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5A3W:
Crystal structure of human PLU-1 (JARID1B) in complex with Pyridine-2, 6-dicarboxylic Acid (PDCA)
PDB ID:
5A3W
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MMDB ID:
130203
PDB Deposition Date:
2015/6/3
Updated in MMDB:
2016/07
Experimental Method:
x-ray diffraction
Resolution:
2 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5A3W: monomeric; determined by author and by software (PISA)
Molecular Components in 5A3W
Label
Count
Molecule
Protein (1 molecule)
A
1
Lysine-specific Demethylase 5B
(Gene symbol:
KDM5B
)
Chemicals and Non-standard biopolymers (10 molecules)
1
2
ZINC ION
2
1
SODIUM ION
3
1
PYRIDINE-2,4-DICARBOXYLIC ACID
4
1
MANGANESE (II) ION
5
1
PHOSPHATE ION
6
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
7
3
1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303