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skida1 SKI/DACH domain containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 100003232, updated on 27-Mar-2024

Summary

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Official Symbol
skida1provided by ZNC
Official Full Name
SKI/DACH domain containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-63
See related
AllianceGenome:ZFIN:ZDB-GENE-050208-63
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:7137453
Summary
Is expressed in several structures, including central nervous system; midbrain neural keel; neural plate; neural tube; and presumptive telencephalon. Orthologous to human SKIDA1 (SKI/DACH domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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See skida1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (17134481..17140056, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (16990062..16995334, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 3 Neighboring gene phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a Neighboring gene MLLT10 histone lysine methyltransferase DOT1L cofactor Neighboring gene COMM domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  

General protein information

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Preferred Names
protein DLN-1; SKI/DACH domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    17134481..17140056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001342808.7 → XP_001342844.2  SKI/DACH domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8M1PSP4
    Conserved Domains (2) summary
    pfam02437
    Location:13 → 98
    Ski_Sno; SKI/SNO/DAC family
    pfam15223
    Location:433 → 788
    DUF4584; Domain of unknown function (DUF4584)
Nucleotide Protein Strain
Heading Accession and Version

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