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Report for CCDS82169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82169.1 Public Homo sapiens 17 VEZF1 24 110 108 CCDS HistoryNCBI Gene:7716Re-query CCDS DB by CCDS ID:82169.1Re-query CCDS DB by GeneID:7716See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82169.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000584396.5 ENSP00000464687.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000584396.5Link to Ensembl Protein Viewer:ENSP00000464687.1Re-query CCDS DB by Nucleotide ID:ENST00000584396Re-query CCDS DB by Protein ID:ENSP00000464687
Original member Current member NCBI NM_001330393.2 NP_001317322.1 Accepted alive Link to Nucleotide Sequence:NM_001330393.2Link to Protein Sequence:NP_001317322.1Re-query CCDS DB by Nucleotide ID:NM_001330393Re-query CCDS DB by Protein ID:NP_001317322Link to BLAST:NP_001317322.1

Chromosomal Locations for CCDS 82169.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 57974473 57974900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57979152 57979313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57980603 57980786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57981873 57981936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57982699 57983393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57985254 57985259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1539 nt):
ATGGCAGCCCATGAAGCTTCCCATCACCAACAGCAGGCAGCACAGAACAGCTTGCTGCCCCTCCTGAGCT
CTGCCGTGGAGCCCCCTGATCAGAAACCATTGCTTCCAATACCAATAACTCAGAAACCTCAGGGTGCACC
AGAAACATTAAAGGATGCCATTGGGATTAAAAAAGAAAAACCCAAAACTTCATTTGTGTGCACTTACTGC
AGTAAAGCTTTCAGGGACAGCTATCACCTGAGGCGCCACGAATCCTGCCACACAGGGATCAAGTTGGTGT
CCCGGCCAAAGAAAACCCCCACCACGGTGGTTCCCCTTATCTCTACCATCGCTGGGGACAGCAGCCGAAC
TTCGTTGGTCTCGACCATTGCAGGCATCTTGTCAACAGTCACTACATCTTCCTCGGGCACCAACCCCAGT
AGCAGTGCCAGCACCACAGCTATGCCAGTGACCCAGTCTGTCAAGAAACCCAGTAAGCCTGTCAAGAAGA
ACCATGCTTGTGAGATGTGTGGGAAGGCCTTCCGAGATGTGTACCATCTCAATCGACACAAGCTCTCCCA
TTCAGATGAGAAACCCTTTGAGTGTCCTATTTGTAATCAGCGCTTCAAGAGGAAGGACCGGATGACTTAC
CATGTGAGGTCTCATGAAGGAGGCATCACCAAACCCTATACTTGCAGTGTTTGTGGGAAAGGCTTCTCAA
GGCCTGACCACTTAAGCTGTCATGTAAAACATGTCCATTCAACAGAAAGACCCTTCAAATGCCAAACGTG
CACTGCTGCCTTTGCCACCAAAGACAGACTGCGGACACACATGGTGCGCCATGAAGGCAAGGTATCATGT
AACATCTGTGGGAAGCTCCTGAGTGCAGCATACATCACCAGCCACTTAAAGACTCATGGGCAGAGCCAAA
GTATCAACTGTAATACATGTAAACAAGGCATCAGTAAAACATGCATGAGTGAAGAGACCAGTAACCAAAA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACATGTGACAAGCTGG
CCAGGGAAGCAAGTAGAAACACTGAGACTGTGGGAAGAAGCTGTTAAAGCAAGGAAGAAAGAAGCTGCTA
ACCTGTGCCAAACCTCCACGGCTGCTACGACACCTGTGACTCTCACTACTCCATTCAGTATAACATCCTC
TGTGTCGTCTGGGACTATGTCAAACCCAGTCACAGTGGCAGCTGCAATGAGCATGAGAAGTCCAGTAAAT
GTTTCAAGTGCAGTTAACATAACCAGCCCAATGAACATAGGGCATCCTGTAACTATAACCAGTCCATTAT
CCATGACCTCTCCTTTAACACTCACTACCCCAGTCAACCTCCCCACCCCCGTCACTGCCCCAGTGAATAT
AGCACACCCTGTCACCATCACATCTCCAATGAATCTACCCACACCTATGACATTAGCCGCCCCTCTCAAT
ATAGCAATGAGACCTGTAGAGAGCATGCCTTTCTTGCCCCAAGCTTTGCCTACATCACCGCCTTGGTAA

Translation (512 aa):
MAAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYC
SKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPS
SSASTTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTY
HVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSC
NICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQHVTSW
PGKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNPVTVAAAMSMRSPVN
VSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTPVNLPTPVTAPVNIAHPVTITSPMNLPTPMTLAAPLN
IAMRPVESMPFLPQALPTSPPW


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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