NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|755527401|ref|XP_011246845|]
View 

uncharacterized protein C16orf95 homolog isoform X3 [Mus musculus]

Protein Classification

DUF4568 domain-containing protein( domain architecture ID 10633482)

DUF4568 domain-containing protein similar to Mus musculus C16orf95 homolog isoform 1

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
DUF4568 pfam15132
Domain of unknown function (DUF4568); This family of proteins is functionally uncharacterized. ...
10-186 4.53e-91

Domain of unknown function (DUF4568); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes.


:

Pssm-ID: 434485  Cd Length: 175  Bit Score: 263.75  E-value: 4.53e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527401   10 LRTVPQEYACCQCYTKFGGHLPVPRADALLPYWVPLSLRPRKQVSKMMRCYIPRAMKSCRCSCHCFGGRLPMPRDRAVMP 89
Cdd:pfam15132   1 AVTVEQECCCCQCRFKGRGPLPVPRAAAPLPYWVPLSLRPRKQKMKMTDIPIPTKACPCPCHCHGFGGRLPMPRDVAVMP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527401   90 YWVPQGLRSQKKVLKRLENVEDTPGRPQDSSRWYGCWRVCGNQHLLLKWQQLQALYQDElpGLQEDEPHAGRLGLLPISF 169
Cdd:pfam15132  81 YWVPQRLRKKKKVRKRSFKSIKESPLDSHSWHWYWRWRCCRHLHLLLKWQQLQALEQQE--ALERRVIPQPSFLLLPLSF 158
                         170
                  ....*....|....*..
gi 755527401  170 NLLSLLQAVLRAIIAIC 186
Cdd:pfam15132 159 LLLLLLQAVLRSFIAIF 175
 
Name Accession Description Interval E-value
DUF4568 pfam15132
Domain of unknown function (DUF4568); This family of proteins is functionally uncharacterized. ...
10-186 4.53e-91

Domain of unknown function (DUF4568); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes.


Pssm-ID: 434485  Cd Length: 175  Bit Score: 263.75  E-value: 4.53e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527401   10 LRTVPQEYACCQCYTKFGGHLPVPRADALLPYWVPLSLRPRKQVSKMMRCYIPRAMKSCRCSCHCFGGRLPMPRDRAVMP 89
Cdd:pfam15132   1 AVTVEQECCCCQCRFKGRGPLPVPRAAAPLPYWVPLSLRPRKQKMKMTDIPIPTKACPCPCHCHGFGGRLPMPRDVAVMP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527401   90 YWVPQGLRSQKKVLKRLENVEDTPGRPQDSSRWYGCWRVCGNQHLLLKWQQLQALYQDElpGLQEDEPHAGRLGLLPISF 169
Cdd:pfam15132  81 YWVPQRLRKKKKVRKRSFKSIKESPLDSHSWHWYWRWRCCRHLHLLLKWQQLQALEQQE--ALERRVIPQPSFLLLPLSF 158
                         170
                  ....*....|....*..
gi 755527401  170 NLLSLLQAVLRAIIAIC 186
Cdd:pfam15132 159 LLLLLLQAVLRSFIAIF 175
 
Name Accession Description Interval E-value
DUF4568 pfam15132
Domain of unknown function (DUF4568); This family of proteins is functionally uncharacterized. ...
10-186 4.53e-91

Domain of unknown function (DUF4568); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes.


Pssm-ID: 434485  Cd Length: 175  Bit Score: 263.75  E-value: 4.53e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527401   10 LRTVPQEYACCQCYTKFGGHLPVPRADALLPYWVPLSLRPRKQVSKMMRCYIPRAMKSCRCSCHCFGGRLPMPRDRAVMP 89
Cdd:pfam15132   1 AVTVEQECCCCQCRFKGRGPLPVPRAAAPLPYWVPLSLRPRKQKMKMTDIPIPTKACPCPCHCHGFGGRLPMPRDVAVMP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527401   90 YWVPQGLRSQKKVLKRLENVEDTPGRPQDSSRWYGCWRVCGNQHLLLKWQQLQALYQDElpGLQEDEPHAGRLGLLPISF 169
Cdd:pfam15132  81 YWVPQRLRKKKKVRKRSFKSIKESPLDSHSWHWYWRWRCCRHLHLLLKWQQLQALEQQE--ALERRVIPQPSFLLLPLSF 158
                         170
                  ....*....|....*..
gi 755527401  170 NLLSLLQAVLRAIIAIC 186
Cdd:pfam15132 159 LLLLLLQAVLRSFIAIF 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH