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HTR2C 5-hydroxytryptamine receptor 2C [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100011052, updated on 8-May-2024

Summary

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Gene symbol
HTR2C
Gene description
5-hydroxytryptamine receptor 2C
See related
EnsemblRapid:ENSMODG00000074388
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See HTR2C in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) X NC_077235.1 (6557609..6706952)
103 previous assembly MonDom5 (GCF_000002295.2) X NC_008809.1 (67640038..67784836, complement)

Chromosome X - NC_077235.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-7381 Neighboring gene DDB1- and CUL4-associated factor 7-like Neighboring gene microRNA mir-12408 Neighboring gene uncharacterized LOC103096271 Neighboring gene microRNA mir-7380 Neighboring gene microRNA mir-12407 Neighboring gene microRNA mir-7379 Neighboring gene microRNA mir-7378 Neighboring gene microRNA mir-12406 Neighboring gene interleukin 13 receptor subunit alpha 2 Neighboring gene vomeronasal 2 receptor 656 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 2C
Names
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077235.1 Reference mMonDom1.pri

    Range
    6557609..6706952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007507534.3 → XP_007507596.1  5-hydroxytryptamine receptor 2C isoform X1

    See identical proteins and their annotated locations for XP_007507596.1

    UniProtKB/TrEMBL
    F7BES5
    Related
    ENSMODP00000006204.4, ENSMODT00000006334.5
    Conserved Domains (2) summary
    pfam00001
    Location:74 → 367
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:68 → 249
    7tm_4; Olfactory receptor

  2. XM_007507535.3 → XP_007507597.1  5-hydroxytryptamine receptor 2C isoform X1

    See identical proteins and their annotated locations for XP_007507597.1

    UniProtKB/TrEMBL
    F7BES5
    Conserved Domains (2) summary
    pfam00001
    Location:74 → 367
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:68 → 249
    7tm_4; Olfactory receptor

  3. XM_056809476.1 → XP_056665454.1  5-hydroxytryptamine receptor 2C isoform X1

    UniProtKB/TrEMBL
    F7BES5

  4. XM_001364650.4 → XP_001364687.2  5-hydroxytryptamine receptor 2C isoform X2

    UniProtKB/TrEMBL
    A0A5F8G9X4
    Related
    ENSMODP00000073331.1, ENSMODT00000127668.1
    Conserved Domains (2) summary
    pfam00001
    Location:57 → 350
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:51 → 232
    7tm_4; Olfactory receptor
Nucleotide Protein
Heading Accession and Version

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