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Report for CCDS63832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63832.1 Public Homo sapiens 3 LRRC31 24 110 108 CCDS HistoryNCBI Gene:79782Re-query CCDS DB by CCDS ID:63832.1Re-query CCDS DB by GeneID:79782See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63832.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264676.9 ENSP00000264676.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000264676.9Link to Ensembl Protein Viewer:ENSP00000264676.5Re-query CCDS DB by Nucleotide ID:ENST00000264676Re-query CCDS DB by Protein ID:ENSP00000264676
Original member Current member NCBI NM_001277128.2 NP_001264057.1 Accepted alive Link to Nucleotide Sequence:NM_001277128.2Link to Protein Sequence:NP_001264057.1Re-query CCDS DB by Nucleotide ID:NM_001277128Re-query CCDS DB by Protein ID:NP_001264057Link to BLAST:NP_001264057.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264057.1 496 Q6UY01-2 496 100% 0 0

Chromosomal Locations for CCDS 63832.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 169839982 169840313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169848120 169848287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169851619 169851786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169854813 169854980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169856336 169856503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169856705 169856872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169861670 169861813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169869633 169869807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGAGTCAAACAAGGAAGAAAACTTCCTCAGAAGGAGAAACTAAGCCCCAGACTTCAACTGTCAACAAAT
TTCTCAGGGGCTCCAATGCTGAAAGCAGAAAAGAGGACAATGACCTTAAAACAAGTGATTCCCAACCCAG
CGACTGGATACAGAAGACAGCCACCTCAGAGACTGCTAAGCCTCTCAGTTCAGAAATGGAATGGAGATCC
AGTATGGAGAAAAATGAGCATTTCCTGCAGAAGCTGGGCAAAAAGGCTGTCAACAAGTGTCTAGATTTGA
ATAACTGTGGATTAACAACAGCGGACATGAAAGAAATGGGAGAAGCATTTGAGATGATTCCTGAACTTGA
AGAGCTAAATTTGTCTTGGAACAGTAAAGTGGGAGGAAATTTGCCTCTGATCCTTCAGAAGTTCCAAAAA
GGGAGCAAGATACAAATGATTGAGCTTGTGGATTGCTCCCTCACGTCAGAAGATGGGACATTTCTGGGTC
AACTGCTACCTATGCTGCAAAGTCTCGAAGTACTTGATCTTTCCATTAACAGAGACATTGTTGGCAGTCT
GAACAGTATTGCTCAGGGATTAAAAAGCACCTCAAATCTGAAAGTACTGAAGTTACATTCATGTGGATTA
TCACAAAAGAGTGTCAAAATATTGGATGCTGCTTTTAGGTATTTGGGTGAGCTGAGGAAATTAGATCTTT
CCTGCAATAAGGATCTAGGTGGAGGTTTTGAAGACTCGCCGGCTCAGTTGGTCATGCTAAAGCATCTACA
AGTCCTAGATCTTCACCAGTGCTCACTAACAGCAGATGACGTGATGTCACTGACCCAGGTCATTCCTTTA
CTTTCAAATCTTCAAGAATTGGATTTATCAGCCAACAAAAAGATGGGCAGTTCTTCTGAAAACTTACTCA
GCAGGCTCCGATTTTTACCAGCATTGAAGTCATTAGTTATCAACAACTGTGCTTTGGAGAGTGAGACTTT
TACAGCTCTTGCTGAAGCCTCTGTTCACCTCTCTGCTCTGGAAGTATTCAACCTTTCTTGGAACAAGTGT
GTTGGTGGCAACTTGAAGCTGCTTCTGGAAACACTAAAGCTTTCCATGTCTCTTCAAGTGCTGAGGCTGA
GCAGCTGTTCCCTGGTGACAGAGGATGTGGCTCTCCTGGCATCGGTCATACAGACGGGTCATCTGGCCAA
ACTGCAAAAGCTGGACCTGAGCTACAATGACAGCATCTGTGATGCGGGGTGGACCATGTTCTGCCAAAAC
GTGCGGTTCCTCAAAGAGCTAATCGAGCTGGATATTAGCCTTCGACCATCAAATTTTCGAGATTGTGGAC
AATGGTTTAGACACTTGTTATATGCTGTGACCAAGCTTCCTCAGATCACTGAGATAGGAATGAAAAGATG
GATTCTCCCAGCTTCACAGGAGGAAGAACTAGAATGCTTTGACCAAGATAAAAAAAGAAGCATTCACTTT
GACCATGGTGGGTTTCAGTAA

Translation (496 aa):
MSQTRKKTSSEGETKPQTSTVNKFLRGSNAESRKEDNDLKTSDSQPSDWIQKTATSETAKPLSSEMEWRS
SMEKNEHFLQKLGKKAVNKCLDLNNCGLTTADMKEMGEAFEMIPELEELNLSWNSKVGGNLPLILQKFQK
GSKIQMIELVDCSLTSEDGTFLGQLLPMLQSLEVLDLSINRDIVGSLNSIAQGLKSTSNLKVLKLHSCGL
SQKSVKILDAAFRYLGELRKLDLSCNKDLGGGFEDSPAQLVMLKHLQVLDLHQCSLTADDVMSLTQVIPL
LSNLQELDLSANKKMGSSSENLLSRLRFLPALKSLVINNCALESETFTALAEASVHLSALEVFNLSWNKC
VGGNLKLLLETLKLSMSLQVLRLSSCSLVTEDVALLASVIQTGHLAKLQKLDLSYNDSICDAGWTMFCQN
VRFLKELIELDISLRPSNFRDCGQWFRHLLYAVTKLPQITEIGMKRWILPASQEEELECFDQDKKRSIHF
DHGGFQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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