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3C2A: 
Antibody Fab fragment 447-52D in complex with UG1033 peptide
Biological unit 1: trimeric
Source organism: Human immunodeficiency virus 1, ▼
Taxonomy
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Taxonomy Molecule
Human immunodeficiency virus 1 P
Homo sapiens L, H
Number of proteins:
3 (Envelope glycoprotein, Fab 447-52D heavy chain,... ▼)
Protein molecule
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LL -Click to explore this molecule neighbors
 Fab 447-52D light chain
HH -Click to explore this molecule neighbors
 Fab 447-52D heavy chain
PP -Click to explore this molecule neighbors
 Envelope glycoprotein
Similar Structures (6200)help
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Showing 1 to 10 out of 6200 selected structures help
      PDB ID Description Taxonomy▲▼ Aligned Protein▲▼ RMSD▲▼ Aligned Residues▲▼ Sequence Identity▲▼
1
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Partial
 3GHB
Crystal structure of anti-HIV-1 Fab 447-52D in complex with V3 peptide W2RW020
Others
 2 0.24Å 446 100%
2
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Partial
 4M1D
Crystal Structure Of Anti-hiv-1 Fab 447-52d In Complex With V3 Cyclic Peptide Mn
Others
 2 1.40Å 446 97%
3
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Partial
 1Q1J
Crystal Structure Analysis of anti-HIV-1 Fab 447-52D in complex with V3 peptide
Others
 2 0.62Å 445 100%
4
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Partial
 2B1A
Crystal structure analysis of anti-HIV-1 V3 Fab 2219 in complex with UG1033 peptide
Others
 2 2.05Å 435 76%
5
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Partial
 2B1H
Crystal structure analysis of anti-HIV-1 V3 Fab 2219 in complex with UG29 peptide
Others
 2 2.09Å 435 76%
6
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Partial
 3THM
Crystal structure of Fas receptor extracellular domain in complex with Fab EP6b_B01
Homo sapiens
 2 2.39Å 435 77%
7
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Partial
 3MME
Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Homo sapiens
 2 1.88Å 434 76%
8
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Partial
 3TJE
Crystal structure of Fas receptor extracellular domain in complex with Fab E09
Homo sapiens
 2 2.29Å 433 77%
9
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Partial
 3MUG
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
Homo sapiens
 2 1.80Å 432 77%
10
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Partial
 3U4E
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45
Others
 2 2.30Å 432 77%
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{"1":"Fab 447-52D light chain","2":"Fab 447-52D heavy chain","3":"Envelope glycoprotein"}
Citing VAST
Gibrat JF, Madej T, Bryant SH. "Surprising similarities in structure comparison.", Curr Opin Struct Biol.1996 Jun;6(3):377-85
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. "MMDB and VAST+: tracking structural similarities between macromolecular complexes." Nucl. Acids Res. 2014 Jan;42(Database issue):D297-303
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.