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Report for CCDS36637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36637.1 Public Mus musculus 13 Gcnt2 23 108 98 CCDS HistoryNCBI Gene:14538Re-query CCDS DB by CCDS ID:36637.1Re-query CCDS DB by GeneID:14538See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36637.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110191.9 ENSMUSP00000105820.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110191.9Link to Ensembl Protein Viewer:ENSMUSP00000105820.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110191Re-query CCDS DB by Protein ID:ENSMUSP00000105820
Original member NCBI NM_023887.4 NP_076376.3 Updated not alive Link to Nucleotide Sequence:NM_023887.4Link to Protein Sequence:NP_076376.3Re-query CCDS DB by Nucleotide ID:NM_023887Re-query CCDS DB by Protein ID:NP_076376
Current member NCBI NM_023887.5 NP_076376.3 Accepted alive Link to Nucleotide Sequence:NM_023887.5Link to Protein Sequence:NP_076376.3Re-query CCDS DB by Nucleotide ID:NM_023887Re-query CCDS DB by Protein ID:NP_076376Link to BLAST:NP_076376.3

Chromosomal Locations for CCDS 36637.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 40860355 40861273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40953576 40953671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40958152 40958342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGGGCTCTTGGAAGTACAGTCTTTTCAGCCTATCTCTCATTGCTGCCTTGATGCTTATGTTTATGTACG
ATAGAAAATTATGGAAGAACTATCATTTCCCGAGGGCGGTTTCCAATATTTCAGTCTTAGCGGAAGTCTG
CTTGCAGATGTTCAGTGGGGAGAGTTTTTATACAGCGGACAGCGCACGGAAAACCACCCTGGAAAACTTC
ACCTGCCCCGAGTACAAGATTCAAAACCACTACATAACAGAGACTCTCTCTGAAGAAGAAGCCCGCTTCC
CTCTGGCTTTCACACTTACTATCCACAAAGATTATGACACTTTCGAGAGACTCTTCAGGGCCATTTACAT
GCCCCAGAACGTCTACTGTGTGCACGTGGATAGTAAGGCGACAGACACCTTCAAAGAAGAGGTGCGGCAG
TTACTAAGCTGTTTCCCCAATGCCTTCCTGGCCTCTAGGATGGAGCCGGTGGTCTATGGTGGCTTCTCCC
GGCTCCAAGCTGATCTGAACTGCATGAAAGATCTGGTGGCCTCCAAGATCCCCTGGAAATATGTCCTCAA
CACCTGCGGGCAGGACTTTCCTCTGAAAACCAACAAAGAAATAGTTCAGTACCTGAAACGGTTTATTGGG
AAGAACCTCACCCCAGGGGTGCTGCCTCCTGCACATGCAGTTGGAAGAACCAAGTACGTCCACCAGGAGC
TGTTAGACCATAAAAATCCCTACGTGCACAATACAGCAAGATTAAAAGCTCCCCCACCTCACAACCTGAC
CATTTACTTTGGCACTGCTTATGTGGCTCTCACACGGGAATTTGCTAACTTTGTCCTCAAAGACCAGCGT
TCAGTAGACTTAATCTCCTGGTCCAAGGACACGTATAGTCCTGATGAGCACTTCTGGGTGACACTCAATA
GGATCCCTGGAGTCCCTGGCTCCATGCCACCAAACGCATCCTGGACGGGTAACCTCAGAGCTGTGAAGTG
GATGGACATGGAAGCGAAGCATGGAGGCTGCCATGGTCACTACGTCCATGGCATTTGTATCTATGGAAAC
GGAGACTTGCAGTGGCTGATTAATTCGCAAAGCCTGTTTGCTAACAAATTTGAACTCAACACATACCCTC
TTACCGTGGAATGCCTGGAACTGAGGCTTCGAGAAAGAACACTCAACCAGAGTGAGATCGCCATACAGCC
GAGCTGGTATTTCTGA

Translation (401 aa):
MGSWKYSLFSLSLIAALMLMFMYDRKLWKNYHFPRAVSNISVLAEVCLQMFSGESFYTADSARKTTLENF
TCPEYKIQNHYITETLSEEEARFPLAFTLTIHKDYDTFERLFRAIYMPQNVYCVHVDSKATDTFKEEVRQ
LLSCFPNAFLASRMEPVVYGGFSRLQADLNCMKDLVASKIPWKYVLNTCGQDFPLKTNKEIVQYLKRFIG
KNLTPGVLPPAHAVGRTKYVHQELLDHKNPYVHNTARLKAPPPHNLTIYFGTAYVALTREFANFVLKDQR
SVDLISWSKDTYSPDEHFWVTLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGN
GDLQWLINSQSLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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