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PTPN13 protein tyrosine phosphatase non-receptor type 13 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100014045, updated on 6-Jun-2024

Summary

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Gene symbol
PTPN13
Gene description
protein tyrosine phosphatase non-receptor type 13
See related
EnsemblRapid:ENSMODG00000020762
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See PTPN13 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
50
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 6 NC_077232.1 (267205114..267448568, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 5 NC_008805.1 (54506626..54702009, complement)

Chromosome 6 - NC_077232.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C4orf36 Neighboring gene solute carrier family 10 member 6 Neighboring gene mitogen-activated protein kinase 10 Neighboring gene Rho GTPase activating protein 24 Neighboring gene helicase, POLQ like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol 3-kinase regulatory subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 13
Names
protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077232.1 Reference mMonDom1.pri

    Range
    267205114..267448568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056803189.1 → XP_056659167.1  tyrosine-protein phosphatase non-receptor type 13 isoform X6

    UniProtKB/TrEMBL
    A0A5F8H308
    Related
    ENSMODP00000083355.1, ENSMODT00000143087.1

  2. XM_056803186.1 → XP_056659164.1  tyrosine-protein phosphatase non-receptor type 13 isoform X4

    UniProtKB/TrEMBL
    A0A5F8H308
    Related
    ENSMODP00000067633.1, ENSMODT00000100278.1

  3. XM_056803185.1 → XP_056659163.1  tyrosine-protein phosphatase non-receptor type 13 isoform X3

    UniProtKB/TrEMBL
    A0A5F8H308

  4. XM_056803181.1 → XP_056659159.1  tyrosine-protein phosphatase non-receptor type 13 isoform X1

    UniProtKB/TrEMBL
    F6ZYU4
    Related
    ENSMODP00000059412.2, ENSMODT00000075738.2

  5. XM_056803194.1 → XP_056659172.1  tyrosine-protein phosphatase non-receptor type 13 isoform X11

    UniProtKB/TrEMBL
    A0A5F8H308

  6. XM_056803193.1 → XP_056659171.1  tyrosine-protein phosphatase non-receptor type 13 isoform X10

    UniProtKB/TrEMBL
    A0A5F8GMX0

  7. XM_056803192.1 → XP_056659170.1  tyrosine-protein phosphatase non-receptor type 13 isoform X9

    UniProtKB/TrEMBL
    F6ZYU4

  8. XM_056803195.1 → XP_056659173.1  tyrosine-protein phosphatase non-receptor type 13 isoform X12

    UniProtKB/TrEMBL
    A0A5F8G3A7

  9. XM_056803191.1 → XP_056659169.1  tyrosine-protein phosphatase non-receptor type 13 isoform X8

    UniProtKB/TrEMBL
    A0A5F8G3A7
    Related
    ENSMODP00000041905.2, ENSMODT00000080442.2

  10. XM_056803190.1 → XP_056659168.1  tyrosine-protein phosphatase non-receptor type 13 isoform X7

    UniProtKB/TrEMBL
    A0A5F8G3A7

  11. XM_056803187.1 → XP_056659165.1  tyrosine-protein phosphatase non-receptor type 13 isoform X5

    UniProtKB/TrEMBL
    A0A5F8GMX0

  12. XM_056803184.1 → XP_056659162.1  tyrosine-protein phosphatase non-receptor type 13 isoform X2

    UniProtKB/TrEMBL
    A0A5F8GMX0
    Related
    ENSMODP00000054208.2, ENSMODT00000074415.2

  13. XM_056803182.1 → XP_056659160.1  tyrosine-protein phosphatase non-receptor type 13 isoform X1

    UniProtKB/TrEMBL
    F6ZYU4
    Related
    ENSMODP00000025968.4, ENSMODT00000026433.5

  14. XM_056803188.1 → XP_056659166.1  tyrosine-protein phosphatase non-receptor type 13 isoform X5

    UniProtKB/TrEMBL
    A0A5F8GMX0
    Related
    ENSMODP00000067815.1, ENSMODT00000151072.1
Nucleotide Protein
Heading Accession and Version

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