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Conserved domains on  [gi|1207117801|ref|XP_021321964|]
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zinc finger and SCAN domain containing 2-like isoform X1 [Danio rerio]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 12142358)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
257-674 1.27e-10

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 64.33  E-value: 1.27e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 257 KNHVCLECGKSFIRAEQLKNHRRIHTGEKPYKCSY--CEKSFSWSSNLKLHERVHTGEKPYYCPACQKSFRSSQNLLNHT 334
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 335 RKCHtiteikmefveeeIDDLGDSETSRIYKQEETEEQTDPkEVKQENLELNEDEDFLHGEPeNNSQTTDTKNSFSCPHC 414
Cdd:COG5048   112 SSSS-------------NSNDNNLLSSHSLPPSSRDPQLPD-LLSISNLRNNPLPGNNSSSV-NTPQSNSLHPPLPANSL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 415 DRSFTLEASLISHSSIHSRERPYTCPQCPKSFARKDSLRMHLRLHTGEKPYACPQCAKAF------AQKEHLTIHIRIHT 488
Cdd:COG5048   177 SKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllsQSPSSLSSSDSSSS 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 489 GEKPFVCDQCGSSFARSDSLKNHSRIHTG-VKPYSCPHCAKRFTWLHNFRKHIRLHS----GVKPYSC--EDCGKKFPSA 561
Cdd:COG5048   257 ASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSVNhsgeSLKPFSCpySLCGKLFSRN 336

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 562 SVLKYHMQSHSEERPHSC--STCGKSFIQLDAFKMHQKLH-----SGVRPFVCSH--CGKSFNKASNLTEHFRIHTGEKP 632
Cdd:COG5048   337 DALKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLSnsCIRNFKRDSNLSLHIITHLSFRP 416

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1207117801 633 --YTCSLCGKSFTHSATLKAHERIHTGEKPHHCTQCGKSFGRAS 674
Cdd:COG5048   417 ynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
zf-H2C2_2 pfam13465
Zinc-finger double domain;
161-186 5.94e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.94e-04
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 161 HLRRHERIHTGEKPYLCTHCGESFRY 186
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
133-158 2.05e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 2.05e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 133 NLKRHRIIHAGEKPHKCSYCEKSFNQ 158
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
257-674 1.27e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 64.33  E-value: 1.27e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 257 KNHVCLECGKSFIRAEQLKNHRRIHTGEKPYKCSY--CEKSFSWSSNLKLHERVHTGEKPYYCPACQKSFRSSQNLLNHT 334
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 335 RKCHtiteikmefveeeIDDLGDSETSRIYKQEETEEQTDPkEVKQENLELNEDEDFLHGEPeNNSQTTDTKNSFSCPHC 414
Cdd:COG5048   112 SSSS-------------NSNDNNLLSSHSLPPSSRDPQLPD-LLSISNLRNNPLPGNNSSSV-NTPQSNSLHPPLPANSL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 415 DRSFTLEASLISHSSIHSRERPYTCPQCPKSFARKDSLRMHLRLHTGEKPYACPQCAKAF------AQKEHLTIHIRIHT 488
Cdd:COG5048   177 SKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllsQSPSSLSSSDSSSS 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 489 GEKPFVCDQCGSSFARSDSLKNHSRIHTG-VKPYSCPHCAKRFTWLHNFRKHIRLHS----GVKPYSC--EDCGKKFPSA 561
Cdd:COG5048   257 ASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSVNhsgeSLKPFSCpySLCGKLFSRN 336

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 562 SVLKYHMQSHSEERPHSC--STCGKSFIQLDAFKMHQKLH-----SGVRPFVCSH--CGKSFNKASNLTEHFRIHTGEKP 632
Cdd:COG5048   337 DALKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLSnsCIRNFKRDSNLSLHIITHLSFRP 416

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1207117801 633 --YTCSLCGKSFTHSATLKAHERIHTGEKPHHCTQCGKSFGRAS 674
Cdd:COG5048   417 ynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
PHA00733 PHA00733
hypothetical protein
 286-340 5.05e-04

hypothetical protein


Pssm-ID: 177301  Cd Length: 128  Bit Score: 40.63  E-value: 5.05e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1207117801 286 PYKCSYCEKSFSWSSNLKLHERVHTGEKpyYCPACQKSFRSSQNLLNHTRKCHTI 340
Cdd:PHA00733   73 PYVCPLCLMPFSSSVSLKQHIRYTEHSK--VCPVCGKEFRNTDSTLDHVCKKHNI 125
zf-H2C2_2 pfam13465
Zinc-finger double domain;
161-186 5.94e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.94e-04
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 161 HLRRHERIHTGEKPYLCTHCGESFRY 186
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
619-644 1.20e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.20e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 619 NLTEHFRIHTGEKPYTCSLCGKSFTH 644
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
133-158 2.05e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 2.05e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 133 NLKRHRIIHAGEKPHKCSYCEKSFNQ 158
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
257-674 1.27e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 64.33  E-value: 1.27e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 257 KNHVCLECGKSFIRAEQLKNHRRIHTGEKPYKCSY--CEKSFSWSSNLKLHERVHTGEKPYYCPACQKSFRSSQNLLNHT 334
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 335 RKCHtiteikmefveeeIDDLGDSETSRIYKQEETEEQTDPkEVKQENLELNEDEDFLHGEPeNNSQTTDTKNSFSCPHC 414
Cdd:COG5048   112 SSSS-------------NSNDNNLLSSHSLPPSSRDPQLPD-LLSISNLRNNPLPGNNSSSV-NTPQSNSLHPPLPANSL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 415 DRSFTLEASLISHSSIHSRERPYTCPQCPKSFARKDSLRMHLRLHTGEKPYACPQCAKAF------AQKEHLTIHIRIHT 488
Cdd:COG5048   177 SKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllsQSPSSLSSSDSSSS 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 489 GEKPFVCDQCGSSFARSDSLKNHSRIHTG-VKPYSCPHCAKRFTWLHNFRKHIRLHS----GVKPYSC--EDCGKKFPSA 561
Cdd:COG5048   257 ASESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSVNhsgeSLKPFSCpySLCGKLFSRN 336

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 562 SVLKYHMQSHSEERPHSC--STCGKSFIQLDAFKMHQKLH-----SGVRPFVCSH--CGKSFNKASNLTEHFRIHTGEKP 632
Cdd:COG5048   337 DALKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLSnsCIRNFKRDSNLSLHIITHLSFRP 416

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1207117801 633 --YTCSLCGKSFTHSATLKAHERIHTGEKPHHCTQCGKSFGRAS 674
Cdd:COG5048   417 ynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
145-590 1.79e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 63.56  E-value: 1.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 145 KPHKCSYCEKSFNQSVHLRRHERIHTGEKPYLCTHCGESFRYRTDLNK--HLRVHTGETPFTCEQCGNNFRSSA-NLKLH 221
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELsrHLRTHHNNPSDLNSKSLPLSNSKAsSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 222 MTIHTNEKPYACPLCQRRFSRLNACQRHQKIHVEEKNHVCLECGKSFIRAEQLKNHRRIHTGEKPYKCSYCEKSFSwssn 301
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLL---- 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 302 lkLHERVHTGEKPYYCPACQKSFRSSQNLLNHTRKCHTITEIKmefveeeIDDLGDSETSRIYKQEETEE-QTDPKEVKQ 380
Cdd:COG5048   188 --ISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLP-------LTTNSQLSPKSLLSQSPSSLsSSDSSSSAS 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 381 ENLELNEDEDFLHGEPENNSQTTDTKNSFScphcdrsftleaslishssihsrerPYTCPQCPKSFARKDSLRMHLR--L 458
Cdd:COG5048   259 ESPRSSLPTASSQSSSPNESDSSSEKGFSL-------------------------PIKSKQCNISFSRSSPLTRHLRsvN 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 459 HTGE--KPYACP--QCAKAFAQKEHLTIHIRIHTGEKPFVCDQCGSSFARSDSLKN-------HSRIHTGVKPYSCPH-- 525
Cdd:COG5048   314 HSGEslKPFSCPysLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNeppqslqQYKDLKNDKKSETLSns 393

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1207117801 526 CAKRFTWLHNFRKHIRLHSGVKPYSCED--CGKKFPSASVLKYHMQSHSEERPHSCSTCGKSFIQLD 590
Cdd:COG5048   394 CIRNFKRDSNLSLHIITHLSFRPYNCKNppCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
62-476 1.45e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 54.32  E-value: 1.45e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801  62 LHSCPQCGKSFTSKENLNMHMNIHSGENLYICTECGKSFSQLDSYNLHQ---KTHNEARDHVCLECGKSFSTADNLKRHR 138
Cdd:COG5048    33 PDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRhlrTHHNNPSDLNSKSLPLSNSKASSSSLSS 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 139 IIHAGEKPHKCSYCEKSFNQSVHLRRHERIHTGEKPYLCTHCGESFR----------------------YRTDLNKHLRV 196
Cdd:COG5048   113 SSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVntpqsnslhpplpanslskdpsSNLSLLISSNV 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 197 HTGETPFTCEQCGNNFRSSANLKLHMTIHTNEKPYACPLCQRRFSRLNACQRHQKIHVEEKNHVCLECGKSFIRAEQLKN 276
Cdd:COG5048   193 STSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASSQS 272

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 277 HRRIHTGE-------KPYKCSYCEKSFSWSSNLKLHER--VHTGE--KPYYCPA--CQKSFRSSQNLLNHTRKCHTITEI 343
Cdd:COG5048   273 SSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 344 KMEFVEEEIDDLGDSetsriykqeeteeqtDPKEVKQENLELNEDEDFLHGEPENNSQTTDTKNSFSCPHCDRSFTLeas 423
Cdd:COG5048   353 KEKLLNSSSKFSPLL---------------NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSF--- 414

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1207117801 424 lishssihsRERPYTCPQCPKSFARKDSLRMHLRLHTgEKPYACPQCAKAFAQ 476
Cdd:COG5048   415 ---------RPYNCKNPPCSKSFNRHYNLIPHKKIHT-NHAPLLCSILKSFRR 457
PHA00733 PHA00733
hypothetical protein
 286-340 5.05e-04

hypothetical protein


Pssm-ID: 177301  Cd Length: 128  Bit Score: 40.63  E-value: 5.05e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1207117801 286 PYKCSYCEKSFSWSSNLKLHERVHTGEKpyYCPACQKSFRSSQNLLNHTRKCHTI 340
Cdd:PHA00733   73 PYVCPLCLMPFSSSVSLKQHIRYTEHSK--VCPVCGKEFRNTDSTLDHVCKKHNI 125
zf-H2C2_2 pfam13465
Zinc-finger double domain;
161-186 5.94e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.94e-04
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 161 HLRRHERIHTGEKPYLCTHCGESFRY 186
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 489-572 8.67e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 42.40  E-value: 8.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 489 GEKPFVCD--QCGSSFARSDSLKNHsRIHTgvkpyscpHCAKRFTWLHNFRKHIRLHSGVKPYSCEDCGKKFPSASVLKY 566
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYH-MLHG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*.
gi 1207117801 567 HmQSHS 572
Cdd:COG5189   417 H-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
619-644 1.20e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.20e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 619 NLTEHFRIHTGEKPYTCSLCGKSFTH 644
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
274-297 1.28e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.28e-03
                          10        20
                  ....*....|....*....|....
gi 1207117801 274 LKNHRRIHTGEKPYKCSYCEKSFS 297
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
133-158 2.05e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 2.05e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 133 NLKRHRIIHAGEKPHKCSYCEKSFNQ 158
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
451-476 2.17e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.17e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 451 SLRMHLRLHTGEKPYACPQCAKAFAQ 476
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
301-326 2.26e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.26e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 301 NLKLHERVHTGEKPYYCPACQKSFRS 326
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
648-670 2.30e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.30e-03
                          10        20
                  ....*....|....*....|...
gi 1207117801 648 LKAHERIHTGEKPHHCTQCGKSF 670
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
479-504 6.03e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 6.03e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207117801 479 HLTIHIRIHTGEKPFVCDQCGSSFAR 504
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
391-687 7.63e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.29  E-value: 7.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 391 FLHGEPENNSQTTDTKNSFSCPHCDRSFTLEASLISHSSIHSRERPYTC--PQCPKSFARKDSLRMHLRLHTGEKPYACP 468
Cdd:COG5048    16 LSSTPKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNS 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 469 -QCAKAFAQKEHLTIHIRIHTGEKPFVCDQCGSSFARSDSLKNHSRIHTGVKPYSCPHCAKRF------------TWLHN 535
Cdd:COG5048    96 kSLPLSNSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSvntpqsnslhppLPANS 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 536 FRK----------HIRLHSGVKPYSCEDCGKKFPSASVLKYHMQSHSEERPHSCSTCGKSFIQLDAFKMHQKLHSGVRPF 605
Cdd:COG5048   176 LSKdpssnlslliSSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSS 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207117801 606 VCSHCGKSFNKASNLTEHFRIHTGE-------KPYTCSLCGKSFTHSATLKAHER--IHTGE--KPHHCT--QCGKSFGR 672
Cdd:COG5048   256 SASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPysLCGKLFSR 335

                         330
                  ....*....|....*
gi 1207117801 673 ASHLLAHVKTHSSKR 687
Cdd:COG5048   336 NDALKRHILLHTSIS 350
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 545-600 8.68e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.93  E-value: 8.68e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1207117801 545 GVKPYSCE--DCGKKFPSASVLKYHM-QSH------------------SEERPHSCSTCGKSFIQLDAFKMHQKlHS 600
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHMlHGHqnqklhenpspekmnifsAKDKPYRCEVCDKRYKNLNGLKYHRK-HS 421
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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