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WIPI2 WD repeat domain, phosphoinositide interacting 2 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100011149, updated on 8-May-2024

Summary

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Gene symbol
WIPI2
Gene description
WD repeat domain, phosphoinositide interacting 2
See related
EnsemblRapid:ENSMODG00000070910
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See WIPI2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 7 NC_077233.1 (212158090..212192735, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 6 NC_008806.1 (81704187..81738944)

Chromosome 7 - NC_077233.1Genomic Context describing neighboring genes Neighboring gene trinucleotide repeat containing 18 Neighboring gene uncharacterized LOC130455620 Neighboring gene solute carrier family 29 member 4 Neighboring gene monocyte to macrophage differentiation associated 2 Neighboring gene microRNA mir-7330 Neighboring gene Rap associating with DIL domain Neighboring gene adaptor related protein complex 5 subunit zeta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat domain phosphoinositide-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077233.1 Reference mMonDom1.pri

    Range
    212158090..212192735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001363280.4 → XP_001363317.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A5F8GBU1
    Conserved Domains (3) summary
    COG2319
    Location:21 → 272
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:143 → 182
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:180 → 375
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_001363114.4 → XP_001363151.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A5F8GBU1, F6UUB2
    Related
    ENSMODP00000072607.1, ENSMODT00000129112.1
    Conserved Domains (3) summary
    COG2319
    Location:21 → 272
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:143 → 182
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:180 → 375
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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