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NM_000212.3(ITGB3):c.2134+1G>C AND Bleeding disorder, platelet-type, 24

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 1, 2009
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000043481.30

Allele description [Variation Report for NM_000212.3(ITGB3):c.2134+1G>C]

NM_000212.3(ITGB3):c.2134+1G>C

Gene:
ITGB3:integrin subunit beta 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q21.32
Genomic location:
Preferred name:
NM_000212.3(ITGB3):c.2134+1G>C
HGVS:
  • NC_000017.11:g.47302841G>C
  • NG_008332.2:g.54000G>C
  • NM_000212.3:c.2134+1G>CMANE SELECT
  • LRG_481t1:c.2134+1G>C
  • LRG_481:g.54000G>C
  • NC_000017.10:g.45380207G>C
  • NM_000212.2:c.2134+1G>C
Nucleotide change:
IVS13DS, G-C, +1
Links:
OMIM: 173470.0019; dbSNP: rs398122373
NCBI 1000 Genomes Browser:
rs398122373
Molecular consequence:
  • NM_000212.3:c.2134+1G>C - splice donor variant - [Sequence Ontology: SO:0001575]

Condition(s)

Name:
Bleeding disorder, platelet-type, 24
Synonyms:
GLANZMANN THROMBASTHENIA-LIKE WITH MACROTHROMBOCYTOPENIA 2
Identifiers:
MONDO: MONDO:0030996; MedGen: C5543280; OMIM: 619271

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000067293OMIM
no assertion criteria provided
Pathogenic
(May 1, 2009)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Dominant inheritance of a novel integrin beta3 mutation associated with a hereditary macrothrombocytopenia and platelet dysfunction in two Italian families.

Gresele P, Falcinelli E, Giannini S, D'Adamo P, D'Eustacchio A, Corazzi T, Mezzasoma AM, Di Bari F, Guglielmini G, Cecchetti L, Noris P, Balduini CL, Savoia A.

Haematologica. 2009 May;94(5):663-9. doi: 10.3324/haematol.2008.002246. Epub 2009 Mar 31.

PubMed [citation]
PMID:
19336737
PMCID:
PMC2675678

Details of each submission

From OMIM, SCV000067293.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

In affected members of 2 unrelated Italian families with autosomal dominant platelet-type bleeding disorder-24 (BDPLT24; 619267), Gresele et al. (2009) identified a heterozygous G-to-C transversion in intron 13 of the ITGB3 gene (c.2134+1G-C), resulting in an in-frame 120-bp deletion in exon 13, with loss of 40 residues from the extracellular domain (asp647_glu686del). The mutation segregated with the phenotype in the family and was not found in 150 unrelated controls. Haplotype analysis suggested a founder effect. Clinical features included lifelong bleeding tendency, particularly mucosal bleeding, and macrothrombocytopenia. Patient platelets showed decreased expression of the GPIIb/IIIa complex. Functional studies showed several abnormalities, including impaired platelet aggregation to physiologic agonists but not to ristocetin, normal clot retraction, reduced fibrinogen binding and reduced expression of activated GPIIb/IIIa upon stimulation, normal platelet adhesion to immobilized fibrinogen but reduced platelet spreading, and decreased tyrosine phosphorylation, indicating defective outside-in signaling. Spontaneous aggregation was absent. The concomitant presence of both the normal and a mutant ITGB3 allele in patient platelet lysates suggested a loss-of-function hypothesis with a dominant-negative effect.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 20, 2024