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Report for CCDS35028.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35028.1 Withdrawn Homo sapiens 9 ANKRD20A2P 22 109 92 CCDS HistoryNCBI Gene:441430Re-query CCDS DB by CCDS ID:35028.1Re-query CCDS DB by GeneID:441430See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Sequence IDs included in CCDS 35028.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377601.2 ENSP00000366826.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377601.2Link to Ensembl Protein Viewer:ENSP00000366826.2Re-query CCDS DB by Nucleotide ID:ENST00000377601Re-query CCDS DB by Protein ID:ENSP00000366826
Original member NCBI NM_001012421.1 NP_001012421.1 Removed alive Link to Nucleotide Sequence:NM_001012421.1Link to Protein Sequence:NP_001012421.1Re-query CCDS DB by Nucleotide ID:NM_001012421Re-query CCDS DB by Protein ID:NP_001012421Link to BLAST:NP_001012421.1

Chromosomal Locations for CCDS 35028.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 40223397 40223599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40226907 40227021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40227184 40227357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40231243 40231349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40232396 40232533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40235133 40235188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40241729 40241759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40244446 40244515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40248464 40248548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40251257 40251285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40251377 40251449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40257420 40257490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40261549 40261712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40263140 40263320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40264491 40265465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2472 nt):
ATGAAGTTATTCGGCTTCGGGAGCCGCAGGGGCCAGACGGCCCAGGGCTCCATAGACCACGTCTACACGG
GTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCAGCTGTCAAAGGCGACGCCGC
GGAGGTGGAGCGCTGCTTGGCGCGCAGGAGCGGAGACCTGGACGCCCTGGACAAGCAGCACAGAACTGCT
CTACACTTGGCCTGTGCCAGTGGCCATGTGCAAGTGGTCACTCTCCTGGTTAACAGAAAATGCCAGATTG
ATGTCTGTGACAAAGAAAACAGAACGCCTTTGATACAGGCTGTCCATTGCCAGGAAGAGGCTTGTGCCGT
TATTCTGCTGGAACATGGCGCCAATCCAAACCTTAAGGATATCTACGGCAACACTGCTCTCCATTATGCC
GTGTATAGTGAGAGCACCTCACTGGCAGAAAAACTGCTTTCCCATGGTGCACATATTGAAGCACTGGACA
AGGACAATAATACCCCACTTTTATTTGCTATAATTTGCAAGAAAGAGAAAATGGTGGAATTTTTATTGAA
AAGGAAAGCAAGTTCACATGCCGTTGATAGGCTGAGACGGTCAGCTCTCATGCTTGCTGTATACTATGAC
TCACCAGGTATTGTCAATATCCTTCTTAAGCAAAATATTGATGTCTTCGCTCAAGACATGTGTGGACGAG
ATGCAGAAGATTATGCTATTTCTCATCATTTGACAAAAATTCAACAACAAATTTTGGAACATAAAAAGAA
GATACTTAAAAAGGAGAAATCAGATGTTGGAAGTTCTGATGAATCTGCAGTCAGCATTTTCCATGAACTG
CGTGTGGATTCATTGCCTGCATCGGATGACAAAGACTTGAATGTTGCTACTAAGCAGTGTGTCCCCGAGA
AAGTGTCAGAGCCTTTACCTGGATCTTCGCATGAAAAAGGAAACAGAATAGTCAATGGACAAGGAGAAGG
GCCTCCTGCAAAACATCCTTCCTTGAAGCCTAGCACTGAAGTAGAAGATCCTGCTGTGAAAGGAGCAGTA
CAAAGAAAGAATGTACAGACATTGAGAGCAGAACAAGCCTTACCAGTGGCTTCAGAGGAAGAGCAAGAAA
GGCATGAAAGAAGTGAAAAGAAGCAACCACAGGTCAAAGAAGGAAATAATACAAACAAAAGTGAAAAAAT
ACAACTTTCAGAAAATATATGTGATAGTACATCTTCTGCTGCTGCTGGCAGATTAACCCAACAAAGAAAG
ATTGGGAAAACGTATCCTCAGCAATTTCCCAAGAAGCTGAAGGAAGAGCATGATAGATGCACCTTAAAAC
AAGAAAATGAAGAAAAAACAAATGTTAATATGCTGTACAAAAAAAATAGAGAAGAATTAGAAAGGAAAGA
GAAACAATATAAGAAAGAAGTTGAAGCAAAACAACTTGAACCAACTGTTCAGTCACTAGAGATGAAATCA
AAGACTGCAAGAAATACTCCAAATCGGGATTTTCATAATCATGAAGAAATGAAAGGTCTGATGGATGAAA
ATTGCATTTTGAAGGCAGATATTGCTATACTCAGACAGGAAATATGTACAATGAAAAATGACAACTTGGA
AAAAGAAAATAAATATCTTAAGGACATTAAAATTGTTAAAGAAACAAATGCTGCCCTTGAAAAGTATATA
AAACTCAATGAGGAAATGATAACAGAAACAGCATTCCGGTATCAACAAGAGCTTAATGATCTCAAGGCTG
AGAATACAAGGCTCAATGCCGAACTGTTGAAGGAAAAAGAAAGCAAGAAAAGACTGGAAGCTGACATTGA
ATCTTATCAGTCTAGACTGGCTGCTGCTATAAGCAAACACAGTGAAAGTGTGAAAACAGAAAGAAACCTA
AAACTTGCTTTAGAGAGAACACGAGATGTTTCTGTACAAGTAGAAATGAGTTCTGCTATTTCCAAAGTAA
AAGATGAGAATGAGTTTCTTACTGAACAACTTTCTGAAACACAAATTAAATTCAATGCCTTAAAAGATAA
GTTCCGTAAGACAAGAGATAGTCTCAGAAAAAAGTCATTGGCTTTAGAAACTGTACAAAACGACCTAAGC
CAAACACAGCAGCAAACACAGGAAATGAAAGAGATGTATCAAAATGCAGAAGCTAAAGTGAATAATTCCA
CTGGAAAGTGGAACTGTGTAGAAGAGAGGATATGTCACCTCCAACGTGAAAATGCGTGGCTTGTACAGCA
ACTAGATGACGTTCATCAGAAAGAGGATCATAAAGAGATAGTAACTAATATCCAAAGAGGCTTTATTGAG
AGTGGAAAGAAAGACCTCGTGCTAGAAGAGAAAAGTAAGAAGCTAATGAATGAATGTGATCATTTAAAAG
AAAGTCTCTTTCAGTATGAGAGAGAGAAAACAGAAGGAGTAGTAAGTATCAAGGAAGATAAATATTTTCA
AACTTCTAGAAAGAAAATTTAA

Translation (823 aa):
MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDLDALDKQHRTA
LHLACASGHVQVVTLLVNRKCQIDVCDKENRTPLIQAVHCQEEACAVILLEHGANPNLKDIYGNTALHYA
VYSESTSLAEKLLSHGAHIEALDKDNNTPLLFAIICKKEKMVEFLLKRKASSHAVDRLRRSALMLAVYYD
SPGIVNILLKQNIDVFAQDMCGRDAEDYAISHHLTKIQQQILEHKKKILKKEKSDVGSSDESAVSIFHEL
RVDSLPASDDKDLNVATKQCVPEKVSEPLPGSSHEKGNRIVNGQGEGPPAKHPSLKPSTEVEDPAVKGAV
QRKNVQTLRAEQALPVASEEEQERHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRK
IGKTYPQQFPKKLKEEHDRCTLKQENEEKTNVNMLYKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKS
KTARNTPNRDFHNHEEMKGLMDENCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYI
KLNEEMITETAFRYQQELNDLKAENTRLNAELLKEKESKKRLEADIESYQSRLAAAISKHSESVKTERNL
KLALERTRDVSVQVEMSSAISKVKDENEFLTEQLSETQIKFNALKDKFRKTRDSLRKKSLALETVQNDLS
QTQQQTQEMKEMYQNAEAKVNNSTGKWNCVEERICHLQRENAWLVQQLDDVHQKEDHKEIVTNIQRGFIE
SGKKDLVLEEKSKKLMNECDHLKESLFQYEREKTEGVVSIKEDKYFQTSRKKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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