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Report for CCDS40714.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40714.1 Public Mus musculus 9 Prss35 23 108 98 CCDS HistoryNCBI Gene:244954Re-query CCDS DB by CCDS ID:40714.1Re-query CCDS DB by GeneID:244954See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40714.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036426.12 ENSMUSP00000035271.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036426.12Link to Ensembl Protein Viewer:ENSMUSP00000035271.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000036426Re-query CCDS DB by Protein ID:ENSMUSP00000035271
Original member Current member EBI ENSMUST00000179574.1 ENSMUSP00000137445.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179574.1Link to Ensembl Protein Viewer:ENSMUSP00000137445.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179574Re-query CCDS DB by Protein ID:ENSMUSP00000137445
Original member Current member NCBI NM_178738.3 NP_848853.2 Accepted alive Link to Nucleotide Sequence:NM_178738.3Link to Protein Sequence:NP_848853.2Re-query CCDS DB by Nucleotide ID:NM_178738Re-query CCDS DB by Protein ID:NP_848853Link to BLAST:NP_848853.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848853.2 409 Q8C0F9 409 100% 0 0

Chromosomal Locations for CCDS 40714.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 86755179 86756408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1230 nt):
ATGGAAAATACGTTACTCTGGTTGGTAATTTTAATCCCTGGATGGGCCCTCTCTGATGGGTCGGAAACAG
AACTAGACTTCACGTGGCACTTGAGCAGAATACCCCAGGTTGTGAGTGAGAACACTATCCATCTTGCCAG
CCCCACGTTCCAGGCGGATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCGAATGTCAGGAAGAGCTC
CCGGCTCCCAGCCTTTCCCAGTTGGAAGAGTCCCTATCCTATGAGACCATCTTCGAGAATGGCACCCGAA
CCTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGAACCCACTCGGAACAGCAGCGTAAAAGGAGCACA
CCCTAGGAGAAGGAGGCAGGTGTATGGTACGGACAGCAGGTTCAGCATCTTAGACAAAAGGTTCGCGACC
AATTTCCCTTTTAATACAGCAGTGAAGCTATCCACCGGCTGCAGCGGTACCCTCGTTTCCCCCAACCATG
TGCTCACAGCTGCCCACTGTGTCCACGATGGGAAGGACTATGTCAAAGGCAGTAAAAAGCTGAGGGTGGG
AGTGCTGAAGATGAGAAACAAAGGAGGTCGCAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGAAGCA
GAGAGTGCTGGTCAAAGTCAGGCGCATCTTCGGGAGAGCACCACCCAAAGACCGGGGAAAAAATCCAGGC
GTGGTCCAAGAGTCACCCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAA
AGGCTGGGTGAGGGGAGAGAATGGGGGCCTGGCCTTGGACTACGACTACGCGCTCCTGGAGCTGAAGCGC
GCACACAAGCAACAGCACATGGAGCTGGGAGTCAGCCCCACCATCACCAAGCTGCCGGGAGGCCGGATCC
ACTTCTCTGGATTTGACAACGACAGGGATGAACAGTTGGTGTATCGGTTTTGCAGCGTTTCTGAGGAATC
CAATGACCTCCTGTATCAGTATTGCGATGCTGAGGCAGGCTCCACAGGCTCGGGGATCTACCTGAGGCTC
AAAGAACCAGGCCAAAAAAATTGGAAGCGCAAGATCGTCGCGGTCTACTCGGGCCACCAGTGGGTGGATG
TGCACGGAGTTCAGAAGGACTATAACGTGGCTGTGCGCATCACTCCGCTCAAGTACGCCCAGATTTGCCT
CTGGATCCACGGAAACGCTGCCAACTGTGCTTACGGCTGA

Translation (409 aa):
MENTLLWLVILIPGWALSDGSETELDFTWHLSRIPQVVSENTIHLASPTFQADAGVVKATVCGIECQEEL
PAPSLSQLEESLSYETIFENGTRTLTRVKVQGLVLEPTRNSSVKGAHPRRRRQVYGTDSRFSILDKRFAT
NFPFNTAVKLSTGCSGTLVSPNHVLTAAHCVHDGKDYVKGSKKLRVGVLKMRNKGGRKKRRGSKRSRREA
ESAGQSQAHLRESTTQRPGKKSRRGPRVTQGRPSFQWTRVKSTHIPKGWVRGENGGLALDYDYALLELKR
AHKQQHMELGVSPTITKLPGGRIHFSGFDNDRDEQLVYRFCSVSEESNDLLYQYCDAEAGSTGSGIYLRL
KEPGQKNWKRKIVAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNAANCAYG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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