NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5478.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5478.1 Public Homo sapiens 7 MYL7 24 110 108 CCDS HistoryNCBI Gene:58498Re-query CCDS DB by CCDS ID:5478.1Re-query CCDS DB by GeneID:58498See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5478.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223364.7 ENSP00000223364.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000223364.7Link to Ensembl Protein Viewer:ENSP00000223364.3Re-query CCDS DB by Nucleotide ID:ENST00000223364Re-query CCDS DB by Protein ID:ENSP00000223364
Original member Current member NCBI NM_021223.3 NP_067046.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021223.3Link to Protein Sequence:NP_067046.1Re-query CCDS DB by Nucleotide ID:NM_021223Re-query CCDS DB by Protein ID:NP_067046Link to BLAST:NP_067046.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067046.1 175 Q01449 175 100% 0 0

Chromosomal Locations for CCDS 5478.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44138921 44139022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44139521 44139569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44139782 44139860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44140323 44140427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44140712 44140787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44140961 44141074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44141303 44141305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGGCCAGCAGGAAGGCGGGGACCCGGGGCAAGGTGGCAGCCACCAAGCAGGCCCAACGTGGTTCTTCCA
ACGTCTTTTCCATGTTTGAACAAGCCCAGATACAGGAGTTCAAAGAAGCCTTCAGCTGTATCGACCAGAA
TCGTGATGGCATCATCTGCAAGGCAGACCTGAGGGAGACCTACTCCCAGCTGGGGAAGGTGAGTGTCCCA
GAGGAGGAGCTGGACGCCATGCTGCAAGAGGGCAAGGGCCCCATCAACTTCACCGTCTTCCTCACGCTCT
TTGGGGAGAAGCTCAATGGGACAGACCCCGAGGAAGCCATCCTGAGTGCCTTCCGCATGTTTGACCCCAG
CGGCAAAGGGGTGGTGAACAAGGATGAGTTCAAGCAGCTTCTCCTGACCCAGGCAGACAAGTTCTCTCCA
GCTGAGGTGGAGCAGATGTTCGCCCTGACACCCATGGACCTGGCGGGGAACATCGACTACAAGTCACTGT
GCTACATCATCACCCATGGAGACGAGAAAGAGGAATGA

Translation (175 aa):
MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVP
EEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQLLLTQADKFSP
AEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH