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Report for CCDS66737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66737.1 Public Homo sapiens 15 RPUSD2 24 110 108 CCDS HistoryNCBI Gene:27079Re-query CCDS DB by CCDS ID:66737.1Re-query CCDS DB by GeneID:27079See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66737.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000559271.1 ENSP00000453036.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559271.1Link to Ensembl Protein Viewer:ENSP00000453036.1Re-query CCDS DB by Nucleotide ID:ENST00000559271Re-query CCDS DB by Protein ID:ENSP00000453036
Original member Current member NCBI NM_001286407.2 NP_001273336.1 Accepted alive Link to Nucleotide Sequence:NM_001286407.2Link to Protein Sequence:NP_001273336.1Re-query CCDS DB by Nucleotide ID:NM_001286407Re-query CCDS DB by Protein ID:NP_001273336Link to BLAST:NP_001273336.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273336.1 484 Q8IZ73-2 484 100% 0 0

Chromosomal Locations for CCDS 66737.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 40569338 40569760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40571604 40571900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40573527 40574261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGTGGCTGGACCGCCGCGGATGGCTCAGGGTTCTTGGACATTGGCGCTACGACCTTAGGCGCCCTAGCT
TTACCAGGACTTGGAGTGGCGATAAGGGCCCAATGGCAGAAACAGTGTCTACCCAGGTTGGGACAGAGGG
CGGGCTGAGGGCTTCGCATCAGCAAAACGGTGACGCTGGTGGCGACGCGAAGGTTGAGCTGTCCCCCGGG
CCCCCGAAGCCGGCTGGCCGGGAAGTGGAGCCGGCCCCAGTAGGCGGGGAGCATCCCTCGGCTGCAGCCC
CAGGCCCGGGCAAGCATAAGAAGCGGCGGGGCGCAACCAGGGAGCGTGTCGTGCCGCCCCCGAAGAAGCG
GCGGACCGGGGTGAGCTTCGGAGATGAGCACTTTGCAGAAACCAGTTATTACTTCGAGGGCGGCCTGCGT
AAGGACAATGATTTCTTGCGGAACACAGTGCACAGGCATGAGCCACCAGTCACAGCAGAGCCCATTCGCC
TGCTAGCTGAGAACGAAGATGTGGTGGTTGTAGACAAGCCTTCCTCCATTCCCGTTCACCCCTGTGGCCG
CTTCCGACACAACACAGTTATCTTCATCCTAGGCAAGGAGCACCAACTCAAGGAGCTACACCCCTTGCAT
CGGCTTGACCGCCTTACCTCAGGGGTGCTTATGTTTGCCAAGACAGCTGCAGTCTCTGAGAGAATTCACG
AGCAGGTTCGGGACCGGCAGCTGGAGAAGGAGTACGTGTGCCGGGTGGAAGGGGAGTTCCCCACTGAGGA
AGTGACCTGTAAAGAACCCATCTTAGTGGTGTCTTACAAAGTAGGGGTGTGCCGTGTAGATCCCCGGGGC
AAGCCCTGTGAGACAGTGTTCCAGAGGCTAAGCTACAATGGCCAGTCCAGTGTGGTACGGTGCCGGCCAC
TCACAGGCCGCACACACCAGATTCGAGTCCACCTTCAGTTCTTGGGCCATCCCATTCTCAACGACCCCAT
CTACAACTCAGTTGCCTGGGGTCCTTCTCGAGGCCGGGGCGGCTACATTCCCAAGACAAACGAGGAGTTG
CTACGGGACCTGGTAGCAGAGCACCAGGCCAAACAGAGCCTGGATGTGCTAGATCTCTGTGAGGGTGACC
TGTCCCCAGGACTCACAGACTCTACGGCCCCCTCCTCAGAGTTGGGCAAGGACGACCTGGAAGAGTTGGC
TGCAGCTGCCCAGAAGATGGAGGAAGTAGCTGAGGCAGCCCCTCAGGAGTTGGACACAATAGCCTTGGCA
TCAGAGAAGGCAGTTGAAACAGATGTCATGAATCAAGAGACAGACCCACTCTGTGCAGAGTGCCGGCTGG
TGCGACAGGATCCCTTGCCCCAAGACCTTGTGATGTTCCTACATGCCCTACGCTATAAAGGGCCAGGCTT
TGAGTACTTTTCACCAATGCCTGCCTGGGCACAGGATGACTGGCAAAAGGACTGA

Translation (484 aa):
MWLDRRGWLRVLGHWRYDLRRPSFTRTWSGDKGPMAETVSTQVGTEGGLRASHQQNGDAGGDAKVELSPG
PPKPAGREVEPAPVGGEHPSAAAPGPGKHKKRRGATRERVVPPPKKRRTGVSFGDEHFAETSYYFEGGLR
KDNDFLRNTVHRHEPPVTAEPIRLLAENEDVVVVDKPSSIPVHPCGRFRHNTVIFILGKEHQLKELHPLH
RLDRLTSGVLMFAKTAAVSERIHEQVRDRQLEKEYVCRVEGEFPTEEVTCKEPILVVSYKVGVCRVDPRG
KPCETVFQRLSYNGQSSVVRCRPLTGRTHQIRVHLQFLGHPILNDPIYNSVAWGPSRGRGGYIPKTNEEL
LRDLVAEHQAKQSLDVLDLCEGDLSPGLTDSTAPSSELGKDDLEELAAAAQKMEEVAEAAPQELDTIALA
SEKAVETDVMNQETDPLCAECRLVRQDPLPQDLVMFLHALRYKGPGFEYFSPMPAWAQDDWQKD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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