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Hi v1.0

Organism name:
Haematobia irritans (horn fly)
Infraspecific name:
Strain: Kerrville in vitro susceptible
Sex:
pooled male and female
BioSample:
SAMN07830356
BioProject:
PRJNA30967
Submitter:
USDA - Agricultural Research Service, USA
Date:
2018/05/14
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003123925.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PGFW01
Assembly method:
SOAPdenovo v. 2
Expected final version:
yes
Genome coverage:
1.0x
Sequencing technology:
Illumina HiSeq; PacBio

IDs: 1699521 [UID] 6491918 [GenBank]

See Genome Information for Haematobia irritans

History (Show revision history)

Comment

Global statistics

Total sequence length1,143,537,531
Total ungapped length603,553,090
Gaps between scaffolds0
Number of scaffolds76,616
Scaffold N5023,099
Scaffold L5014,394
Number of contigs215,787
Contig N505,359
Contig L5034,557
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)76,616

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,143,537,53176,616603,553,09023,099139,1710