NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92477.1 Public Homo sapiens 19 CBARP 24 110 108 CCDS HistoryNCBI Gene:255057Re-query CCDS DB by CCDS ID:92477.1Re-query CCDS DB by GeneID:255057See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92477.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650044.2 ENSP00000497208.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650044.2Link to Ensembl Protein Viewer:ENSP00000497208.1Re-query CCDS DB by Nucleotide ID:ENST00000650044Re-query CCDS DB by Protein ID:ENSP00000497208
Original member Current member NCBI NM_001393918.1 NP_001380847.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393918.1Link to Protein Sequence:NP_001380847.1Re-query CCDS DB by Nucleotide ID:NM_001393918Re-query CCDS DB by Protein ID:NP_001380847Link to BLAST:NP_001380847.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001380847.1 705 Q8N350-3 705 100% 0 0

Chromosomal Locations for CCDS 92477.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1229179 1230142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1231101 1231275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1233426 1233636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1234191 1234331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1234571 1234742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1235001 1235145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1235501 1235565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1235779 1235918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1235996 1236100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2118 nt):
ATGCAGCCCACAGCCACCATGGCCACAGCCGCCACCACCACCACCACCACCACTGCCACAGTAGCCCTGA
CGACGTCGTGGGACAATGCCACTGGACGCCCCACGGCAGAGCCAGACCCCATCCTGGACAACTACGTGCT
GCTGGTGGTGGTGATGTCGCTGTTCGTGGGGGGCACGCTGGTGGTGTTGTCTGGCGTCCTGCTCCTCTGC
AAGCGCTGCTGGGACGTCCACCAGCGCCTCAACAGGGCCATGGAGGAAGCGGAGAAGACCACCACCACCT
ACCTGGACAACGGCACCCACCCAGCCCAAGACCCCGACTTCCGGGGAGAGGACCCCGAGTGCCAGGATGC
GGAGACCGAACGCTTCCTGTCCACCAGCTCCACGGGCCGCCGGGTCTCCTTCAATGAGGCGGCGCTGTTT
GAGCAGAGCCGCAAGACGCAGGACAAGGGTCGCCGGTACACACTGACGGAGGGGGACTTCCACCACCTGA
AGAATGCCCGGCTCACGCACCTGCACCTGCCGCCCCTCAAGATTGTCACCATCCACGAGTGTGACTCAGG
CGAGGCCAGCTCAGCCACCACGCCCCACCCGGCCACCTCTCCCAAGGCCACTCTGGCCATCTTCCAGCCC
CCGGGGAAGGCCCTCACCGGCCGCTCTGTGGGCCCCAGCTCCGCCCTGCCAGGTGACCCCTACAACTCAG
CCGCGGGCGCCACTGACTTCGCAGAGATCAGCCCCTCGGCATCTAGCGACTCTGGGGAAGGCACCTCGTT
GGATGCCGGTACCAGGAGCACCAAGGCTGGAGGGCCCGGGGCTGCAGCAGGGCCTGGGGAGGCGGGCCCG
GGATCCGGGGCAGGTACCGTTCTGCAGTTCCTCACCCGCCTGCGCCGCCATGCCAGCCTGGATGGGGCCA
GCCCCTATTTCAAGGTCAAGAAGTGGAAGCTGGAGCCCAGCCAGCGGGCAGCCAGTCTGGACACGAGAGG
TTCCCCCAAGCGGCACCACTTCCAGCGGCAGCGGGCAGCCAGTGAGAGCACGGAGCAGGAGGAGGGGGAT
GCCCCCCAGGAGGACTTCATCCAGTACATTGCCCGGGCGGGCGACGCCGTGGCCTTCCCGCACCCCCGCC
CCTTTCTGGCCAGCCCGCCCCCTGCTCTCGGCAGGCTAGAGGCGGCCGAGGCAGCGGGAGGAGCGAGCCC
CGATTCCCCCCCGGAGCGCGGCGCGGGCAGCGCGGGGCCTGAGCAGCAGCAGCCGCCACTGGAGCCGGAC
GCCGAGCGGGACGCGGGCCCCGAGCAGGCCCAGACCAGCTACCGCGACCTGTGGAGCCTGCGCGCCTCGC
TTGAGCTGCATGCGGCCGCCTCGGACCACAGCAGCAGCGGCAACGACCGCGACTCGGTGCGCAGCGGCGA
CAGCTCGGGCTCAGGCTCCGGGGGCGCGGCGCCCGCCTTCCCGCCGCCCTCCCCGCCCGCGCCGCGGCCC
AAGGACGGCGAGGCGCGCCGGCTGCTGCAGATGGACAGTGGCTACGCCAGCATCGAGGGCCGCGGCGCAG
GCGACGACACCGAGCCACCTGCCGCGCCCGCCCGGCCCCGCAGCCCGCGCGCCTGGCCCCGCCGCCCGCG
CCGCGACTACAGCATCGACGAGAAGACGGACGCGCTGTTCCACGAGTTCCTGCGCCACGACCCGCACTTC
GACGACACGCCGGCTGCCGCGCGACACCGCGCCCGCGCGCACCCGCACGCCCGCAAACAGTGGCAGCGTG
GCCGGCAGCACAGCGACCCCGGCGCCCGCGCGGCCCCGGCCCTGGCCGGAACCCCGGCACCGCCTGCCGG
CGCGGCCCGACCCGCGCGTGCGCCCTTGCGGCGCGGCGACAGCGTGGACGGCCCGCCCGACGGTCGCACC
CTGGGCGGCGCCGGCGACGACCCCGCCATCCCCGTCATCGAGGAGGAGCCGGGCGGCGGGGGGTGCCCCG
GCTCGGGCCTGTGCGTCCTACCATCCGGGTCGGTGCTGGACAAGCTGGCGGCTGGCCTCGACGAGAGACT
CTTTCCGCCGCGCCTCGCCGAGCCCGTCGTGGCGACTCCCGCGTTGGTCGCCGCCGCCCCCACGTCCCCC
GACCACAGCCCGGCCTAA

Translation (705 aa):
MQPTATMATAATTTTTTTATVALTTSWDNATGRPTAEPDPILDNYVLLVVVMSLFVGGTLVVLSGVLLLC
KRCWDVHQRLNRAMEEAEKTTTTYLDNGTHPAQDPDFRGEDPECQDAETERFLSTSSTGRRVSFNEAALF
EQSRKTQDKGRRYTLTEGDFHHLKNARLTHLHLPPLKIVTIHECDSGEASSATTPHPATSPKATLAIFQP
PGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGP
GSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGD
APQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRLEAAEAAGGASPDSPPERGAGSAGPEQQQPPLEPD
AERDAGPEQAQTSYRDLWSLRASLELHAAASDHSSSGNDRDSVRSGDSSGSGSGGAAPAFPPPSPPAPRP
KDGEARRLLQMDSGYASIEGRGAGDDTEPPAAPARPRSPRAWPRRPRRDYSIDEKTDALFHEFLRHDPHF
DDTPAAARHRARAHPHARKQWQRGRQHSDPGARAAPALAGTPAPPAGAARPARAPLRRGDSVDGPPDGRT
LGGAGDDPAIPVIEEEPGGGGCPGSGLCVLPSGSVLDKLAAGLDERLFPPRLAEPVVATPALVAAAPTSP
DHSPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH