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SHPRH SNF2 histone linker PHD RING helicase [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100026682, updated on 8-May-2024

Summary

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Gene symbol
SHPRH
Gene description
SNF2 histone linker PHD RING helicase
See related
EnsemblRapid:ENSMODG00000016900
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See SHPRH in Genome Data Viewer
Location:
chromosome: 2
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (424585572..424708311, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (424695589..424812843, complement)

Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene EPM2A glucan phosphatase, laforin Neighboring gene cyclin-Q-like Neighboring gene F-box protein 30 Neighboring gene FUN14 domain-containing protein 1-like Neighboring gene uncharacterized LOC103102522 Neighboring gene glutamate metabotropic receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase SHPRH
Names
SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077228.1 Reference mMonDom1.pri

    Range
    424585572..424708311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001370655.4 → XP_001370692.2  E3 ubiquitin-protein ligase SHPRH

    Related
    ENSMODP00000053105.2, ENSMODT00000075276.2
Nucleotide Protein
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