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6ONC: 
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase produced without CooC, as-isolated
Biological unit 1: dimeric
Source organism: Nitratidesulfovibrio vulgaris
Number of proteins:
2 (Carbon monoxide dehydrogenase ▼)
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 Carbon monoxide dehydrogenase
Number of chemicals:
Similar Structures (350)help
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Showing 1 to 10 out of 350 selected structures help
      PDB ID Description Taxonomy▲▼ Aligned Protein▲▼ RMSD▲▼ Aligned Residues▲▼ Sequence Identity▲▼
1
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 6OND
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase produced without CooC, reduced
Nitratidesulfovibrio vulgaris
 2 0.15Å 1251 100%
2
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 6B6W
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase, as-isolated (protein batch 2), oxidized C-cluster
Nitratidesulfovibrio vulgaris
 2 0.29Å 1251 100%
3
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 6DC2
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase C301S variant
Nitratidesulfovibrio vulgaris
 2 0.14Å 1250 99%
4
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 6B6V
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase, as-isolated (protein batch 1), canonical C-cluster
Nitratidesulfovibrio vulgaris
 2 0.33Å 1250 100%
5
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 6VWY
Crystal structure of C45G/T50C D. vulgaris carbon monoxide dehydrogenase (anaerobic)
Nitratidesulfovibrio vulgaris str. Hildenborough
 2 0.36Å 1250 99%
6
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 6B6X
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase, dithionite-reduced (protein batch 2), canonical C-cluster
Nitratidesulfovibrio vulgaris
 2 0.28Å 1249 100%
7
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 6VX0
Crystal structure of air-exposed C45G/T50C D. vulgaris carbon monoxide dehydrogenase (2 hour air exposure)
Nitratidesulfovibrio vulgaris str. Hildenborough
 2 0.41Å 1249 99%
8
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 6VWZ
Crystal structure of air-exposed C45G/T50C D. vulgaris carbon monoxide dehydrogenase (20 minute air exposure)
Nitratidesulfovibrio vulgaris str. Hildenborough
 2 0.42Å 1249 99%
9
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 6VX1
Crystal structure of air-exposed C45G/T50C D. vulgaris carbon monoxide dehydrogenase (2 day air exposure)
Nitratidesulfovibrio vulgaris str. Hildenborough
 2 0.44Å 1246 99%
10
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 6ONS
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase with the D-cluster ligating cysteines mutated to alanines, coexpressed with CooC, as-isolated
Nitratidesulfovibrio vulgaris
 2 0.49Å 1242 99%
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{"1":"Carbon monoxide dehydrogenase","2":"Carbon monoxide dehydrogenase"}
Citing VAST
Gibrat JF, Madej T, Bryant SH. "Surprising similarities in structure comparison.", Curr Opin Struct Biol.1996 Jun;6(3):377-85
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. "MMDB and VAST+: tracking structural similarities between macromolecular complexes." Nucl. Acids Res. 2014 Jan;42(Database issue):D297-303
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.