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RNFT1 ring finger protein, transmembrane 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100010510, updated on 6-Jun-2024

Summary

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Gene symbol
RNFT1
Gene description
ring finger protein, transmembrane 1
See related
EnsemblRapid:ENSMODG00000014301
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See RNFT1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (179189984..179208452)
103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (172061868..172080080)

Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene GTPase HRas-like Neighboring gene ufm1-specific protease 2-like Neighboring gene ribosomal protein S6 kinase B1 Neighboring gene tubulin delta 1 Neighboring gene microRNA mir-21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNFT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077228.1 Reference mMonDom1.pri

    Range
    179189984..179208452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007481771.3 → XP_007481833.2  E3 ubiquitin-protein ligase RNFT1 isoform X1

    UniProtKB/TrEMBL
    F6W4Q5
    Related
    ENSMODP00000081510.1, ENSMODT00000118102.1

  2. XM_007481772.3 → XP_007481834.2  E3 ubiquitin-protein ligase RNFT1 isoform X2

    UniProtKB/TrEMBL
    F6W4Q5
Nucleotide Protein
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