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6JYL:
The crosslinked complex of ISWI-nucleosome in the ADP.BeF-bound state
PDB ID:
6JYL
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MMDB ID:
175839
PDB Deposition Date:
2019/4/26
Updated in MMDB:
2019/06
Experimental Method:
electron microscopy
Resolution:
3.37 Å
Source Organism:
Saccharomyces cerevisiae S288C
▼
Taxonomy
Molecule
Saccharomyces cerevisiae S288C
K
Escherichia coli K-12
I, J
Xenopus laevis
A, B, C, D, E, F, G, H
Similar Structures:
VAST+
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Biological Unit for 6JYL: undecameric; determined by author
Molecular Components in 6JYL
Label
Count
Molecule
Proteins (9 molecules)
A
E
2
Histone H3
B
F
2
Histone H4
C
G
2
Histone H2A
D
H
2
Histone H2B 1.1
K
1
Iswi Chromatin-remodeling Complex Atpase Isw1
Nucleotides(2 molecules)
I
1
DNA (167-mer)
J
1
DNA (167-mer)
Chemicals and Non-standard biopolymers (3 molecules)
1
1
ADENOSINE-5'-DIPHOSPHATE
2
1
BERYLLIUM TRIFLUORIDE ION
3
1
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303