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CAMTA1 calmodulin binding transcription activator 1 [ Homo sapiens (human) ]

Gene ID: 23261, updated on 2-Oct-2018

Summary

Official Symbol
CAMTA1provided by HGNC
Official Full Name
calmodulin binding transcription activator 1provided by HGNC
Primary source
HGNC:HGNC:18806
See related
Ensembl:ENSG00000171735 MIM:611501; Vega:OTTHUMG00000001212
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CANPMR
Summary
The protein encoded by this gene contains a CG1 DNA-binding domain, a transcription factor immunoglobulin domain, ankyrin repeats, and calmodulin-binding IQ motifs. The encoded protein is thought to be a transcription factor and may be a tumor suppressor. However, a translocation event is sometimes observed between this gene and the WWTR1 gene, with the resulting WWTR1-CAMTA1 oncoprotein leading to epithelioid hemangioendothelioma, a malignant vascular cancer. [provided by RefSeq, Mar 2017]
Expression
Ubiquitous expression in brain (RPKM 5.0), adrenal (RPKM 1.5) and 24 other tissues See more
Orthologs

Genomic context

See CAMTA1 in Genome Data Viewer
Location:
1p36.31-p36.23
Exon count:
40
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 1 NC_000001.11 (6785324..7769706)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (6845384..7829766)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1672 Neighboring gene CAMTA1 divergent transcript Neighboring gene ribosomal protein L37 pseudogene 9 Neighboring gene uncharacterized LOC105376692 Neighboring gene RNA, U1 small nuclear 8, pseudogene Neighboring gene uncharacterized LOC102725193 Neighboring gene uncharacterized LOC101928836 Neighboring gene uncharacterized LOC105376691 Neighboring gene uncharacterized LOC105376689 Neighboring gene vesicle associated membrane protein 3 Neighboring gene period circadian regulator 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Cerebellar ataxia, nonprogressive, with mental retardation
MedGen: C3553661 OMIM: 614756 GeneReviews: Not available
Compare labs

Copy number response

Description
Copy number response
Triplosensitivity

No evidence available (Last evaluated (2017-12-14)

ClinGen Genome Curation Page
Haploinsufficency

Sufficient evidence for dosage pathogenicity (Last evaluated (2017-12-14)

ClinGen Genome Curation PagePubMed

NHGRI GWAS Catalog

Description
Cross-Disorder Genome-Wide Analyses Suggest a Complex Genetic Relationship Between Tourette's Syndrome and OCD.
NHGRI GWA Catalog
Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
NHGRI GWA Catalog
Genome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortiu
NHGRI GWA Catalog
Genome-wide association study of periodontal pathogen colonization.
NHGRI GWA Catalog
Genome-wide association study of sexual maturation in males and females highlights a role for body mass and menarche loci in male puberty.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA0833

Gene Ontology Provided by GOA

Process Evidence Code Pubs
neuromuscular process controlling balance IEA
Inferred from Electronic Annotation
more info
 
positive regulation of calcineurin-NFAT signaling cascade IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of protein dephosphorylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytosol IDA
Inferred from Direct Assay
more info
 
nucleolus IDA
Inferred from Direct Assay
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
calmodulin-binding transcription activator 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_053148.1 RefSeqGene

    Range
    5001..989383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001195563.1NP_001182492.1  calmodulin-binding transcription activator 1 isoform b

    See identical proteins and their annotated locations for NP_001182492.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) uses an alternate, 3' terminal exon compared to variant 1. This results in a much shorter protein (isoform b, also known as 2) that lacks the ankyrin repeats and calmodulin-binding motifs, compared to isoform a.
    Source sequence(s)
    AB020640, BC116457, BG027385
    Consensus CDS
    CCDS55574.1
    UniProtKB/Swiss-Prot
    Q9Y6Y1
    Related
    ENSP00000451388.1, OTTHUMP00000244035, ENST00000473578.5, OTTHUMT00000003597
  2. NM_001242701.1NP_001229630.1  calmodulin-binding transcription activator 1 isoform c

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) uses an alternate, 3' terminal exon compared to variant 1. This results in a shorter protein (isoform c, also known as 3) that lacks the ankyrin repeats and calmodulin-binding motifs, compared to isoform a.
    Source sequence(s)
    AI278074, BC151835, CD103791
    Consensus CDS
    CCDS55575.1
    UniProtKB/Swiss-Prot
    Q9Y6Y1
    Related
    ENSP00000451510.1, OTTHUMP00000244036, ENST00000557126.5, OTTHUMT00000409642
  3. NM_001349608.1NP_001336537.1  calmodulin-binding transcription activator 1 isoform d

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) encodes isoform d.
    Source sequence(s)
    AL359881, AL365194, AL590128, AL596210, KF495855, Z97635, Z98052, Z98884
    Conserved Domains (4) summary
    smart01076
    Location:37153
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10351156
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:10341077
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:843922
    TIG; IPT/TIG domain
  4. NM_001349609.1NP_001336538.1  calmodulin-binding transcription activator 1 isoform e

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) encodes isoform e.
    Source sequence(s)
    AL359881, AL365194, AL590128, AL596210, KF495855, Z97635, Z98052, Z98884
    Conserved Domains (4) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
  5. NM_001349610.1NP_001336539.1  calmodulin-binding transcription activator 1 isoform f

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) encodes isoform f.
    Source sequence(s)
    AL359881, AL365194, AL590128, AL596210, KF495855, Z97635, Z98052, Z98884
    Conserved Domains (4) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
  6. NM_001349612.1NP_001336541.1  calmodulin-binding transcription activator 1 isoform g

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) encodes isoform g.
    Source sequence(s)
    AL359881, AL365194, AL590128, AL596210, KF495855, Z97635, Z98052, Z98884
    Conserved Domains (4) summary
    smart01076
    Location:37153
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10351156
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:10341077
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:843922
    TIG; IPT/TIG domain
  7. NM_001349613.1NP_001336542.1  calmodulin-binding transcription activator 1 isoform h

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9) encodes isoform h.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:108229
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:107150
    ANK; ANK repeat [structural motif]
  8. NM_001349614.1NP_001336543.1  calmodulin-binding transcription activator 1 isoform i

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10), as well as variant 11, encodes isoform i.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  9. NM_001349615.1NP_001336544.1  calmodulin-binding transcription activator 1 isoform i

    Status: REVIEWED

    Description
    Transcript Variant: This variant (11), as well as variant 10, encodes isoform i.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Related
    ENSP00000451720.1, ENST00000495233.5
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  10. NM_001349616.1NP_001336545.1  calmodulin-binding transcription activator 1 isoform j

    Status: REVIEWED

    Description
    Transcript Variant: This variant (12) encodes isoform j.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  11. NM_001349617.1NP_001336546.1  calmodulin-binding transcription activator 1 isoform k

    Status: REVIEWED

    Description
    Transcript Variant: This variant (13), as well as variant 14, encodes isoform k.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  12. NM_001349618.1NP_001336547.1  calmodulin-binding transcription activator 1 isoform k

    Status: REVIEWED

    Description
    Transcript Variant: This variant (14), as well as variant 13, encodes isoform k.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  13. NM_001349619.1NP_001336548.1  calmodulin-binding transcription activator 1 isoform l

    Status: REVIEWED

    Description
    Transcript Variant: This variant (15), as well as variant 16, encodes isoform l.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (3) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
    cl27381
    Location:435561
    Myosin_head; Myosin head (motor domain)
  14. NM_001349620.1NP_001336549.1  calmodulin-binding transcription activator 1 isoform l

    Status: REVIEWED

    Description
    Transcript Variant: This variant (16), as well as variant 15, encodes isoform l.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (3) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
    cl27381
    Location:435561
    Myosin_head; Myosin head (motor domain)
  15. NM_001349621.1NP_001336550.1  calmodulin-binding transcription activator 1 isoform m

    Status: REVIEWED

    Description
    Transcript Variant: This variant (17), as well as variant 18, encodes isoform m.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  16. NM_001349622.1NP_001336551.1  calmodulin-binding transcription activator 1 isoform m

    Status: REVIEWED

    Description
    Transcript Variant: This variant (18), as well as variant 17, encodes isoform m.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  17. NM_001349623.1NP_001336552.1  calmodulin-binding transcription activator 1 isoform n

    Status: REVIEWED

    Description
    Transcript Variant: This variant (19), as well as variant 20, encodes isoform n.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  18. NM_001349624.2NP_001336553.1  calmodulin-binding transcription activator 1 isoform n

    Status: REVIEWED

    Description
    Transcript Variant: This variant (20), as well as variant 19, encodes isoform n.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  19. NM_001349625.1NP_001336554.1  calmodulin-binding transcription activator 1 isoform o

    Status: REVIEWED

    Description
    Transcript Variant: This variant (21), as well as variant 22, encodes isoform o.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  20. NM_001349626.1NP_001336555.1  calmodulin-binding transcription activator 1 isoform o

    Status: REVIEWED

    Description
    Transcript Variant: This variant (22), as well as variant 21, encodes isoform o.
    Source sequence(s)
    AL359881, KF495855, Z98884
    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  21. NM_001349627.1NP_001336556.1  calmodulin-binding transcription activator 1 isoform p

    Status: REVIEWED

    Description
    Transcript Variant: This variant (23) encodes isoform p.
    Source sequence(s)
    AL590128
    Consensus CDS
    CCDS85922.1
    Related
    ENSP00000450530.1, ENST00000467404.6
  22. NM_015215.3NP_056030.1  calmodulin-binding transcription activator 1 isoform a

    See identical proteins and their annotated locations for NP_056030.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a, also known as 1).
    Source sequence(s)
    AL359881, BC151835, KF495855, Z98884
    Consensus CDS
    CCDS30576.1
    UniProtKB/Swiss-Prot
    Q9Y6Y1
    Related
    ENSP00000306522.6, OTTHUMP00000001352, ENST00000303635.11, OTTHUMT00000003588
    Conserved Domains (5) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
    pfam13637
    Location:11121163
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]

RNA

  1. NR_038934.1 RNA Sequence

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) lacks an alternate exon and uses an alternate, 3' terminal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AI278074, BC151835, BM470492
    Related
    ENST00000476163.5
  2. NR_146202.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL590128
  3. NR_146203.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL590128
  4. NR_146204.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL590128

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p12 Primary Assembly

    Range
    6785324..7769706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011541084.2XP_011539386.1  calmodulin-binding transcription activator 1 isoform X2

    Conserved Domains (5) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
    pfam13637
    Location:11121163
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]
  2. XM_011541083.2XP_011539385.1  calmodulin-binding transcription activator 1 isoform X1

    Conserved Domains (5) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
    pfam13637
    Location:11121163
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]
  3. XM_011541090.3XP_011539392.1  calmodulin-binding transcription activator 1 isoform X7

    Conserved Domains (5) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
    pfam13637
    Location:11121163
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]
  4. XM_017000778.1XP_016856267.1  calmodulin-binding transcription activator 1 isoform X9

  5. XM_017000777.1XP_016856266.1  calmodulin-binding transcription activator 1 isoform X8

  6. XM_011541086.3XP_011539388.1  calmodulin-binding transcription activator 1 isoform X3

    Conserved Domains (5) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10651186
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
    pfam13637
    Location:11121163
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10641107
    ANK; ANK repeat [structural motif]
  7. XM_011541087.2XP_011539389.1  calmodulin-binding transcription activator 1 isoform X5

    Conserved Domains (5) summary
    cd00204
    Location:10411162
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:849928
    TIG; IPT/TIG domain
    pfam13637
    Location:10881139
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10401083
    ANK; ANK repeat [structural motif]
    cl04295
    Location:67159
    CG-1; CG-1 domain
  8. XM_011541088.2XP_011539390.1  calmodulin-binding transcription activator 1 isoform X6

    Conserved Domains (5) summary
    smart01076
    Location:37153
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:10351156
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:843922
    TIG; IPT/TIG domain
    pfam13637
    Location:10821133
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:10341077
    ANK; ANK repeat [structural motif]
  9. XM_017000774.2XP_016856263.1  calmodulin-binding transcription activator 1 isoform X4

  10. XM_011541091.2XP_011539393.1  calmodulin-binding transcription activator 1 isoform X10

    Conserved Domains (2) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
  11. XM_011541092.3XP_011539394.1  calmodulin-binding transcription activator 1 isoform X11

    Conserved Domains (2) summary
    smart01076
    Location:67183
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    pfam01833
    Location:873952
    TIG; IPT/TIG domain
  12. XM_017000780.2XP_016856269.1  calmodulin-binding transcription activator 1 isoform X17

  13. XM_017000781.1XP_016856270.1  calmodulin-binding transcription activator 1 isoform X18

  14. XM_024454334.1XP_024310102.1  calmodulin-binding transcription activator 1 isoform X15

    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  15. XM_024454329.1XP_024310097.1  calmodulin-binding transcription activator 1 isoform X12

    Conserved Domains (2) summary
    cd00204
    Location:152273
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:151194
    ANK; ANK repeat [structural motif]
  16. XM_024454330.1XP_024310098.1  calmodulin-binding transcription activator 1 isoform X13

    Conserved Domains (2) summary
    cd00204
    Location:152273
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:151194
    ANK; ANK repeat [structural motif]
  17. XM_024454332.1XP_024310100.1  calmodulin-binding transcription activator 1 isoform X14

    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  18. XM_024454331.1XP_024310099.1  calmodulin-binding transcription activator 1 isoform X14

    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  19. XM_024454333.1XP_024310101.1  calmodulin-binding transcription activator 1 isoform X14

    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  20. XM_024454335.1XP_024310103.1  calmodulin-binding transcription activator 1 isoform X15

    Conserved Domains (2) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
  21. XM_024454338.1XP_024310106.1  calmodulin-binding transcription activator 1 isoform X16

    Conserved Domains (3) summary
    cd00204
    Location:89210
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:88131
    ANK; ANK repeat [structural motif]
    cl27381
    Location:435561
    Myosin_head; Myosin head (motor domain)

RNA

  1. XR_001737066.1 RNA Sequence

  2. XR_001737065.1 RNA Sequence

  3. XR_001737064.1 RNA Sequence

  4. XR_001737063.1 RNA Sequence

  5. XR_001737062.1 RNA Sequence

  6. XR_001737061.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001349628.1: Suppressed sequence

    Description
    NM_001349628.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
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