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Report for CCDS36968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36968.1 Public Mus musculus 14 Ppp3cc 23 108 98 CCDS HistoryNCBI Gene:19057Re-query CCDS DB by CCDS ID:36968.1Re-query CCDS DB by GeneID:19057See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36968.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078434.7 ENSMUSP00000077532.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078434.7Link to Ensembl Protein Viewer:ENSMUSP00000077532.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000078434Re-query CCDS DB by Protein ID:ENSMUSP00000077532
Original member NCBI NM_008915.3 NP_032941.1 Updated not alive Link to Nucleotide Sequence:NM_008915.3Link to Protein Sequence:NP_032941.1Re-query CCDS DB by Nucleotide ID:NM_008915Re-query CCDS DB by Protein ID:NP_032941
Current member NCBI NM_008915.4 NP_032941.1 Accepted alive Link to Nucleotide Sequence:NM_008915.4Link to Protein Sequence:NP_032941.1Re-query CCDS DB by Nucleotide ID:NM_008915Re-query CCDS DB by Protein ID:NP_032941Link to BLAST:NP_032941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032941.1 513 P48455 513 100% 0 0

Chromosomal Locations for CCDS 36968.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70218084 70218277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70220017 70220046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70224310 70224407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70224967 70225048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70235140 70235208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70236478 70236603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70240729 70240823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70240904 70240981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70245853 70245992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70247574 70247719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70256360 70256471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70266630 70266754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70267309 70267506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70289181 70289229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1542 nt):
ATGTCCGTGAGGCGCCCTCAGTTCTCCACGACCGAGCGCGTCATCAAAGCTGTCCCCTTTCCTCCAACCC
GACGGCTAACTTTGAAGGAAGTTTTTGAGAATGGGAAACCTAAAATGGATCTTTTGAAAAACCATTTAGT
AAAAGAAGGTCGGGTGGAAGAGGAGGTGGCCTTAAAGATCATCAATGATGGGGCTGCCATCCTGAAGCAG
GAGAAGACCATGATAGAGGTGGAGGCTCCGATCACAGTGTGTGGTGATGTTCATGGACAATTCTTTGACC
TGATGAAGTTGTTTGAAGTTGGGGGATCACCTAGTAATACTCGCTACCTCTTCCTGGGTGACTATGTGGA
CAGAGGCTATTTCAGTATAGAGTGTGTGCTGTATCTATGGAGCTTAAAGATTAACCATCCTAAAACATTG
TTTCTGCTTCGAGGAAATCATGAATGCAGGCATCTTACAGAGTACTTCACCTTCAAACAGGAATGTCGGA
TCAAGTATTCAGAGATGGTGTACGATGCGTGCATGCACACTTTCGACTGTCTTCCTCTTGCTGCCCTCTT
AAACCAGCAGTTTCTCTGTGTACATGGAGGAATGTCTCCTGAAATTACTTGTTTAGAGGACATTAGGAAA
TTAGATAGGTTTTCTGAGCCTCCTGCTTTTGGGCCAGTGTGTGACCTGCTGTGGTCTGATCCCTTAGAGG
ACTACGGCAGCGAGAAGACCCTGGAGCACTATACCCACAACACTGTCCGAGGCTGCTCCTACTTCTTCAG
TTACCCTGCAGTTTGTGAATTTTTACAGAACAACAGTTTATTATCAATAATCAGAGCCCATGAAGCCCAG
GATGCGGGGTACCGAATGTATAGGAAGAACCAAGCAACTGGCTTTCCGTCACTTATTACGATTTTCTCTG
CCCCTAATTACCTAGATGTCTATAACAATAAAGCTGCAGTGTTGAAGTATGAAAACAATGTCATGAACAT
CAGGCAGTTCAACTGTTCCCCACACCCCTACTGGCTCCCAAACTTCATGGATGTTTTCACGTGGTCTTTG
CCTTTTGTTGGAGAGAAAGTGACAGAGATGCTGGTCAATATTCTCAACATATGCTCGGATGAAGAAATGA
ACGTAACCGATGAAGAAGGAGCTACTACAGGTCGAAAAGAAGTCATCAAGAATAAAATCCGAGCCATTGG
GAAAATGGCCCGGGTCTTTACGGTTCTTCGGGAAGAGAGTGAGAATGTGCTGACCCTCAAGGGCCTCACT
CCCACAGGCACACTCCCACTGGGGGTCCTCTCTGGAGGAAAGCAGACCATTGAGACTGCCAAACAAGAAG
CCGCAGAGGAGCGGGAAGCCATCAGAGGTTTTACAATTGCACACAGGATCCGAAGTTTTGAAGAAGCCCG
AGGTCTAGACCGAATTAATGAGAGAATGCCACCCCGAAAAGAGGCTTCATATCATCATGATGCAGGGAGG
ATGCACTCACACTCGCATCCGCCACACCCACAGGCGTCAAGAAGGACCGACCATGGAAAGAAAGCCCTGT
AA

Translation (513 aa):
MSVRRPQFSTTERVIKAVPFPPTRRLTLKEVFENGKPKMDLLKNHLVKEGRVEEEVALKIINDGAAILKQ
EKTMIEVEAPITVCGDVHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECVLYLWSLKINHPKTL
FLLRGNHECRHLTEYFTFKQECRIKYSEMVYDACMHTFDCLPLAALLNQQFLCVHGGMSPEITCLEDIRK
LDRFSEPPAFGPVCDLLWSDPLEDYGSEKTLEHYTHNTVRGCSYFFSYPAVCEFLQNNSLLSIIRAHEAQ
DAGYRMYRKNQATGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSL
PFVGEKVTEMLVNILNICSDEEMNVTDEEGATTGRKEVIKNKIRAIGKMARVFTVLREESENVLTLKGLT
PTGTLPLGVLSGGKQTIETAKQEAAEEREAIRGFTIAHRIRSFEEARGLDRINERMPPRKEASYHHDAGR
MHSHSHPPHPQASRRTDHGKKAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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