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Report for CCDS24079.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24079.1 Public Mus musculus 10 Nuak1 23 108 98 CCDS HistoryNCBI Gene:77976Re-query CCDS DB by CCDS ID:24079.1Re-query CCDS DB by GeneID:77976See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24079.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020220.14 ENSMUSP00000020220.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020220.14Link to Ensembl Protein Viewer:ENSMUSP00000020220.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000020220Re-query CCDS DB by Protein ID:ENSMUSP00000020220
Original member Current member NCBI NM_001004363.2 NP_001004363.1 Accepted alive Link to Nucleotide Sequence:NM_001004363.2Link to Protein Sequence:NP_001004363.1Re-query CCDS DB by Nucleotide ID:NM_001004363Re-query CCDS DB by Protein ID:NP_001004363Link to BLAST:NP_001004363.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004363.1 658 Q641K5 658 100% 0 0

Chromosomal Locations for CCDS 24079.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 84374246 84375387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84378092 84378224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84380747 84380866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84392256 84392321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84393992 84394143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84409616 84409736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84440115 84440357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1977 nt):
ATGGAAGGGGCGGCAGTGTCCGCGGCAGGGGATGGCCCTGCTGTAGAGACCGGCTTGCCGGGCTCTCCGC
TGGAGGCGGTGGCCGGGGCGACTGCAGCCCCAGTGGAGCCCAGGAAGCCGCACGGGGTGAAGCGACATCA
CCACAAACACAACTTGAAGCATCGCTATGAGCTGCAAGAGACCCTGGGCAAAGGTACCTACGGCAAAGTC
AAGAGAGCCACCGAGAGGTTTTCAGGCCGAGTGGTTGCTATAAAATCCATCCGTAAGGACAAAATTAAGG
ACGAGCTAGACATGGTTCACATCAGACGAGAGATTGAGATCATGTCATCCCTCAACCATCCTCATATCAT
CAGTATTTATGAAGTGTTTGAGAACAAAGATAAGATTGTGATCATCATGGAATATGCCAGCAAAGGAGAG
CTGTATGATTACATCAGTGAGCGCAGGCGCCTCAGCGAGAGGGAGACCAGACACTTCTTCCGGCAGATTG
TGTCTGCCGTGCATTACTGTCACAAGAATGGTGTGGTCCACCGGGACTTGAAGCTGGAGAACATACTGCT
TGATGACAACTGCAACATTAAGATTGCTGACTTTGGGCTCTCCAACCTGTACCAGAAGGACAAGTTCTTG
CAAACATTTTGTGGGAGCCCACTCTATGCGTCGCCCGAGATTGTCAACGGCAGGCCTTACCGAGGGCCAG
AGGTGGACAGCTGGGCCCTGGGTGTCTTGCTTTACACTCTCATTTATGGAACGATGCCCTTCGATGGCTT
TGATCACAAAAACCTCATCCGGCAGATCAGCAGCGGAGAGTACCGGGAGCCCACACAACCCTCAGATGCT
CGGGGACTCATCCGGTGGATGCTGATGGTGAATCCCGATCGCAGAGCCACCATCGAGGACATCGCCAACC
ATTGGTGGGTGAACTGGGGCTACAAGAGCAGCGTCTGTGACTGTGATGCCCTTCCTGACTCTGAGTCTCC
ACTCTTGGCACGGATCATCGATTGGCATCACCGTTCCACGGGGCTGCAGGCTGAGGCTGAAGCCAAGATG
AAGGGTCTGGCCAAACCCGGGGCCTCTGAGGTTGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGA
AAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAG
GCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACAGCACTGGCTTTATCGAAGGC
ATTGTGAGCCCTGCCTTACCATCCCCTTTCAAAATGGAGCAAGATTTGTGCCGGACTGCCATCCCCCTCC
CCAGCTCCCCCGAGGCAGATATGTCAGGGAAGCTCAGCCTCAAACAGTCTGCCACGATGCCCAAGAAAGG
CATCTTGAAAAAGACCCAGCAGAGAGAATCTGGCTACTATTCATCCCCAGAGCGCAGCGAGTCCTCGGAA
CTGCTGGACAGCAACGATGTGGTCATCAGTGGTGGCCTCTCGTCCCCTCCCCCAGACCCAGCCAGGGGAA
CTTCCCACAGCCTGTCCTGCCGGAGGAAGGGCATCTTAAAACATAGTAGCAGGTACTCAGATGGTGGCAC
AGACCCTGCCCTCACCCGCCCTGAAATGCCCACACTGGAATCCTTGTCACCTCCCGGTGTCCCCTCCGAT
GGCATCTCTCGGAGCTACAGTCGCCCGTCCAGTATCATCAGTGATGACAGTGTCCTGTCCAGCGACTCTT
TCGACTTGTTAGAGCTTCAAGAGAACCGGCCAGCCCGCCAGCGCATCCGCAGCTGCGTCTCTGCTGAAAA
CTTCCTCCAGCTTCAGGACTTTGAGACACCACACAACCGGCCCCGGCCCCAGTACCTGAAGCGGCTGGCA
GACAGTAGCTTCTCCCTTCTCACTGATATGGACGATGTGACTCAGGTGTATAAGAAAGCGCTGGAGATCT
GCAGCAAGCTCAACTAG

Translation (658 aa):
MEGAAVSAAGDGPAVETGLPGSPLEAVAGATAAPVEPRKPHGVKRHHHKHNLKHRYELQETLGKGTYGKV
KRATERFSGRVVAIKSIRKDKIKDELDMVHIRREIEIMSSLNHPHIISIYEVFENKDKIVIIMEYASKGE
LYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLSNLYQKDKFL
QTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLIYGTMPFDGFDHKNLIRQISSGEYREPTQPSDA
RGLIRWMLMVNPDRRATIEDIANHWWVNWGYKSSVCDCDALPDSESPLLARIIDWHHRSTGLQAEAEAKM
KGLAKPGASEVVLERQRSLKKSKKENDFPQSGQDSVPESPSKLSSKRPKGILKKRSNSEHRSHSTGFIEG
IVSPALPSPFKMEQDLCRTAIPLPSSPEADMSGKLSLKQSATMPKKGILKKTQQRESGYYSSPERSESSE
LLDSNDVVISGGLSSPPPDPARGTSHSLSCRRKGILKHSSRYSDGGTDPALTRPEMPTLESLSPPGVPSD
GISRSYSRPSSIISDDSVLSSDSFDLLELQENRPARQRIRSCVSAENFLQLQDFETPHNRPRPQYLKRLA
DSSFSLLTDMDDVTQVYKKALEICSKLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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