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2DP6: 
Crystal structure of uracil-DNA glycosylase in complex with AP:C containing DNA
Biological unit 1: trimeric
Source organism: Thermus thermophilus HB8, ▼
Taxonomy
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Taxonomy Molecule
Thermus thermophilus HB8 A
synthetic construct C, D
Number of proteins:
1 (uracil-DNA glycosylase)
Number of nucleotides:
2 (5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*T... ▼)
Nucleotide molecule
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5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP...
5'-D(*GP*GP*AP*CP*TP*AP*AP*CP*GP*CP*AP*AP*CP*A)-3'
Number of chemicals:
6 (DIHYDROGENPHOSPHATE ION (2),ETHANOL,GLYCEROL (2... ▼)
Chemical
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DIHYDROGENPHOSPHATE ION (2)
ETHANOL
GLYCEROL (2)
IRON/SULFUR CLUSTER
No VAST+ neighbors available.help
Citing VAST
Gibrat JF, Madej T, Bryant SH. "Surprising similarities in structure comparison.", Curr Opin Struct Biol.1996 Jun;6(3):377-85
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. "MMDB and VAST+: tracking structural similarities between macromolecular complexes." Nucl. Acids Res. 2014 Jan;42(Database issue):D297-303
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.