1IRU


Conserved Protein Domain Family
proteasome_alpha_type_2

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cd03750: proteasome_alpha_type_2 
Click on image for an interactive view with Cn3D
proteasome_alpha_type_2. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239719
Aligned: 21 rows
Threshold Bit Score: 341.994
Created: 12-Jun-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitealpha subunit
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #               # #            #                    
1IRU_P         5 YSFSLTTFSPSGKLVQIEYALAAVAGG-APSVGIKAANGVVLATEKKQKSILYdersvHKVEPITKHIGLVYSGMGPDYR 83  cattle
Q9U793         4 SSYGLTTFSPSGRLVQIEYATTAASKG-TTALGVKATDGVVIAAEKKTTSPLAdsltlHKVFALDDHVGCTYSGIGPDCR 82  Trypanosoma bru...
XP_966075      6 YSFSLTTFSPTGKLVQIEYALNRVSSS-SPALGIRAKNGVIIATEKKSPNELIeensiFKIQQISEHIGIVYAGMPGDFR 84  Plasmodium falc...
XP_628529     52 YSFSLTTFSPSGKLVQIEYALNAVNSQgRPALGIKARNGVVIATEKKVASPLVeehsiRKVELITSEIGCCFAGMPADFR 131 Cryptosporidium...
XP_629845      5 YSFSLTTFSPSGKLVQIEHALQAAASG-GSAIGIKAKNGVVLITEKKLHSLVDvt-svQKISMITENIGLVYAGMGPDSR 82  Dictyostelium d...
EAA38727       6 YSFSLTTFSPSGHLRQITYALAAVDGG-RLSIGIKCANGVVLMCHKAAENPLVdyptiSLVDNVSPSLGITYSGFSADFR 84  Giardia lamblia...
XP_655350      8 YGFSLTTFSPSGKLVQIEYALNAISAG-STSVGIKAKDGIVLAVEKSLPPMYIse-siQKINHLCDSVGMVSSGMGPDAR 85  Entamoeba histo...
CAA21440       5 YAFSLTTFSPNGKLVQIEYALNAVNAG-VTSVGIKATDGVVLATEKKPTSELAigaslEKVCAITPDIGMVYSGMGPDFR 83  fission yeast
NP_001031057   6 YSFSLTTFSPSGKLVQIEHALTAVGSG-QTSLGIKASNGVVIATEKKLPSILVdeasvQKIQHLTPNIGVVYSGMGPDFR 84  thale cress
Q9LSU2         6 YSFSLTTFSPSGKLVQIEHALTAVGSG-QTSLGIKAANGVVIATEKKLPSILVdetsvQKIQSLTPNIGVVYSGMGPDFR 84  rice
Feature 1                                                                                        
1IRU_P        84 VLVHRARKLAQQ-YYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNeg-------------rPYLFQSD 149 cattle
Q9U793        83 VLVDAARRACQR-YRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADsr-------------gNHLYQLD 148 Trypanosoma bru...
XP_966075     85 VLLKRARKEAIR-YSLQYGSEILVKELVKIIASIVQEFTQTGGVRPFGLSLLICGVDvy-------------gYHLYQID 150 Plasmodium falc...
XP_628529    132 VILKKSRKIAQV-YYNTYREQIPVCELVREIATVMQEFTQSGGVRPFGISLLVAGFDst------------rgPQLFQVD 198 Cryptosporidium...
XP_629845     83 VLIKKARKESEK-YYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDek-------------gPHLYQVD 148 Dictyostelium d...
EAA38727      85 NLLNLGRKSYEQ-YWNEFQESMPVNMLARDIASTMQEYTQRGGVRPFGCSVLLAGKSmateheteangsrinpYILYQVD 163 Giardia lamblia...
XP_655350     86 VLVKKGRKEGQK-YWLEYQEDINCSMMTRKLAYLMQEYTQKGGVRPFGVSVLVAGFDgk-------------tPRLYQVD 151 Entamoeba histo...
CAA21440      84 VLVDKSRKVAQTtYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDek-------------gPSLYQVD 150 fission yeast
NP_001031057  85 VLVRKSRKQAEQ-YLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDdk-------------gPQLYQVD 150 thale cress
Q9LSU2        85 VLVRKSRKQAQQ-YYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDdn-------------gPQLYQVD 150 rice
Feature 1                      #                                                                 
1IRU_P       150 PSGAYFAWKATAMGKNYVNGKTFLEKRYnedleLEDAIHTAILTLKESFEGQMTEDNIEVGICne------------agF 217 cattle
Q9U793       149 PSGTFWTWKATSIGKGSPDARTFLEKRYtnemeIEDAVHTALLTLKEGFDGRMTAENTQVGRVve------------grF 216 Trypanosoma bru...
XP_966075    151 PSGCYFNWMATCVGKDYQNNMSFLEKRYnkdieIEDAIHTAILTLKESYEGVLNEKNIEIGVAydn-----------kpF 219 Plasmodium falc...
XP_628529    199 PSGAYFGWKASAIGKDMQNAKSFLEKRYnpdveIEDALHTALLTLKECFEGAMNEDNIEVGIIged-----------knF 267 Cryptosporidium...
XP_629845    149 PSGSYFAWKATAIGKNMVSSKTFLEKRYsddleIEDAIQTALITIKEGFETQLTEFNMELAIIgkn-----------qeF 217 Dictyostelium d...
EAA38727     164 SSGSYYTWKACANGNQSSQARDFLEKRYnesvsISDGILIGLTCLHEYVDGDIDGKTVEIGIIgdet---------ggqF 234 Giardia lamblia...
XP_655350    152 PSGSFWTWKATALGKNMTSVKTFLEKRYhddieLEDAIHTAILALKEGFEGEMNEHNIEIGLCtke-----------ngF 220 Entamoeba histo...
CAA21440     151 PSGTYFAWKATAIGKSSTAAKTFLEKRYndeleLDDAVHTAILALKETFEGELTEDNIEIAVVstkptdsgivgvpgghF 230 fission yeast
NP_001031057 151 PSGSYFSWKASAMGKNVSNAKTFLEKRYtedmeLDDAIHTAILTLKEGFEGEISSKNIEIGKIgad-----------kvF 219 thale cress
Q9LSU2       151 PSGSYFSWKASAMGKNVSNAKTFLEKRYtedmeLDDAIHTAILTLKEGYEGQISANNIEIGIIrsd-----------reF 219 rice
Feature 1                     
1IRU_P       218 RRLTPTEVKDYLA 230 cattle
Q9U793       217 ELLTVEQLKDYLD 229 Trypanosoma brucei brucei
XP_966075    220 KILTQNEIKDYLI 232 Plasmodium falciparum 3D7
XP_628529    268 TILSPQEIKDYLG 280 Cryptosporidium parvum Iowa II
XP_629845    218 KILTPAQIKDYLL 230 Dictyostelium discoideum AX4
EAA38727     235 RLLAADEINTYAR 247 Giardia lamblia ATCC 50803
XP_655350    221 KVLTPSEIRDYLD 233 Entamoeba histolytica HM-1:IMSS
CAA21440     231 CRLSQSEIRDYLD 243 fission yeast
NP_001031057 220 RVLTPAEIDDYLA 232 thale cress
Q9LSU2       220 KVLSPAEIKDFLE 232 rice

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