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Report for CCDS32119.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32119.2 Public Homo sapiens 14 BBOF1 24 110 108 CCDS HistoryNCBI Gene:80127Re-query CCDS DB by CCDS ID:32119.2Re-query CCDS DB by GeneID:80127See the combined annotation on chromosome 14 in Sequence Viewer

Public Note for CCDS 32119.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32119.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394009.5 ENSP00000377577.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394009.5Link to Ensembl Protein Viewer:ENSP00000377577.3Re-query CCDS DB by Nucleotide ID:ENST00000394009Re-query CCDS DB by Protein ID:ENSP00000377577
Original member Current member NCBI NM_025057.3 NP_079333.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025057.3Link to Protein Sequence:NP_079333.2Re-query CCDS DB by Nucleotide ID:NM_025057Re-query CCDS DB by Protein ID:NP_079333Link to BLAST:NP_079333.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079333.2 529 Q8ND07 529 100% 0 0

Chromosomal Locations for CCDS 32119.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 74019479 74019534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74022916 74023144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74029184 74029249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74034028 74034171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74040565 74040645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74046060 74046130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74047930 74048074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74049702 74050195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74055584 74055685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74056906 74056980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74057144 74057258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74064688 74064699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGCCGTCGAAGGGAAAGGACAAAAAGAAAGGCAAGAGCAAAGGCAAAGACACGAAGAAGTTAATAAAAA
CAGATGAATCTGTGGTGGACAGAGCCAAGGCCAATGCCTCCCTTTGGGAGGCCAGGTTGGAAGTCACAGA
ACTCTCTAGGATTAAGTATCGTGATACTTCACGGATACTGGCAAAAAGTAATGAGGACTTAAAGAAAAAG
CAATGTAAAATGGAGAAAGACATAATGTCAGTATTAAGTTACCTGAAGAAGCAGGATCAGGAGAAAGATA
ATATGATTGAAAAACTGAAACAGCAATTAAATGAAACAAAGGAAAAAGCCCAAGAGGAGAAGGATAAATT
GGAACAAAAGTATACCAGGCAAATTAATGAACTAGAGGGACAGTTCCATCAAAAAGCCAAAGAAATTGGC
ATGATTCACACAGAGCTGAAAGCAGTAAGACAATTCCAGAAGAGAAAAATCCAAGTGGAGAGAGAGTTAG
ATGATCTGAAAGAGAATTTAAGAAACACAGAGCGGATACATCAGGAGACTCTTAGAAGACTGGAAAGCAG
ATTTTTTGAAGAAAAGCACCGACTAGAACAAGAGGCTGAAAAGAAGATAATAATGCTAGCAGAGAGAGCC
CACCATGAGGCTATTGTGCAATTGAACGATGCTGGAAGAAATGTTTTTAAAGAGAATGATTATCTTCAGA
AAGCTCTGGCATATCACCTGAAGGAAACTGACGCTCTACAAAAAAACTCCCAGAAGTTGCAAGAGAGTCA
TACTTTACTTTTACATCAAAAGGAGATCAATGATCTGTTGGTTAAGGAAAAGATTATGCAACTTGTCCAG
CAGAGATCACAAATCCAAACCCTTCAGAAGAAGGTAGTAAACTTGGAGACTGCTCTGAGTTACATGACCA
AAGAGTTTGAGAGTGAAGTTTTAAAACTGCAGCAACACGCAATGATAGAGAACCAAGCAGGTCAGGTAGA
AATTGACAAGCTGCAGCACCTTCTTCAGATGAAGGACAGGGAAATGAATCGTGTGAAGAAGCTGGCCAAG
AACATACTGGATGAGAGAACAGAAGTGGAAAGATTCTTTTTAGATGCTCTGCACCAAGTGAAGCAACAGA
TCCTAATTAGCAGGAAGCATTATAAGCAGATAGCACAAGCTGCTTTCAATTTAAAAATGAGAGCAGCATG
TACAGGAAGAACAGAATATCCCAAAATCAGAACATTTGATGGCAGAGAGCACAGCACCAATAGTGTGAAT
CAGGATCTTCTGGAGGCCGAAAAATGGACACATATTGAAGGAAATGTGGATATTGGAGATTTGACCTGGG
AGCAGAAGGAAAAAGTATTGCGATTGCTCTTTGCAAAAATGAATGGCTGTCCTTCTAGGAAATACAACCA
GAGTTCTAGGCCTCCAGTTCCAGACTATGTTGTTTCTGACAGTGGGGAAACAAAGGAATTTGGGGATGAA
AGTAAGCTTCAAGATAAAATCTTCATCACCCAGCAAATTGCAATATCAGACTCTTCTGGTGAAGTGGTGC
TACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGGAACCTTCTGA

Translation (529 aa):
MPSKGKDKKKGKSKGKDTKKLIKTDESVVDRAKANASLWEARLEVTELSRIKYRDTSRILAKSNEDLKKK
QCKMEKDIMSVLSYLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIG
MIHTELKAVRQFQKRKIQVERELDDLKENLRNTERIHQETLRRLESRFFEEKHRLEQEAEKKIIMLAERA
HHEAIVQLNDAGRNVFKENDYLQKALAYHLKETDALQKNSQKLQESHTLLLHQKEINDLLVKEKIMQLVQ
QRSQIQTLQKKVVNLETALSYMTKEFESEVLKLQQHAMIENQAGQVEIDKLQHLLQMKDREMNRVKKLAK
NILDERTEVERFFLDALHQVKQQILISRKHYKQIAQAAFNLKMRAACTGRTEYPKIRTFDGREHSTNSVN
QDLLEAEKWTHIEGNVDIGDLTWEQKEKVLRLLFAKMNGCPSRKYNQSSRPPVPDYVVSDSGETKEFGDE
SKLQDKIFITQQIAISDSSGEVVLPTIPKEPQESDTGTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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