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Report for CCDS47519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47519.1 Public Homo sapiens 6 DACT2 24 110 108 CCDS HistoryNCBI Gene:168002Re-query CCDS DB by CCDS ID:47519.1Re-query CCDS DB by GeneID:168002See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47519.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366795.4 ENSP00000355760.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366795.4Link to Ensembl Protein Viewer:ENSP00000355760.3Re-query CCDS DB by Nucleotide ID:ENST00000366795Re-query CCDS DB by Protein ID:ENSP00000355760
Original member Current member NCBI NM_214462.5 NP_999627.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_214462.5Link to Protein Sequence:NP_999627.2Re-query CCDS DB by Nucleotide ID:NM_214462Re-query CCDS DB by Protein ID:NP_999627Link to BLAST:NP_999627.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_999627.2 774 Q5SW24-1 774 100% 0 0

Chromosomal Locations for CCDS 47519.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 168307432 168309098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168310168 168310446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168311152 168311284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168319388 168319633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2325 nt):
ATGTGGACGCCGGGCGGACCCCCGGGGTCCGCGGGCTGGGACCGCCGTAGGTTGGGCGCGAGGTTGCGCG
CGGCGTTCGCGGGGCTGCAGGAGCTGCAGGGGCTGCGAGCCACGCAGCAGGAGCGGGTACGGGGCGCCCT
GGCCCTGCAGCCCCCGCCCGCGCCCGCCGCGCCCTGCGGCCCCCACGGCCTCCACGGCCCCGAGCAGCAG
CTGGAGGCGGCGCTGGCCGCGCTGCAGGAGCAGCTGTCCCGGCTGAGACAACAGGACATCGGCCTGAAGA
CCCACCTGGACCAGCTGGACCTGCAGATTAGCAAGCTGCAGCTGGATGTGGGCACAGCCTCAGGGGAGGC
CCTGGACAGCGACAGCAGGCCCAGCTCAGGCTTTTACGAGATGAGCGACGGTGGATCCTGCTCCCTGTCC
ACGTCCTGTGCCTCCGTCTGCAGTGACCACATCTCTCCCTCGCTGGGCAGTTTGTTGCCTGTGGCCCAGG
CCCACAAGGCCAGGCCCAGCATGGGGGACTGGAGGCCCCGGTCGGTTGATGAGACTACTGTGCCAGCGTG
GAGACCCCAGGCTACCGAGGAGGGCGCCAGGCCCCCAGGGAGCGTGGAGGATGCAGGCCAGCCGTGGGGC
ACATTCTGGCCCAGGCCTGTGTCTACAGGTGATCTTGACAGAGCCCTGCCGGCGGACACGGGGCTCCAGA
AAGCCAGCGCGGACGCCGAGCTCCTCGGGCTCCTCTGCCAGGGGGTGGATATCCCGCTGCACGTGCCGGA
CCCCAAGTATCGGCAGGACCTGGTGTCCCAGGGCGGCAGGGAGGTGTACCCGTACCCCAGCCCCCTGCAC
GCCGTGGCTCTACAGAGCCCCCTGTTTGTCCTGACTAAGGAAACCCCACAGAGAGGTGGCCCCTCGTTCC
CTAGGGAGAGCCCCAGGGGCCCCGCAGGTCTGAACACCATCCAGACTGGGCCGGTCCTCGAGGCTGGCCC
GGCCAGGGCCAGAGCTTATATCGACAGGTTGCTGCATCTGTGGGGCCGGGAGACCCCAGCAAAGGGTAGC
GAGGGAGAACAGGGACCTCTAAGGCATGCAGCGTCCCCATCTCCACAGAGGCAGGGTGGCTGGAGTACAG
ACGGTGGAGGGCGACTGCTGGTCTTCGCCCCAGGGAGGGAGGACGAGGGAGGGCCAGCTCAGAGCAGGGG
TGCCGGCAGGGGCGGGCCCCAGCAGCAGGGATACATGCCCCTTGAGGGTCCCCAGCAGTCTGGCAGCCTT
CCAGAGGAGGGCTCCAAGCCCTCAAACAGCTGTGTCCTCAGGGAGACCATGGTGCAGGCTTCTCCCAGCT
CAAAGGCCCAGCAGACACCCTCAGCTCAGGACTATGGACGAGGCAACATCATATCCCCATCCAGGATGCT
GGACAAGAGCCCCTCACCGGCCTCTGGGCACTTTGCCCACCCATCCTTTGCTGCCAGCCTGAAAATGGGT
CCCCCCAAGAGCAAGGCTGAAAAAATCAAGAGAAGTCCCATGGACAAGGTGCTGAGGTTTGCAAGGCAGC
CGCTGCTTCTACTGGACAGGCCTGAGGGAGCCCATGCAGCCCCCCAGCCATCCCTGGAGTGGGACCCTGC
CCACTGGCCCACAGGGAGGGGCGGGCTCCAGCGGAGGCCAGCCCTGGCCTGGGAGGCACCCGGGCGCTCC
TGTTCTGAGTCCACCCTCTACCCCATGCCTGTCCTCGTCCCCTTGGCAGTGGCCCCGCAGGAGAGCCACC
GGACCTCAGCCCAAGCCCTGTTCCCCTTTGAGGCGTCACTGCTCACCTCAGTGGCCAGGAGGAAGCATCG
CCGCTGGCAGTCCACCGTGGAGATCTCGGCCCGGGCCCGCCTGGCCAGCTGTCCTGAGTCTAACCTGGGG
CCCCCCAGGCCCGTGGCCAGGAGAGCAGGTGGCCCACTGGCCCGGGGCCGTCCCTCACTGGTCCGCCAGG
ACGCCTACACCAGGAGCGACTCAGAGCCCTCCAAGCACTCGGCCGAGTGTGACCCGCGGTTCCCGTCAGT
CATCCCGGAGACCAGCGAGGGAGAGTCCAGTGACCACACCACCAACCGATTCGGAGACCGTGAGTCCAGC
AGCAGCGACGAGGAGGGCGGCGCCCAGAGCAGGGACTGTGACCTGGCACTGGGCTATGTGGCGGCCGGGC
ATGCGGAGCTGGCCTGGACCCAGGAGGCCCCGGTCAGCTCGGGGCCACTCCTGTCCCCCGTGCCCAAGCT
GTGCCGTATTAAGGCCTCCAAGGCCCTGAAGAAGAAGATCCGCAGGTTCCAGCCGACGGCCCTGAAGGTC
ATGACCATGGTGTGA

Translation (774 aa):
MWTPGGPPGSAGWDRRRLGARLRAAFAGLQELQGLRATQQERVRGALALQPPPAPAAPCGPHGLHGPEQQ
LEAALAALQEQLSRLRQQDIGLKTHLDQLDLQISKLQLDVGTASGEALDSDSRPSSGFYEMSDGGSCSLS
TSCASVCSDHISPSLGSLLPVAQAHKARPSMGDWRPRSVDETTVPAWRPQATEEGARPPGSVEDAGQPWG
TFWPRPVSTGDLDRALPADTGLQKASADAELLGLLCQGVDIPLHVPDPKYRQDLVSQGGREVYPYPSPLH
AVALQSPLFVLTKETPQRGGPSFPRESPRGPAGLNTIQTGPVLEAGPARARAYIDRLLHLWGRETPAKGS
EGEQGPLRHAASPSPQRQGGWSTDGGGRLLVFAPGREDEGGPAQSRGAGRGGPQQQGYMPLEGPQQSGSL
PEEGSKPSNSCVLRETMVQASPSSKAQQTPSAQDYGRGNIISPSRMLDKSPSPASGHFAHPSFAASLKMG
PPKSKAEKIKRSPMDKVLRFARQPLLLLDRPEGAHAAPQPSLEWDPAHWPTGRGGLQRRPALAWEAPGRS
CSESTLYPMPVLVPLAVAPQESHRTSAQALFPFEASLLTSVARRKHRRWQSTVEISARARLASCPESNLG
PPRPVARRAGGPLARGRPSLVRQDAYTRSDSEPSKHSAECDPRFPSVIPETSEGESSDHTTNRFGDRESS
SSDEEGGAQSRDCDLALGYVAAGHAELAWTQEAPVSSGPLLSPVPKLCRIKASKALKKKIRRFQPTALKV
MTMV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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