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Report for CCDS82293.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82293.1 Public Homo sapiens 19 YIPF2 24 110 108 CCDS HistoryNCBI Gene:78992Re-query CCDS DB by CCDS ID:82293.1Re-query CCDS DB by GeneID:78992See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82293.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000590329.5 ENSP00000467019.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590329.5Link to Ensembl Protein Viewer:ENSP00000467019.1Re-query CCDS DB by Nucleotide ID:ENST00000590329Re-query CCDS DB by Protein ID:ENSP00000467019
Original member Current member NCBI NM_001321440.2 NP_001308369.1 Accepted alive Link to Nucleotide Sequence:NM_001321440.2Link to Protein Sequence:NP_001308369.1Re-query CCDS DB by Nucleotide ID:NM_001321440Re-query CCDS DB by Protein ID:NP_001308369Link to BLAST:NP_001308369.1

Chromosomal Locations for CCDS 82293.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 10923291 10923407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10923495 10923677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10923833 10923999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10925686 10925773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10927630 10927716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10927799 10927959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10928380 10928410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGGCATCGGCCGACGAGCTGACCTTCCATGAATTCGAGGAGGCCACTAATCTTCTGGCTGACACCCCAG
ATGCAGCCACCACCAGCAGAAGCGATCAGCTGACCCCACAAGGGCACGTGGCTGTGGCCGTGGGCTCAGG
TGGCAGCTATGGAGCCGAGGATGAGGTGGAGGAGGAGAGTGACAAGGCCGCGCTCCTGCAGGAGCAGCAG
CAGCAGCAGCAGCCGGGATTCTGGACCTTCAGCTACTATCAGAGCTTCTTTGACGTGGACACCTCACAGG
TCCTGGACCGGATCAAAGGCTCACTGCTGCCCCGGCCTGGCCACAACTTTGTGCGGCACCATCTGCGGAA
TCGGCCGGATCTGTATGTGACCGTGGCAGGCATCAGCATCTACTGCTATGCGTGGCTGGTGCCCCTGGCC
CTGTGGGGCTTCCTGCGGTGGCGCAAGGGTGTCCAGGAGCGCATGGGGCCCTACACCTTCCTGGAGACTG
TGTGCATCTACGGCTACTCCCTCTTTGTCTTCATCCCCATGGTGGTCCTGTGGCTCATCCCTGTGCCTTG
GCTGCAGTGGCTCTTTGGGGCGCTGGCCCTGGGCCTGTCAGCCGCCGGGCTGGTATTCACCCTCTGGCCC
GTGGTCCGTGAGGACACCAGGCTGGTGGCCACAGTGCTGCTGTCCGTGGTCGTGCTGCTCCACGCCCTCC
TGGCCATGGGCTGTAAGTTGTACTTCTTCCAGTCGCTGCCTCCGGAGAACGTGGCTCCTCCACCCCAAAT
CACATCTCTGCCCTCAAACATCGCGCTGTCCCCTACCTTGCCGCAGTCCCTGGCCCCCTCCTAG

Translation (277 aa):
MASADELTFHEFEEATNLLADTPDAATTSRSDQLTPQGHVAVAVGSGGSYGAEDEVEEESDKAALLQEQQ
QQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYVTVAGISIYCYAWLVPLA
LWGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWP
VVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQSLPPENVAPPPQITSLPSNIALSPTLPQSLAPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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