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Report for CCDS92950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92950.1 Public Homo sapiens 2 NYAP2 24 110 108 CCDS HistoryNCBI Gene:57624Re-query CCDS DB by CCDS ID:92950.1Re-query CCDS DB by GeneID:57624See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92950.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272907.8 ENSP00000272907.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272907.8Link to Ensembl Protein Viewer:ENSP00000272907.7Re-query CCDS DB by Nucleotide ID:ENST00000272907Re-query CCDS DB by Protein ID:ENSP00000272907
Original member Current member NCBI NM_001371273.1 NP_001358202.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001371273.1Link to Protein Sequence:NP_001358202.1Re-query CCDS DB by Nucleotide ID:NM_001371273Re-query CCDS DB by Protein ID:NP_001358202Link to BLAST:NP_001358202.1

Chromosomal Locations for CCDS 92950.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 225408881 225409101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225513371 225513672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225581941 225583035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225626917 225627126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225651432 225651535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225698317 225698544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2160 nt):
ATGATATCCTCCAAGATGATGAGTTCTAATCCTGAGGAAGACCCTTTGGACACATTTCTCCAGTACATTG
AGGATATGGGGATGAAGGCCTATGATGGCTTGGTTATTCAGAATGCGTCAGATATTGCTCGAGAGAATGA
TCGCTTGAGAAATGAAACTAACCTAGCCTATTTGAAAGAGAAGAATGAAAAACGCCGAAGACAAGAAGAA
GCAATAAAGCGCATAGGTGGAGAAGTAGGGCGAGGCCACGAAGGAAGTTACGTGGGCAAACATTTCCGCA
TGGGATTCATGACAATGCCTGCTCCTCAGGACAGACTTCCCCATCCTTGCTCCAGTGGCTTTTCTGTGAG
ATCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAACCACCA
CCCAAACCCAAGAGGGACCCCAGCACCAAGCTGAGCACCTCATCAGAGACAGTCAGCAGCACTGCAGCCA
GTAAGAGCGGGAAAACCCCTGAGAGGACTGAAGCGTCAGCTAAACCAAGACCCCACAGCGATGAATATTC
CAAGAAGATTCCTCCTCCCAAACCGAAGCGAAATCCGAACACTCAGCTGAGCACATCTTTCGATGAAACG
TACATCAAAAAGCATGGGCCCCGGAGGACGTCGCTGCCGCGGGACTCCTCCTTGTCCCAGATGGGCAGCC
CCGCGGGAGACCCCGAGGAAGAGGAGCCCGTGTACATCGAGATGGTGGGGAACATTCTCAGAGACTTCAG
GAAGGAGGACGATGACCAGAGCGAGGCCGTCTACGAGGAAATGAAGTACCCTATCTTTGACGACTTGGGC
CAAGACGCCAAATGTGACTTCGACCATCACAGCTGTTCTTCGCAGTGTGCTACTCCCACGGTGCCTGACT
TGGACTTCGCCAAGGCCTCAGTGCCATGCCCCCCCAAGGGGCTGCTTTGCGACATCCCTCCGCCCTTCCC
CAACCTGCTTTCTCACAGACCCCCGCTGCTGGTATTTCCCCCCGCCCCCGTGCATTGCTCCCCCAACTCC
GACGAGTCCCCGCTTACCCCTCTGGAGGTCACGAAGCTTCCCGTGCTGGAAAACGTGTCTTACATGAAAC
AGCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCA
GGCCGCGGCCCTGGGACCTGCCTCTGCCACCCCTGCGCTCTCCTCGTCGCCCCCACCCCCGTCTACGCTG
TACCGAACCCAGTCTCCCCATGGCTACCCTAAAAGTCACTCCACCTCTCCCTCCCCCGTCAGCATGGGGA
GGTCCCTGACTCCCCTGAGCCTCAAAAGGCCTCCCCCTTACGACGCTGTGCATTCGGGCAGCCTCTCAAG
GAGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGATGGTCAACGCC
GCGGTGAACACCTACGGGGCAGCCCCGGGTGGCTCCCGGTCCCGGACACCCACGAGCCCGCTGGAGGAGC
TGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCC
TGCAGAGAAATCAACAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAAC
AAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGGATGGAACAC
CAGGGACACCTGTGGTCACCAGTCGACTAGGAAGATGCTCTGTGAGCCCCACCTTGTTAGCGGGAAACCA
CAGTTCAGAGCCTAAAGTAAGCTGCAAATTAGGCCGGTCTGCGTCGACGTCAGGTGTGCCTCCTCCATCA
GTCACTCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTGGCATGCATGCAGTGGTTTCATGGAG
ACCATACAATGCTTGAGATGATTGAGAAAAAGCGTTGCTTGTGCAAGGAAATAAAGGCTAGACAGAAAAC
GGAAAAGGGCCTTTGCAAACAGGATAGCATGCCTATCTTGCCCAGCTGGAAGAAGAATGCAGGTGCCAAG
AAGTACAGCCCTCCACCGTATTCTAAACAGCAAACGGTATTCTGGGATACTGCCATATGA

Translation (719 aa):
MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEE
AIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPP
PKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDET
YIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLG
QDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNS
DESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL
YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNA
AVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDN
KERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPS
VTPLRQSSDLQQSQVACMQWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMPILPSWKKNAGAK
KYSPPPYSKQQTVFWDTAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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