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Taxonomy browser (Xenopus laevis)

Xenopus laevis

Taxonomy ID: 8355 (for references in articles please use NCBI:txid8355)
Scientific name: Xenopus laevis (Daudin, 1802)
homotypic synonym: Bufo laevis
Genbank common name: African clawed frog
Inherited blast name: frogs & toads
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
common name: clawed frog
common name: common platanna
common name: platanna
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,059,282 1,059,272
Nucleotide EST 340,426 340,426
Protein 130,923 130,917
Structure 280 280
Genome 1 1
Popset 104 104
GEO Datasets 2,349 2,349
UniGene 31,306 31,306
PubMed Central 22,414 22,414
Gene 38,536 38,536
SRA Experiments 1,168 1,148
GEO Profiles 184,986 184,986
Protein Clusters 9 9
Identical Protein Groups 83,911 83,909
Bio Project 200 198
Bio Sample 1,546 1,534
Bio Systems 348 348
Assembly 1 1
Probe 75 75
PubChem BioAssay 936 936
Taxonomy 3 1

Comments and References:

Cannatella & De Sa (1993)
Cannatella,D.C. and de Sa,R. "Xenopus laevis as a model organism." Systematic Biology 42 (4) 476-507 (1993)


Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Xenopus laevis
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
EST RT-PCR ALL
ABC - Agencourt Bioscience Corporation
222,104 - 222,104
BCCAGSC - British Columbia Cancer Agency Genome Sciences Centre
- 13,047 13,047
WUGSC - Washington University, Genome Sequencing Center
53,111 - 53,111
Totals per type
275,215 13,047 288,262

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xenopus laevis taxonomy/phylogenetic AmphibiaWeb
Xenopus laevis Daudin, 1802 taxonomy/phylogenetic Amphibian Species of the World
Xenopus laevis taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Xenopus laevis taxonomy/phylogenetic Barcodes of Life
Xenopus laevis taxonomy/phylogenetic CalPhotos
2 records from this provider supplemental materials Dryad Digital Repository
Xenopus laevis (Daudin, 1802) taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Xenopus laevis (Daudin, 1802) taxonomy/phylogenetic Integrated Taxonomic Information System
Xenbase taxonomy/phylogenetic NCBI taxonomy bookmarks
plazi taxonomy/phylogenetic Plazi
Xenopus laevis taxonomy/phylogenetic TreeBase
WebScipio: Xenopus laevis organism-specific WebScipio - eukaryotic gene identification
diArk: Xenopus laevis organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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