056677667.1  serine dehydratase-like

    UniProtKB/TrEMBL
    F7G139

  7. XM_056821690.1 → XP_056677668.1  serine dehydratase-like

    UniProtKB/TrEMBL
    F7G139

  8. XM_056821691.1 → XP_056677669.1  serine dehydratase-like

    UniProtKB/TrEMBL
    F7G139

  9. XM_056821692.1 → XP_056677670.1  serine dehydratase-like

    UniProtKB/TrEMBL
    F7G139
Nucleotide Protein
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