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spryd4 SPRY domain containing 4 [ Danio rerio (zebrafish) ]

Gene ID: 100005939, updated on 12-Sep-2024

Summary

Official Symbol
spryd4provided by ZNC
Official Full Name
SPRY domain containing 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-180
See related
Ensembl:ENSDARG00000023309 AllianceGenome:ZFIN:ZDB-GENE-040718-180
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:92875
Summary
Orthologous to human SPRYD4 (SPRY domain containing 4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See spryd4 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (21159163..21162762)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (21127078..21130677)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene carnitine palmitoyltransferase 2 Neighboring gene porcupine O-acyltransferase Neighboring gene glutaminase 2a (liver, mitochondrial) Neighboring gene collagen, type II, alpha 1a Neighboring gene cryptochrome circadian regulator 3a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
SPRY domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002477.1NP_001002477.1  SPRY domain-containing protein 4

    See identical proteins and their annotated locations for NP_001002477.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076335
    UniProtKB/TrEMBL
    A0A8M1N0G1, Q6DGK7
    Related
    ENSDARP00000037635.6, ENSDART00000033491.7
    Conserved Domains (1) summary
    cd12903
    Location:47215
    SPRY_PRY_SPRYD4; PRY/SPRY domain containing protein 4 (SPRYD4)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    21159163..21162762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394720.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    196480..200093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)