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Report for CCDS90849.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90849.1 Public Homo sapiens 1 CAMTA1 24 110 108 CCDS HistoryNCBI Gene:23261Re-query CCDS DB by CCDS ID:90849.1Re-query CCDS DB by GeneID:23261See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90849.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000476864.2 ENSP00000452319.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000476864.2Link to Ensembl Protein Viewer:ENSP00000452319.2Re-query CCDS DB by Nucleotide ID:ENST00000476864Re-query CCDS DB by Protein ID:ENSP00000452319
Current member NCBI NM_001410737.1 NP_001397666.1 Accepted alive Link to Nucleotide Sequence:NM_001410737.1Link to Protein Sequence:NP_001397666.1Re-query CCDS DB by Nucleotide ID:NM_001410737Re-query CCDS DB by Protein ID:NP_001397666Link to BLAST:NP_001397666.1

Chromosomal Locations for CCDS 90849.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 6785531 6785575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6820181 6820250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6825092 6825210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7091304 7091371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7249491 7249626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7467830 7467901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7640400 7640553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7661726 7661866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7663353 7665199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7670911 7671037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7677599 7677733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7732448 7732599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7736344 7736540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7736931 7737009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7737255 7737570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7738298 7738482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7744835 7745022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7745845 7746091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7747710 7747781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7751199 7751392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7752459 7752533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 7766459 7766522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4683 nt):
ATGTGGCGCGCGGAGGGGAAATGGCTGCCGAAAACAAGCCGGAAGAGCGTTTCCCAAAGTGTATTCTGCG
GAACTAGCACCTACTGTGTTCTCAACACCGTGCCACCTATAGAAGATGATCATGGGAACAGCAATAGTAG
TCATGTAAAAATCTTTTTACCGAAAAAGCTGCTTGAATGTCTGCCGAAATGTTCAAGTTTACCAAAAGAG
AGGCACCGCTGGAACACTAATGAGGAAATTGCAGCTTATTTAATAACATTTGAGAAACACGAAGAATGGC
TAACCACCTCCCCTAAGACAAGACCACAGAATGGCTCAATGATACTCTACAACAGGAAGAAAGTGAAATA
CAGGAAAGATGGGTATTGCTGGAAAAAGAGGAAAGATGGGAAAACGACCAGAGAGGACCACATGAAACTC
AAGGTCCAGGGAGTGGAGTGCTTGTACGGCTGCTATGTCCATTCCTCCATCATCCCCACCTTCCACCGGA
GGTGCTACTGGCTCCTTCAGAACCCCGACATCGTCCTGGTGCACTACCTGAACGTGCCGGCCATCGAGGA
CTGCGGCAAGCCTTGCGGCCCCATCCTCTGCTCCATCAACACCGACAAGAAGGAGTGGGCGAAATGGACG
AAAGAAGAGCTCATCGGGCAGCTGAAACCCATGTTCCATGGCATCAAGTGGACCTGCAGCAATGGGAACA
GCAGCTCAGGCTTCTCGGTGGAACAGCTGGTGCAGCAGATCCTCGACAGCCACCAGACCAAGCCCCAGCC
GCGGACCCACAACTGCCTCTGCACCGGCAGCCTGGGAGCTGGCGGCAGCGTGCATCACAAGTGTAACAGC
GCCAAACACCGCATCATCTCGCCCAAGGTGGAGCCACGGACAGGGGGGTACGGGAGCCACTCGGAGGTGC
AGCACAATGACGTGTCGGAGGGCAAGCACGAGCACAGCCACAGCAAGGGCTCCAGCCGTGAGAAGAGGAA
CGGCAAGGTGGCCAAGCCCGTGCTCCTGCACCAGAGCAGCACCGAGGTCTCCTCCACCAACCAGGTGGAA
GTCCCCGACACCACCCAGAGCTCCCCTGTGTCCATCAGCAGCGGGCTCAACAGCGACCCGGACATGGTGG
ACAGCCCGGTGGTCACAGGTGTGTCCGGTATGGCGGTGGCCTCTGTGATGGGGAGCTTGTCCCAGAGCGC
CACGGTGTTCATGTCAGAGGTCACCAATGAGGCCGTGTACACCATGTCCCCCACCGCTGGCCCCAACCAC
CACCTCCTCTCACCTGACGCCTCTCAGGGCCTCGTCCTGGCCGTGAGCTCTGATGGCCACAAGTTCGCCT
TTCCCACCACGGGCAGCTCGGAGAGCCTGTCCATGCTGCCCACCAACGTGTCCGAAGAGCTGGTCCTCTC
CACCACCCTCGACGGTGGCCGGAAGATTCCAGAAACCACCATGAACTTTGACCCCGACTGTTTCCTTAAT
AACCCAAAGCAGGGCCAGACGTACGGGGGTGGAGGCCTGAAAGCCGAGATGGTCAGCTCCAACATCCGGC
ACTCGCCACCCGGGGAGCGGAGCTTCAGCTTTACCACCGTCCTCACCAAGGAGATCAAGACCGAGGACAC
CTCCTTCGAGCAGCAGATGGCCAAAGAAGCGTACTCCTCCTCCGCGGCGGCTGTGGCAGCCAGCTCCCTC
ACCCTGACCGCCGGCTCCAGCCTCCTGCCGTCGGGCGGCGGCCTGAGTCCCAGCACCACCCTGGAGCAGA
TGGACTTCAGCGCCATCGACTCCAACAAGGACTACACGTCCAGCTTCAGCCAGACGGGCCACAGCCCCCA
CATCCACCAGACCCCCTCCCCGAGCTTCTTCCTGCAGGACGCCAGCAAACCCCTCCCCGTCGAGCAGAAC
ACCCACAGCAGCCTGAGTGACTCTGGGGGCACCTTCGTGATGCCCACGGTGAAAACGGAGGCCTCGTCCC
AAACCAGCTCCTGCAGCGGTCACGTGGAGACGCGGATCGAGTCCACTTCCTCCCTCCACCTCATGCAGTT
CCAGGCCAACTTCCAGGCCATGACGGCAGAAGGGGAGGTCACCATGGAGACCTCGCAGGCGGCGGAAGGG
AGCGAGGTCCTGCTCAAGTCTGGGGAGCTGCAGGCTTGCAGCTCTGAGCACTACCTGCAGCCGGAGACCA
ACGGGGTAATCCGAAGCGCCGGCGGCGTCCCCATCCTCCCGGGCAACGTGGTGCAGGGACTCTACCCCGT
GGCCCAGCCCAGCCTCGGCAACGCCTCCAACATGGAGCTCAGCCTGGACCACTTTGACATCTCCTTCAGC
AACCAGTTCTCCGACCTGATCAACGACTTCATCTCCGTGGAGGGGGGCAGCAGCACCATCTATGGGCACC
AGCTGGTGTCGGGGGACAGCACGGCGCTCTCACAGTCAGAGGACGGGGCGCGGGCCCCCTTCACCCAGGC
AGAGATGTGCCTCCCCTGCTGTAGCCCCCAGCAGGGTAGCCTGCAGCTGAGCAGCTCGGAGGGCGGGGCC
AGCACCATGGCCTACATGCACGTCGCCGAGGTGGTCTCGGCCGCCTCGGCCCAGGGCACCCTAGGCATGC
TGCAGCAGAGCGGACGGGTGTTCATGGTGACCGACTACTCCCCAGAGTGGTCTTACCCAGAGGGAGGAGT
GAAGGTCCTCATCACAGGCCCGTGGCAAGAAGCCAGCAATAACTACAGCTGCCTGTTTGACCAGATCTCA
GTGCCTGCATCCCTGATTCAGCCTGGGGTGCTGCGCTGCTACTGCCCAGCCCATGACACTGGTCTTGTGA
CCCTACAAGTTGCCTTCAACAACCAGATCATCTCCAACTCGGTGGTGTTTGAGTACAAAGCCCGGGCTCT
GCCCACGCTCCCTTCCTCCCAGCACGACTGGCTGTCGTTGGACGATAACCAGTTCAGGATGTCCATCCTG
GAACGACTGGAGCAGATGGAGAGGAGGATGGCCGAGATGACGGGGTCCCAGCAGCACAAACAGGCGAGCG
GAGGCGGCAGCAGTGGAGGCGGCAGCGGGAGCGGGAATGGAGGGAGCCAGGCACAGTGTGCTTCTGGGAC
TGGGGCCTTGGGGAGCTGCTTTGAGAGCCGTGTGGTCGTGGTATGCGAGAAGATGATGAGCCGAGCCTGC
TGGGCGAAGTCCAAGCACTTGATCCACTCAAAGACTTTCCGCGGAATGACCCTACTCCACCTGGCCGCTG
CCCAGGGCTATGCCACCCTAATCCAGACCCTCATCAAATGGCGTACAAAGCACGCGGATAGCATTGACCT
GGAACTGGAAGTTGACCCCTTGAATGTGGACCACTTCTCCTGTACTCCTCTGATGTGGGCGTGTGCCCTA
GGGCACTTGGAAGCTGCCGTCGTGCTGTACAAGTGGGACCGTCGGGCCATCTCGATTCCCGACTCTCTAG
GAAGGCTGCCTTTGGGAATTGCCAGGTCACGGGGTCATGTGAAATTAGCAGAGTGTCTGGAGCACCTGCA
GAGAGATGAGCAGGCTCAGCTGGGACAGAACCCCAGAATCCACTGTCCTGCAAGCGAAGAGCCCAGCACA
GAGAGCTGGATGGCCCAGTGGCACAGCGAAGCCATCAGCTCTCCAGAAATACCCAAGGGAGTCACTGTTA
TTGCAAGCACCAACCCAGTACAGGTGACTGGAAATCCGAAGGGGACCAGTGTAGGAAAGGAGGCAGCACC
TTCACAGGTGCGTCCACGGGAACCAATGAGTGTCCTGATGATGGCTAACAGAGAGGTGGTGAATACAGAG
CTGGGGTCCTACCGTGATAGTGCAGAAAATGAAGAATGCGGCCAGCCCATGGATGACATACAGGTGAACA
TGATGACCTTGGCAGAACACATTATTGAAGCCACACCTGACCGAATCAAGCAGGAGAATTTTGTGCCCAT
GGAGTCCTCAGGATTGGAAAGAACAGACCCTGCCACCATTAGCAGTACAATGAGCTGGCTGGCCAGTTAT
CTAGCGGATGCTGACTGCCTTCCCAGTGCTGCCCAGATCCGAAGTGCATATAACGAGCCTCTAACCCCTT
CTTCTAATACCAGCTTGAGCCCTGTTGGCTCTCCCGTCAGTGAAATCGCTTTCGAGAAACCTAACCTTCC
CTCCGCCGCGGATTGGTCAGAATTCCTGAGTGCATCTACCAGTGAGAAGGTAGAGAATGAGTTTGCTCAG
CTCACTCTGTCTGATCATGAACAGAGAGAACTCTATGAGGCTGCCAGGCTTGTCCAGACAGCTTTCCGGA
AATACAAGGGCCGACCCTTGCGGGAACAGCAAGAAGTAGCTGCTGCTGTTATTCAGCGTTGTTACAGAAA
ATATAAACAGTACGCACTTTATAAAAAGATGACACAGGCTGCCATCCTTATCCAGAGCAAATTCCGAAGT
TACTATGAACAAAAAAAATTCCAGCAGAGCCGACGGGCTGCTGTGCTCATCCAAAAGTACTACCGAAGTT
ATAAGAAATGTGGCAAAAGACGGCAGGCTCGCCGGACGGCTGTGATTGTACAACAGAAACTCAGGAGCAG
TTTGCTAACCAAAAAGCAGGATCAAGCTGCTCGAAAAATAATGAGGTTTCTTCGCCGCTGTCGCCACAGA
GTGAAAGAATTGAAAAAGGCCAAGGAACTTGAAGACATACAGCAGCATCCCTTAGCAATGTGA

Translation (1560 aa):
MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSNSSHVKIFLPKKLLECLPKCSSLPKE
RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKL
KVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWT
KEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNS
AKHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSSTEVSSTNQVE
VPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATVFMSEVTNEAVYTMSPTAGPNH
HLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPTNVSEELVLSTTLDGGRKIPETTMNFDPDCFLN
NPKQGQTYGGGGLKAEMVSSNIRHSPPGERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSL
TLTAGSSLLPSGGGLSPSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQN
THSSLSDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMETSQAAEG
SEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLGNASNMELSLDHFDISFS
NQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARAPFTQAEMCLPCCSPQQGSLQLSSSEGGA
STMAYMHVAEVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQIS
VPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSIL
ERLEQMERRMAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSRAC
WAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACAL
GHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHLQRDEQAQLGQNPRIHCPASEEPST
ESWMAQWHSEAISSPEIPKGVTVIASTNPVQVTGNPKGTSVGKEAAPSQVRPREPMSVLMMANREVVNTE
LGSYRDSAENEECGQPMDDIQVNMMTLAEHIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASY
LADADCLPSAAQIRSAYNEPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQ
LTLSDHEQRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRS
YYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHR
VKELKKAKELEDIQQHPLAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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