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Report for CCDS1615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1615.1 Public Homo sapiens 1 ZP4 24 110 108 CCDS HistoryNCBI Gene:57829Re-query CCDS DB by CCDS ID:1615.1Re-query CCDS DB by GeneID:57829See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1615.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366570.5 ENSP00000355529.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366570.5Link to Ensembl Protein Viewer:ENSP00000355529.4Re-query CCDS DB by Nucleotide ID:ENST00000366570Re-query CCDS DB by Protein ID:ENSP00000355529
Original member Current member EBI ENST00000611898.4 ENSP00000482304.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611898.4Link to Ensembl Protein Viewer:ENSP00000482304.1Re-query CCDS DB by Nucleotide ID:ENST00000611898Re-query CCDS DB by Protein ID:ENSP00000482304
Original member Current member NCBI NM_021186.5 NP_067009.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021186.5Link to Protein Sequence:NP_067009.1Re-query CCDS DB by Nucleotide ID:NM_021186Re-query CCDS DB by Protein ID:NP_067009Link to BLAST:NP_067009.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067009.1 540 Q12836 540 100% 0 0

Chromosomal Locations for CCDS 1615.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 237882422 237882549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237882742 237882846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237884769 237884847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237885165 237885315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237885391 237885580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237885756 237885886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237886771 237886868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237887374 237887561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237888358 237888510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237889867 237889969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237890055 237890176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 237890461 237890635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1623 nt):
ATGTGGCTGCTGCGGTGCGTTTTGCTGTGTGTTTCATTATCTCTTGCTGTGAGTGGCCAGCATAAGCCTG
AGGCACCAGATTATTCCAGTGTGCTCCACTGTGGGCCGTGGAGCTTCCAGTTTGCTGTAAACCTCAACCA
GGAGGCAACGTCTCCTCCTGTACTAATAGCTTGGGACAACCAAGGGCTGCTGCACGAGCTGCAGAATGAC
TCCGACTGTGGCACCTGGATAAGAAAAGGTCCAGGCAGCTCCGTGGTGTTGGAGGCAACCTATAGCAGCT
GCTATGTCACTGAGTGGGACTCCCACTACATCATGCCAGTTGGAGTTGAAGGAGCAGGCGCGGCTGAACA
CAAGGTGGTTACAGAGAGGAAGCTGCTCAAGTGTCCTATGGATCTTCTAGCCCGAGATGCTCCAGATACT
GACTGGTGTGACTCCATCCCAGCACGGGACAGACTGCCATGTGCACCTTCACCCATCTCTCGAGGAGACT
GTGAAGGGCTAGGCTGTTGTTATAGCTCTGAAGAGGTGAATTCCTGCTACTATGGAAACACTGTGACCTT
GCATTGTACCCGAGAGGGCCATTTCTCTATTGCTGTGTCTCGGAACGTGACCTCGCCACCACTGCTCTTG
GATTCTGTGCGCTTGGCCCTTAGGAATGACAGTGCGTGTAACCCTGTGATGGCAACACAAGCTTTTGTTC
TGTTCCAGTTTCCATTTACTTCCTGTGGCACCACAAGACAGATCACTGGAGACCGAGCAGTATATGAAAA
TGAACTGGTGGCAACTAGGGATGTGAAAAATGGGAGCCGTGGCTCTGTCACTCGTGACAGCATCTTCAGG
CTCCATGTCAGCTGCAGCTACTCAGTAAGTAGCAACTCTCTCCCAATCAATGTCCAGGTTTTCACTCTCC
CACCACCCTTTCCTGAGACCCAGCCTGGACCCCTCACTCTGGAACTTCAGATTGCCAAAGATAAAAACTA
TGGCTCTTACTACGGTGTTGGTGACTACCCAGTGGTGAAGTTGCTTCGGGATCCCATTTACGTGGAGGTC
TCCATCCTTCACAGAACAGACCCCTACCTGGGGCTGCTCCTACAACAGTGTTGGGCAACACCCAGCACTG
ACCCCCTGAGTCAGCCACAGTGGCCCATCCTGGTAAAGGGCTGCCCCTACATTGGAGACAACTATCAGAC
CCAGCTGATCCCTGTCCAGAAAGCCTTGGATCTTCCATTTCCCTCTCACCACCAGCGCTTCAGCATCTTC
ACCTTCAGCTTTGTGAACCCTACAGTGGAGAAACAGGCCCTCAGGGGACCGGTGCATCTGCACTGCAGCG
TGTCAGTCTGCCAGCCTGCTGAGACACCATCCTGTGTGGTGACCTGTCCTGATCTCAGTCGAAGAAGAAA
TTTTGACAACAGTTCTCAGAACACTACTGCTAGTGTTTCTAGCAAAGGCCCCATGATTCTACTCCAAGCC
ACTAAGGACCCTCCAGAAAAGCTCCGTGTTCCTGTAGACTCGAAAGTTCTGTGGGTGGCAGGCCTTTCTG
GGACCTTAATCCTTGGAGCCTTGTTAGTATCCTACTTGGCTGTCAAGAAACAGAAGAGTTGCCCAGACCA
AATGTGTCAATAA

Translation (540 aa):
MWLLRCVLLCVSLSLAVSGQHKPEAPDYSSVLHCGPWSFQFAVNLNQEATSPPVLIAWDNQGLLHELQND
SDCGTWIRKGPGSSVVLEATYSSCYVTEWDSHYIMPVGVEGAGAAEHKVVTERKLLKCPMDLLARDAPDT
DWCDSIPARDRLPCAPSPISRGDCEGLGCCYSSEEVNSCYYGNTVTLHCTREGHFSIAVSRNVTSPPLLL
DSVRLALRNDSACNPVMATQAFVLFQFPFTSCGTTRQITGDRAVYENELVATRDVKNGSRGSVTRDSIFR
LHVSCSYSVSSNSLPINVQVFTLPPPFPETQPGPLTLELQIAKDKNYGSYYGVGDYPVVKLLRDPIYVEV
SILHRTDPYLGLLLQQCWATPSTDPLSQPQWPILVKGCPYIGDNYQTQLIPVQKALDLPFPSHHQRFSIF
TFSFVNPTVEKQALRGPVHLHCSVSVCQPAETPSCVVTCPDLSRRRNFDNSSQNTTASVSSKGPMILLQA
TKDPPEKLRVPVDSKVLWVAGLSGTLILGALLVSYLAVKKQKSCPDQMCQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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