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ZBTB5 zinc finger and BTB domain containing 5 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100013428, updated on 8-May-2024

Summary

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Gene symbol
ZBTB5
Gene description
zinc finger and BTB domain containing 5
See related
EnsemblRapid:ENSMODG00000060039 EnsemblRapid:ENSMODG00000072537
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 7 NC_077233.1 (262277218..262318378)
103 previous assembly MonDom5 (GCF_000002295.2) 6 NC_008806.1 (29038884..29091648, complement)

Chromosome 7 - NC_077233.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase I subunit E Neighboring gene uncharacterized LOC130455644 Neighboring gene glyoxylate and hydroxypyruvate reductase Neighboring gene uncharacterized LOC103099845

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077233.1 Reference mMonDom1.pri

    Range
    262277218..262318378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056806708.1 → XP_056662686.1  zinc finger and BTB domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7BF10

  2. XM_007498006.3 → XP_007498068.1  zinc finger and BTB domain-containing protein 5 isoform X3

    See identical proteins and their annotated locations for XP_007498068.1

    UniProtKB/TrEMBL
    A0A5F8G2P4
    Related
    ENSMODP00000061501.1, ENSMODT00000130770.1
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

  3. XM_056806709.1 → XP_056662687.1  zinc finger and BTB domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    F7BF10

  4. XM_056806712.1 → XP_056662690.1  zinc finger and BTB domain-containing protein 5 isoform X3

  5. XM_056806711.1 → XP_056662689.1  zinc finger and BTB domain-containing protein 5 isoform X3

    Related
    ENSMODP00000066298.1, ENSMODT00000098284.1

  6. XM_016423805.2 → XP_016279291.1  zinc finger and BTB domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8G2P4
    Related
    ENSMODP00000079385.1, ENSMODT00000134364.1
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

  7. XM_016423803.2 → XP_016279289.1  zinc finger and BTB domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A5F8G2P4

  8. XM_016423804.2 → XP_016279290.1  zinc finger and BTB domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8G2P4
    Related
    ENSMODP00000081735.1, ENSMODT00000140572.1
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

  9. XM_016423809.2 → XP_016279295.1  zinc finger and BTB domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8G2P4
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

  10. XM_016423811.2 → XP_016279297.1  zinc finger and BTB domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8G2P4
    Conserved Domains (4) summary
    smart00225
    Location:25 → 119
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:614 → 634
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:626 → 651
    zf-H2C2_2; Zinc-finger double domain

RNA

  1. XR_001623306.2 RNA Sequence

Nucleotide Protein
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