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Report for CCDS5907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5907.1 Public Homo sapiens 7 GIMAP5 24 110 108 CCDS HistoryNCBI Gene:55340Re-query CCDS DB by CCDS ID:5907.1Re-query CCDS DB by GeneID:55340See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5907.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358647.5 ENSP00000351473.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358647.5Link to Ensembl Protein Viewer:ENSP00000351473.3Re-query CCDS DB by Nucleotide ID:ENST00000358647Re-query CCDS DB by Protein ID:ENSP00000351473
Original member Current member EBI ENST00000498181.6 ENSP00000487840.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000498181.6Link to Ensembl Protein Viewer:ENSP00000487840.2Re-query CCDS DB by Nucleotide ID:ENST00000498181Re-query CCDS DB by Protein ID:ENSP00000487840
Original member Current member NCBI NM_018384.5 NP_060854.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018384.5Link to Protein Sequence:NP_060854.2Re-query CCDS DB by Nucleotide ID:NM_018384Re-query CCDS DB by Protein ID:NP_060854Link to BLAST:NP_060854.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060854.2 307 Q96F15-1 307 100% 0 0

Chromosomal Locations for CCDS 5907.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150740885 150740927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150742183 150743063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGGAGGATTCCAGAGGGGCAAATATGGAACTATGGCTGAAGGTAGATCAGAAGATAACTTGTCTGCAA
CACCACCGGCATTGAGGATTATCCTAGTGGGCAAAACAGGCTGCGGGAAAAGTGCCACAGGGAACAGCAT
CCTTGGCCAGCCCGTGTTTGAGTCCAAGCTGAGGGCCCAGTCAGTGACCAGGACGTGCCAGGTGAAAACA
GGAACATGGAACGGGAGGAAAGTCCTGGTGGTTGACACGCCCTCCATCTTTGAGTCACAGGCCGATACCC
AAGAGCTGTACAAGAACATCGGGGACTGCTACCTGCTCTCTGCCCCGGGGCCCCACGTCCTGCTTCTGGT
GATCCAGCTGGGGCGTTTCACTGCTCAGGACACAGTGGCCATCAGGAAGGTGAAAGAGGTCTTTGGGACA
GGGGCCATGAGACATGTGGTCATCCTCTTCACCCACAAAGAGGACTTAGGGGGCCAGGCCCTGGATGACT
ATGTAGCAAACACGGACAACTGCAGCCTGAAAGACCTGGTGCGGGAGTGTGAGAGAAGGTACTGTGCCTT
CAACAACTGGGGCTCTGTGGAGGAGCAGAGGCAGCAGCAGGCAGAGCTCCTGGCTGTGATTGAGAGGCTG
GGGAGGGAGCGAGAGGGCTCCTTCCACAGCAATGACCTCTTCTTGGATGCCCAGCTGCTCCAAAGAACTG
GAGCTGGGGCCTGCCAGGAAGACTACAGGCAGTACCAGGCCAAAGTGGAATGGCAGGTGGAGAAGCACAA
GCAAGAGCTGAGGGAGAACGAGAGTAACTGGGCATACAAGGCGCTCCTCAGAGTCAAACACTTGATGCTT
TTGCATTATGAGATTTTTGTTTTTCTATTGTTGTGCAGCATACTTTTTTTCATTATTTTTCTGTTCATCT
TTCATTACATTTAA

Translation (307 aa):
MGGFQRGKYGTMAEGRSEDNLSATPPALRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQVKT
GTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQLGRFTAQDTVAIRKVKEVFGT
GAMRHVVILFTHKEDLGGQALDDYVANTDNCSLKDLVRECERRYCAFNNWGSVEEQRQQQAELLAVIERL
GREREGSFHSNDLFLDAQLLQRTGAGACQEDYRQYQAKVEWQVEKHKQELRENESNWAYKALLRVKHLML
LHYEIFVFLLLCSILFFIIFLFIFHYI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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