NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|70987619|gb|AAZ16660|]
View 

NADH dehydrogenase subunit 5 (mitochondrion) [Bos taurus]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475900)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1183.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    1 MNMFSSLSLVTLLLLTMPIMMMSFNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   81 KMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108  81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  161 RADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  481 TMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 70987619  561 ILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISMILF 602
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1183.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    1 MNMFSSLSLVTLLLLTMPIMMMSFNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   81 KMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108  81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  161 RADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  481 TMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 70987619  561 ILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISMILF 602
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
43-601 8.22e-148

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 439.97  E-value: 8.22e-148
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  43 AFITSMIPTMMFIHS--------GQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNI 114
Cdd:COG1009  31 GWLAALAPLAAFVLSlllfpavlGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 115 NKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLN 194
Cdd:COG1009 111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAG 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 195 TWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEN 269
Cdd:COG1009 191 TLNFSELLAAAPTILSSPLLTLIlllllLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 270 NKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHS 349
Cdd:COG1009 271 SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 350 LNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSF-TAIYSTRIIF 428
Cdd:COG1009 351 TG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFF 429
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 429 FALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNN----IPPTTIPQMTM----PYYLKTTALIVTILGFIL 500
Cdd:COG1009 430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELhlahGLLLNALPLLLSLLGIAL 509
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 501 AL------EISNMTKNLKYHYPSNAFKFstllgYFPTIMHRLAPYMNLSMSQksaSSLLDLIWLEAILPKTISLAQMKAS 574
Cdd:COG1009 510 GYllylkrPLPALAERLKPLYRLLANKW-----YFDELYDALFVKPVRALAR---FLWFDRYVIDGIVNGLARLTLFSGR 581
                       570       580
                ....*....|....*....|....*..
gi 70987619 575 TLVTNQKGLIKLYFLSFLITILISMIL 601
Cdd:COG1009 582 LLRRLQTGYLQFYALTILLGVVVLLLL 608
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
39-501 2.34e-131

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 397.81  E-value: 2.34e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    39 AISYAFITSMIPTMMFIHSGQELIISN--WHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINK 116
Cdd:TIGR01974  36 SVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   197 DLQQIFMLNPSDSN--MPLIGLAL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKY 272
Cdd:TIGR01974 196 NFQEVFALAPGAFFsaLTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   273 IQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLND 352
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   353 EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALL 432
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 70987619   433 GQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPP--TTIPQMT--------MPYYLKTTALIVTILGFILA 501
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-399 6.06e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 188.29  E-value: 6.06e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI-----FMLNPSD 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   209 SNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLTEN-NKYIQSITLCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   287 FTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 70987619   364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1183.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    1 MNMFSSLSLVTLLLLTMPIMMMSFNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   81 KMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108  81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  161 RADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  481 TMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|..
gi 70987619  561 ILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISMILF 602
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
18-604 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 951.20  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   18 PIMMMSFNTYKPSNYPL-YVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFV 96
Cdd:MTH00137  21 PLLTTLSPNPQKPNWALtHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYV 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   97 TWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNR 176
Cdd:MTH00137 101 TWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNR 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  177 IGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 255
Cdd:MTH00137 181 VGDIGLILAMAWMATNLNSWEIQQIFALSKDfDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  256 GIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFF 335
Cdd:MTH00137 261 GIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFF 340
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  336 KAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIA 415
Cdd:MTH00137 341 KAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIA 420
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  416 TSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTI 495
Cdd:MTH00137 421 TSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTI 500
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  496 LGFILALEISNMT-KNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAS 574
Cdd:MTH00137 501 LGLLIALELASLTnKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLI 580
                        570       580       590
                 ....*....|....*....|....*....|.
gi 70987619  575 TLVTN-QKGLIKLYFLSFLITILISMILFNF 604
Cdd:MTH00137 581 TTTSNiQQGMIKTYLTLFLLTLALATLLLLL 611
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
20-602 0e+00

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 897.99  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   20 MMMSFNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWS 99
Cdd:MTH00004  20 ILLPLLSKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWS 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  100 IMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGD 179
Cdd:MTH00004 100 ILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGD 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  180 IGFILAMAWFLTNLNTWDLQQIFMLNPSDSnMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFL 259
Cdd:MTH00004 180 IGLILSMAWLAMTLNTWEIQQLFSPTQTPT-LPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFL 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  260 LIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAML 339
Cdd:MTH00004 259 LIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAML 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  340 FMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFT 419
Cdd:MTH00004 339 FLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFT 418
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  420 AIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFI 499
Cdd:MTH00004 419 AAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGIL 498
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  500 LALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN 579
Cdd:MTH00004 499 LALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTT 578
                        570       580
                 ....*....|....*....|....
gi 70987619  580 -QKGLIKLYFLSFLITILISMILF 602
Cdd:MTH00004 579 lQKGLIKNYLTSFALTILLLLLLT 602
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
19-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 849.20  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   19 IMMMSFNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTW 98
Cdd:MTH00066  17 LLILPLLLPKSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTW 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   99 SIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIG 178
Cdd:MTH00066  97 SILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVG 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  179 DIGFILAMAWFLTNLNTWDLQQIFMLNPSDSnMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF 258
Cdd:MTH00066 177 DIGLILSMAWLAMNTNSWELQQIFLLNDNST-LPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIF 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  259 LLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAM 338
Cdd:MTH00066 256 LLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAM 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  339 LFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSF 418
Cdd:MTH00066 336 LFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSF 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  419 TAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGF 498
Cdd:MTH00066 416 TAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTFMKLAALLVTLLGL 495
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  499 ILALEISNMTKNLKyhYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVT 578
Cdd:MTH00066 496 LIALDLAKITSKTT--PKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTIT 573
                        570       580
                 ....*....|....*....|....*
gi 70987619  579 N-QKGLIKLYFLSFLITILISMILF 602
Cdd:MTH00066 574 NiQTGLIKTYLTLFLITLLLMLILL 598
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
1-604 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 697.86  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    1 MNMFSSLSLVTLLLLTMPIMMMSFNTYKpsnyplYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00211   2 NTIFNSGFLLILILLLLPLLLPLNNSKL------HIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   81 KMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00211  76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYG 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  161 RADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNpSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00211 156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILN-LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN 394
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00211 395 GSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIL 474
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  481 TMPYYLKTTALIVTILGFILALEISNMTknlKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00211 475 SLPFLLKLMPLLVTIVGLLLGLELVNLT---HKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEK 551
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|....*
gi 70987619  561 ILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILISMILFNF 604
Cdd:MTH00211 552 LGPKGLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILLLFLL 596
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
45-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 581.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   45 ITSMIPTMMFIHSG-QELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLL 123
Cdd:MTH00208  67 FLSLINLLIWILLGcPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFM 203
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  204 LNPSDS---NMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCL 280
Cdd:MTH00208 227 LNNSNSfliNILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIL 306
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  281 GAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMG 360
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  361 GLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTL 440
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  441 VNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTtiPQMTMPYYLKTTALIVTILGFILALEISNMTKNLkyHYPSNAF 520
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSN--PINSNFF 542
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  521 KFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAS-TLVTNQKGLIKLYFLSFLITILISM 599
Cdd:MTH00208 543 SFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSkSYQLTQTGYIKQYLLSSTLLFLLIL 622

                 ...
gi 70987619  600 ILF 602
Cdd:MTH00208 623 TLS 625
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
43-601 8.22e-148

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 439.97  E-value: 8.22e-148
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  43 AFITSMIPTMMFIHS--------GQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNI 114
Cdd:COG1009  31 GWLAALAPLAAFVLSlllfpavlGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 115 NKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLN 194
Cdd:COG1009 111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAG 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 195 TWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEN 269
Cdd:COG1009 191 TLNFSELLAAAPTILSSPLLTLIlllllLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 270 NKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHS 349
Cdd:COG1009 271 SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 350 LNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSF-TAIYSTRIIF 428
Cdd:COG1009 351 TG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFF 429
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 429 FALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNN----IPPTTIPQMTM----PYYLKTTALIVTILGFIL 500
Cdd:COG1009 430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELhlahGLLLNALPLLLSLLGIAL 509
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 501 AL------EISNMTKNLKYHYPSNAFKFstllgYFPTIMHRLAPYMNLSMSQksaSSLLDLIWLEAILPKTISLAQMKAS 574
Cdd:COG1009 510 GYllylkrPLPALAERLKPLYRLLANKW-----YFDELYDALFVKPVRALAR---FLWFDRYVIDGIVNGLARLTLFSGR 581
                       570       580
                ....*....|....*....|....*..
gi 70987619 575 TLVTNQKGLIKLYFLSFLITILISMIL 601
Cdd:COG1009 582 LLRRLQTGYLQFYALTILLGVVVLLLL 608
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
43-501 8.26e-139

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 417.64  E-value: 8.26e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   43 AFITSMIPTMMFIHSGQELI-ISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYL 121
Cdd:PRK06590  42 SALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYL 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI 201
Cdd:PRK06590 122 NLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEV 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  202 F-----MLNPSDSNMPLIGLAL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQ 274
Cdd:PRK06590 202 FaaapqFFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEAL 281
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  275 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQ 354
Cdd:PRK06590 282 LFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 361
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  355 DIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYtNAWALLMTLIATSFTAIYSTRIIFFALLGQ 434
Cdd:PRK06590 362 DIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGK 440
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  435 PR--------FPTLVNInennPLLInsikrLLIGSLFAGYIISNNI---------PPTTIPQMTMPYYLKTTALIVTILG 497
Cdd:PRK06590 441 EKekihhpheSPAVMTL----PLIV-----LAVLSVFAGALIVPPFlgvlpltteLAHGEAEHHLPVWVALLPLVVALAG 511

                 ....
gi 70987619  498 FILA 501
Cdd:PRK06590 512 IALA 515
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
39-501 2.34e-131

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 397.81  E-value: 2.34e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    39 AISYAFITSMIPTMMFIHSGQELIISN--WHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINK 116
Cdd:TIGR01974  36 SVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   197 DLQQIFMLNPSDSN--MPLIGLAL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKY 272
Cdd:TIGR01974 196 NFQEVFALAPGAFFsaLTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   273 IQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLND 352
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   353 EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALL 432
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 70987619   433 GQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPP--TTIPQMT--------MPYYLKTTALIVTILGFILA 501
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
66-597 1.15e-117

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 362.47  E-value: 1.15e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   66 WHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWE 145
Cdd:MTH00020  62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  146 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIF-MLNPSDSN---MPLIGLALAAT 221
Cdd:MTH00020 142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnMVVSAPSSditLICLFLFIGAV 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  222 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKI 301
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  302 IAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALT 381
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  382 GMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQP--RFPTLVNINENNPLLINSIKRLLI 459
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILAL 461
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  460 GSLFAGYIISNNI------PPTTIPQMT--MPYYLKTTALIVTILGF-----ILALEISNMTKNLkYHYPSNAFKFSTLL 526
Cdd:MTH00020 462 GSIFVGYLAKEMIwsfqitLPPIVPLSIklLPVFLSLGGIGLVIILYfysskTFRVPFSFIGRNS-YTFLGSAWQFNYIL 540
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 70987619  527 GYFptIMHRLAPymnlsMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILI 597
Cdd:MTH00020 541 NYF--LIKKIWK-----GGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSlQSGLVFNYALVILIGVAI 605
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
66-593 2.27e-116

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 359.32  E-value: 2.27e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   66 WHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWE 145
Cdd:MTH00210  62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  146 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFML---NPSDSNMPLIGLAL--AA 220
Cdd:MTH00210 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLlvtNINKESLTIICLLLfiGA 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  221 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKK 300
Cdd:MTH00210 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  301 IIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLAL 380
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  381 TGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFP--TLVNINENNPLLINSIKRLL 458
Cdd:MTH00210 382 MGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKkeVFIGVHESSWNITFPLLLLA 461
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  459 IGSLFAGYI-----ISNNIPPttipqmTMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGY----- 528
Cdd:MTH00210 462 FGSIFVGYLgkevvLSNVIPP------IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYtflns 535
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 70987619  529 ---FPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLI 593
Cdd:MTH00210 536 awqFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNlQSGMVFNYALIMII 604
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
44-603 2.86e-115

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 355.22  E-value: 2.86e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   44 FITSMIPTMMFIHSGQELIIsNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLL 123
Cdd:MTH00165  15 SLILFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILAMAWFLtNLNTWDLQQIFM 203
Cdd:MTH00165  94 FVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFGSWNFIFYLD 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  204 LNPSDSNMPLIGLA--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLtENNKYIQSITLCLG 281
Cdd:MTH00165 172 FMKNSFEMLLIGLLimLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL-LFSSFFSKFLLLIS 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  282 AITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGG 361
Cdd:MTH00165 251 LLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGG 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLV 441
Cdd:MTH00165 331 LSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLN 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  442 NINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIpQMTMPYYLKTTALIVTILGFILALEISNMT--KNLKYHYPSNA 519
Cdd:MTH00165 411 NLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPY-MICLPFYLKLLTLFVILLGGWLGYELSLMSlsYNLKSLKNYKL 489
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  520 FKFSTLLGYFPTIMHRLAPYMNLSMSQKSaSSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILIS 598
Cdd:MTH00165 490 SSFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFLLWMIIL 568

                 ....*
gi 70987619  599 MILFN 603
Cdd:MTH00165 569 LLLFL 573
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
42-604 7.43e-113

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 348.76  E-value: 7.43e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   42 YAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYL 121
Cdd:MTH00151  12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDiGFILAMAWFLTNLNTWDLQQI 201
Cdd:MTH00151  92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSILSM 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  202 FMLNPSDSNMPLIglALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLG 281
Cdd:MTH00151 170 WDFKLSGWLGLLL--VLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFIS 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  282 AITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGG 361
Cdd:MTH00151 248 LLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGS 327
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLV 441
Cdd:MTH00151 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLS 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  442 NINENNPLLINSIKRLLIGSLFAGYIISnNIPPTTIPQMTMPYYLKTTALIVTILGFILALeISNMTKNLKYHYPSNAFK 521
Cdd:MTH00151 408 SKSDEDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLSFF 485
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  522 FSTLLGYFPTIMHRLApYMNLSMSQKSASSlLDLIWLEAILPKtiSLAQMKASTLVTNQKGLIKLYFLSFLITILISMIL 601
Cdd:MTH00151 486 FSSMWFLSPLSSQPLK-SLSLKLSNSSMKS-LDMGWLEILGGQ--GVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFL 561

                 ...
gi 70987619  602 FNF 604
Cdd:MTH00151 562 VVI 564
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
21-603 3.51e-97

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 308.23  E-value: 3.51e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   21 MMSFNTYKPSNYPLYVktaisyAFITSMIPTMMFIHSGQELIISnWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSI 100
Cdd:MTH00207   1 LRMFKPSSIASYLLWF------MSILMFPLSLYLMMCNKTILIE-WEIFTISSSPINFTIILDPTGTLFSSTVLFISANV 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  101 MEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDI 180
Cdd:MTH00207  74 LLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDV 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  181 GFILAMAWFLtNLNTWDLqqIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLL 260
Cdd:MTH00207 153 MLLLSIGWTL-NQGHWSI--TNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  261 IRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLF 340
Cdd:MTH00207 230 IRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLF 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  341 MCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTA 420
Cdd:MTH00207 310 VCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTA 389
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  421 IYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIIsNNIPPTTIPQMTMPYYLKTTALIVTILGFIL 500
Cdd:MTH00207 390 AYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSAL-NWWLPTPQEEPILPLQYKLLPLLVVTLGALL 468
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  501 ALEI--SNMTKNLKYHYPSNAFKFSTLLGYFPTIMHR--LAPYMNLSmsqKSASSLLDLIWLEAILPKTISLAQMKASTL 576
Cdd:MTH00207 469 AWLFttPNITKTPLLINNPLSHFASCLMWFLVPLSSQfiMSTPMNLS---HNYLKLLDQGWLEMLGAQGTFKMFSRSSNN 545
                        570       580
                 ....*....|....*....|....*..
gi 70987619  577 VTNQKGLIKLYFLSFLITILISMILFN 603
Cdd:MTH00207 546 VMKLQKNIPNNYLMMSFVLLTIIIIMT 572
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
44-602 6.21e-97

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 307.34  E-value: 6.21e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   44 FITSMIPTMMFiHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLL 123
Cdd:MTH00209  13 FLFSFLMFVIF-MWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILAMAWFLtNLNTWDlqqIFM 203
Cdd:MTH00209  92 FILSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWML-MHGNWN---IFY 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  204 LNPSDSNMPLIGL--ALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLG 281
Cdd:MTH00209 167 LNFNSNLGSVISVliVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLG 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  282 AITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGG 361
Cdd:MTH00209 247 SLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGN 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLV 441
Cdd:MTH00209 327 LWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLN 406
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  442 NINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPqMTMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFk 521
Cdd:MTH00209 407 SSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNS-VVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNYF- 484
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  522 FSTLlgYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILISMI 600
Cdd:MTH00209 485 LSQM--WFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIiQNNSLKLFVTFMMLILLGVIL 562

                 ..
gi 70987619  601 LF 602
Cdd:MTH00209 563 FM 564
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
63-596 5.65e-92

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 297.25  E-value: 5.65e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   63 ISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFI 142
Cdd:MTH00032  59 IELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  143 GWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI------------------FML 204
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgyygggAYE 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  205 NPSDSNMPL-IGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAI 283
Cdd:MTH00032 219 SPLAPFAIIgILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL 298
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  284 TTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY-LAFLHICTHAFFKAMLFMCSGSIIHSLN-DEQDIRKMGG 361
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE------------------------------------AANTSYTN 405
Cdd:MTH00032 379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGS 458
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  406 AWALLMTLIATSFTAIYSTRIIFFALLGQPRFP------TLVNINENNPLLINSIkrLLIGSLFAGYIIsNNIPPTTIPQ 479
Cdd:MTH00032 459 AFAFWLGTVAALLTAFYSIRLVYITFIISPNSPkeslisSHINIVDKRVLTVLSL--LCFGAIFVGYLI-QDILIGDIEH 535
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  480 MTMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGY---------FPTIMHRLAPYMNLSMSQKSAS 550
Cdd:MTH00032 536 PIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIysflggawqGDHLINKLVAIPLFSFGHWGIY 615
                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|
gi 70987619  551 SLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLY---FLSFLITIL 596
Cdd:MTH00032 616 KTLDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYalvLLSFTIIFL 665
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
39-436 1.84e-89

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 290.77  E-value: 1.84e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   39 AISYAFITSMIptmmfihSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFF 118
Cdd:PRK07376  53 VLSYALLWSQI-------QGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFF 125
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  119 KYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDL 198
Cdd:PRK07376 126 AYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDF 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  199 QQIF--MLNPSDSNMPLIGLA--------LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTE 268
Cdd:PRK07376 206 DGIAdrLSELVSSGAVSGWLAlllcilvfLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFE 285
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  269 NNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIH 348
Cdd:PRK07376 286 QFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIH 365
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  349 SLND--------EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWalLMTLIATSFTA 420
Cdd:PRK07376 366 GMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTA 443
                        410
                 ....*....|....*.
gi 70987619  421 IYSTRIIFFALLGQPR 436
Cdd:PRK07376 444 FYMFRMYFLTFEGEFR 459
ndhF CHL00025
NADH dehydrogenase subunit 5
107-428 1.95e-70

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 241.72  E-value: 1.95e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  107 YMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGF---I 183
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgI 193
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  184 LAMAWFLTNLNTWDLQQIF--MLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
Cdd:CHL00025 194 LGFYWITGSFEFRDLFEIFnnLIYNNEVNLLFATLCafllfLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  257 IFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFK 336
Cdd:CHL00025 274 IFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSK 353
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  337 AMLFMCSGSIIHSL--------NDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIeaantsyTNAW- 407
Cdd:CHL00025 354 ALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-------NDSWl 426
                        330       340
                 ....*....|....*....|....*
gi 70987619  408 -ALLMTLIATS---FTAIYSTRIIF 428
Cdd:CHL00025 427 ySPIFAIIAWStagLTAFYMFRIYL 451
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
60-436 4.05e-65

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 230.08  E-value: 4.05e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   60 ELIISNWHWLtiQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQ 139
Cdd:PRK12648  54 EVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLIL 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  140 LFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGdiGFILaMAWFLTNLN---TWDLQQIF----MLNPSDSNMP 212
Cdd:PRK12648 132 LVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSYDLDVVLaagdLIRAHPLYPP 208
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  213 -LIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL---TENNKYIQSITlclGAITTLFT 288
Cdd:PRK12648 209 aLVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVlagTEEWFWIVGGA---GLITLLLG 285
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  289 AMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHslndE---QDIRKMGGL 362
Cdd:PRK12648 286 AYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGL 361
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 70987619  363 FKAMPFTTTALIVGSLALTGMPFLTGFYSKDLII-EAANTSYTNAWALLMTLIAT---SFTAIYSTRIIFFALLGQPR 436
Cdd:PRK12648 362 RRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIHDVFFGPPP 439
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
42-415 7.24e-64

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 224.03  E-value: 7.24e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   42 YAFITSMIPTMMFIH--------SGQELIISNWHWltIQTLKLSLSFKMDYFSMMFipvALFVT---WSIMEFSMWYMYS 110
Cdd:PRK12647  16 AGWLLALLPLALFLYflsfipeiAAGETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKG 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  111 DPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDI----GFILAm 186
Cdd:PRK12647  91 HPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLallaGLILL- 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  187 aWFLTNlnTWDLQQIFMLNPSDSNMPLIGLAL-----AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLI 261
Cdd:PRK12647 170 -GNVTG--TYSLSELLASGDVIREHPLYLAILllvlgGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLA 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  262 RFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAM 338
Cdd:PRK12647 247 RLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGA 326
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 70987619  339 LFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAanTSYTNAWALLMTLIA 415
Cdd:PRK12647 327 LFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
PRK12650 PRK12650
DUF4040 family protein;
65-436 6.14e-60

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 215.29  E-value: 6.14e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   65 NWHWLTIQTL-----KLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQ 139
Cdd:PRK12650  55 TWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  140 LFIGWEGVGIMSFLLIGwwYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIfMLNPSDSNMPL------ 213
Cdd:PRK12650 135 LFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI-LHSDVWAEKPGlttvva 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  214 IGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCAL 293
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAV 291
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  294 TQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTT 370
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTF 370
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  371 TALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAI----YSTRIIFFALLGQPR 436
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
76-430 3.08e-58

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 201.14  E-value: 3.08e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  76 LSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:COG0651  68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 156 GWwYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI-FMLNPSDSNMPLIGLALAATG---KSAQFGLHP 231
Cdd:COG0651 148 AL-GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHF 226
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 232 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPL---TENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:COG0651 227 WLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLlfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 308 SQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMP 384
Cdd:COG0651 306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLP 384
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*..
gi 70987619 385 FLTGFYSKDLIIEAANTSytNAWALLMTLIATSF-TAIYSTRIIFFA 430
Cdd:COG0651 385 PLSGFVSKWLLLQAALEA--GAWLLAAVLLLSSLlTLAYFVRIFGRA 429
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
32-430 3.99e-57

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 207.47  E-value: 3.99e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   32 YPLYVKTAISYAFITSMIPTMMfihSGQELiisNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSD 111
Cdd:PRK12644  28 YVLALVPAAAFVWVLAQWPAVL---AGGAP---TEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDD 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  112 -PNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDigfiLAMAWFL 190
Cdd:PRK12644 102 ePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGG----LAMLVGI 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  191 TNL----NTWDLQQIfMLNPSDSNMPLIGLAL---AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF 263
Cdd:PRK12644 178 IILgqaaGTYRLSEL-LADPPTGPAVSVAVVLilvGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARL 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  264 YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQP--YLAFLH-ICTHAFFKAMLF 340
Cdd:PRK12644 257 APGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaALAGLAmLLAHALFKAALF 336
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  341 MCSGSIIHSlNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA---ANTSYTNAWALLMTLIATS 417
Cdd:PRK12644 337 LVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAvlhDGALGPAGPVVLAGIVLGS 415
                        410
                 ....*....|....
gi 70987619  418 -FTAIYSTRIIFFA 430
Cdd:PRK12644 416 iLTVAYSLRFLWGA 429
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
74-436 1.06e-56

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 204.69  E-value: 1.06e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619    74 LKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFL 153
Cdd:TIGR00940  65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   154 LIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFG 228
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAmvlvlLGAFTKSAQFP 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSS 308
Cdd:TIGR00940 225 FHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTIS 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   309 QLGLMMVTIGINQPYL----------------AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMPFTTTA 372
Cdd:TIGR00940 305 QLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTL 383
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 70987619   373 LIVGSLALTGMPFLTGFYSKDLIIEAANTSY------TNAWALLMTLIAT---SFTAIYSTRIIFFALLGQPR 436
Cdd:TIGR00940 384 AMIASAAMAGVPPFNGFLSKEMFFAEAITAHlvnpfdTVTLGYLFPYVATvasVFTFVYSLRFIHGVFFGRPK 456
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-399 6.06e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 188.29  E-value: 6.06e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI-----FMLNPSD 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   209 SNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLTEN-NKYIQSITLCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   287 FTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 70987619   364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
54-435 3.77e-54

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 194.36  E-value: 3.77e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   54 FIHS--------GQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFL 125
Cdd:PRK07390  51 FVHSllalraiwNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFE 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFM-- 203
Cdd:PRK07390 131 AAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAwa 210
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  204 --LNPSDSNMPLIGLALAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLC 279
Cdd:PRK07390 211 atANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIV 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  280 LGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDeQDIRKM 359
Cdd:PRK07390 290 IGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTEL 368
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 70987619  360 GGLFKAMPFTTTALIVGSLALTGMPFLTGFYSkdlIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQP 435
Cdd:PRK07390 369 GGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNaLTAFNLTRVFRLVFLGKP 442
PRK12646 PRK12646
DUF4040 family protein;
71-445 6.39e-54

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 196.90  E-value: 6.39e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   71 IQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSD-PNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGI 149
Cdd:PRK12646  65 MKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSV 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  150 MSFLLIGWWYGRADANTAALQAILYNRIGD----IGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLAL-AATGKS 224
Cdd:PRK12646 145 SSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLlGAFTKS 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYP-LTENNKYIQSITLcLGAITTLFTAMCALTQNDIKKIIA 303
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPlLGLSNMYIYIVTF-VGLITMLFGSITALKQWDLKGILA 303
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  304 FSTSSQLGLMMVTIGINQPYL-----------------AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAM 366
Cdd:PRK12646 304 YSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLF 382
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  367 PFTTTALIVGSLALTGMPFLTGFYSKDLIIEA-ANTSYTNAWALLMT-------LIATSFTAIYSTRII---FFALLGQP 435
Cdd:PRK12646 383 PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVkevFWGKYDSK 462
                        410
                 ....*....|
gi 70987619  436 RFPTlVNINE 445
Cdd:PRK12646 463 VFTK-KNIHE 471
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
76-433 8.18e-52

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 186.28  E-value: 8.18e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00095  37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  156 gWWYGRADANTAALQAILYNRIGDIgFILAMAWFLTNLNTWDLQQIFMlnpsdSNMPLIGLALAATGKSAQFGLHPWLPS 235
Cdd:MTH00095 117 -LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFF-----SSSMILMLLLTSFTKSAQFPFSSWLPK 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  236 AMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIqSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMV 315
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVM-KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  316 TIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLI 395
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 70987619  396 IEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLG 433
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
115-436 2.90e-50

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 186.28  E-value: 2.90e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  115 NKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDI----GFIL--AMAw 188
Cdd:PRK12645 110 GNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFILlyIMT- 188
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  189 fltnlNTWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF 263
Cdd:PRK12645 189 -----GSFSIREMIANADEIQNSPLFIPAmililLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARF 263
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  264 YPL-TENNKYIQSITLcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-----------NQPYL-----AF 326
Cdd:PRK12645 264 TPIfAGSQVWFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIgaaslhyqgddSKIYAaaitaAI 342
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  327 LHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA------AN 400
Cdd:PRK12645 343 FHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateAN 421
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 70987619  401 TSYTNAWALLMTLIA---TSFTAIYSTRIIFFALLGQPR 436
Cdd:PRK12645 422 LFSLDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYK 460
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
113-423 3.21e-50

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 180.94  E-value: 3.21e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  113 NINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWwYGRADANTAALQAILYNRIGDIGFILAMAWFLTN 192
Cdd:PRK06525 111 GTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQ 189
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  193 LNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFY----PLTE 268
Cdd:PRK06525 190 TGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPH 269
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  269 NNKYIQSItlcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTI--GINQPYLAF----LHICTHAFFKAMLFMC 342
Cdd:PRK06525 270 VIGYVGAV---MAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLV 346
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  343 SGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIY 422
Cdd:PRK06525 347 AGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVA 425

                 .
gi 70987619  423 S 423
Cdd:PRK06525 426 S 426
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
76-504 6.90e-47

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 176.56  E-value: 6.90e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12649  72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  156 GWWYGRADANTAALQAILYNRIGDIgFILAMAWFLTNLN-TWDLQQIFMLNPSDSNMP--------LIGLALAATGKSAQ 226
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGL-FMFAGFLLLHVITgTYDIATILQDSELIENIKghplflitLILIFIGAAAKSAQ 230
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFST 306
Cdd:PRK12649 231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYST 310
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  307 SSQLGLMMVTIGI---NQPYLAF----LHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLA 379
Cdd:PRK12649 311 ISQLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALA 389
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  380 LTGMPFLTGFYSKDLIIEAA---NTSYTNAWALLMTLIATS---FTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINS 453
Cdd:PRK12649 390 MAGIPPLNGFLSKEMFYETSvemGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGERTHDHLPHHIHEAPYVMLI 469
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 70987619  454 IKRLLIG-----SLFAGYIISNNIPPTTIPQMTMPYYLK-------TTALIVTILGFILALEI 504
Cdd:PRK12649 470 PAAFLAGlvilfGLVPSIPIHNIIEPATSGIVLETAHLHvklwhgfTPALMMTIITFILGLLI 532
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
422-602 4.05e-46

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 160.79  E-value: 4.05e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   422 YSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTiPQMTMPYYLKTTALIVTILGFILA 501
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   502 LEISNMT-KNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSlLDLIWLEAILPKTISLAQMKASTLVTN- 579
Cdd:pfam06455  80 LELSNLSnKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ-IDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
                         170       180
                  ....*....|....*....|...
gi 70987619   580 QKGLIKLYFLSFLITILISMILF 602
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-435 9.77e-40

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 151.96  E-value: 9.77e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTWsimeFSMWYMY-SDPNINKFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK08375  69 IGIELRADSLSALFLLVTSILAI----AALLYAIgYGEHRQTRFYALFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  153 LLIGWwYGRADANTAALQAILYNRIGDIGFILAMA--WFLT-NLNTWDLQQIFMLNPS-DSNMPLIGLALAAtgKSAQFG 228
Cdd:PRK08375 144 ALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGllYGVTgTLNMADLAGALAENPTvVTAFGFVLLALAL--KAAVFP 220
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFY-----PLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIA 303
Cdd:PRK08375 221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  304 FSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLAL 380
Cdd:PRK08375 301 YSTVSQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSL 379
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 70987619  381 TGMPFLTGFYSKDLIIEAANtsYTNAWALLMTLIATSF-TAIYSTRIIFFALLGQP 435
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPP 433
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
83-436 6.67e-39

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 150.12  E-value: 6.67e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   83 DYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRA 162
Cdd:PRK12667  81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  163 DANTAALQAILYNRIGDIGFILAMAwFLTN----LNTWDLQQIFMLNPSDSNMPLIG-----LALAA-------TGKSAQ 226
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALA-FLYAtfgtLNMADLSAKIRGLSFPLTGGLAGnpplaLGVALalalwafTIKAAI 239
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  227 FGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFY--------PLTENNKYIQSITLCLGAITTLFTAMCALTQND 297
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  298 IKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALI 374
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFL 397
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 70987619  375 VGSLALTGMPFLTGFYSKDLIIEAAnTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPR 436
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPK 458
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
98-381 1.94e-34

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 137.14  E-value: 1.94e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   98 WSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRI 177
Cdd:PRK08168  83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  178 GDIGFILAMAWFLTNLNTWDLQQI-FMLNPSDSNMPLIG----LALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 252
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALwAHLAAQGASPSLQAaallLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  253 VVAGiFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTH 332
Cdd:PRK08168 243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 70987619  333 AFFKAMLFMCSGSII-----HSLNDEQDIRKMGGLFKAmPFTTTALIVGSLALT 381
Cdd:PRK08168 322 SLYKAHAFLSASEAVrdtrlRRLQGPQSAAGVVSLLLA-PLLSAALVLLLQSLL 374
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
71-436 4.40e-34

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 135.59  E-value: 4.40e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  71 IQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPninKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGI 149
Cdd:COG1008  69 IPSLGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRP---KLYYALLLLLEAGMIGVfLALDLFLFYVFWELMLI 145
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 150 MSFLLIGWWyGRADANTAALQAILYNRIGDIGFILAMAW--FLTNLNTWDLQQIFMLN-PSDSNMPLIGLALAATG-KSA 225
Cdd:COG1008 146 PMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILAlyFLAGALTFDIAELAAAPlPLTAQLLLFLAFFIAFAvKVP 224
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 226 QFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF-YPLT-ENNKYIQSITLCLGAITTLFTAMCALTQNDIKKII 302
Cdd:COG1008 225 MFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 303 AFSTSSQLGLMMV------TIGINQpylAFLHICTHAFFKAMLFMCSGSIIHSLNDeQDIRKMGGLFKAMPFTTTALIVG 376
Cdd:COG1008 304 AYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLA 379
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 377 SLALTGMPFLTGFYSKDLIIEAANTSYTnAWALLMTLiATSFTAIYSTRIIFFALLGQPR 436
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQVNP-WLAILAAL-GLILTAAYLLWMYQRVFFGPLK 437
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
132-436 1.05e-33

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 135.79  E-value: 1.05e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  132 VTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNM 211
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  212 PLIGLALaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEnnkyiqsITLCLGAITTLFTAMC 291
Cdd:PRK12668 189 ILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFF 257
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  292 ALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPF 368
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPL 336
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 70987619  369 TTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYtNAWALLMTLIATSFTAIYST-RIIFFALLGQPR 436
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMIISAAGEDH-YVWVWLLLLLASAGTFLHFGiKLPYFAFFGGDS 404
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-435 2.80e-32

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 130.99  E-value: 2.80e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   80 FKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08376  86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  160 GRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI-FMLNPSDSNMPLIGLALAATG---KSAQFGLHPWLPS 235
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFIAGlamKSGAVPVHMWLPD 245
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  236 AM-EGPTPVSALLHSSTmvVAGIFLLIR----FYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQL 310
Cdd:PRK08376 246 AYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  311 GLMMVTIGINQPYL---------------AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIV 375
Cdd:PRK08376 324 GYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLI 402
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  376 GSLALTGMPFLTGFYSKDLIIEAanTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQP 435
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-468 9.47e-30

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 123.00  E-value: 9.47e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYM---YSDPNINKFFKYLLLFLITMLILVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK06589  75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLainNIDSSSRFLFFFNLTILIGVLIALSSD-LFTMFVCYELLTISTA 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  153 LLIGWwygradANTAALQAILYNRIGdIGFILAMAWFL-------TNLNTWDLQQIFMLNPSDSNMPLIGLaLAATGKSA 225
Cdd:PRK06589 154 FLIGH------TRNNISLSGGYKYLK-ILMISALLLFLpaviliyTKTGNLDFVSGGLFSKNQSIILLLMF-IYGIAKTA 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSIT-----LCLGAITTLFTA-MCALTQNDIK 299
Cdd:PRK06589 226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIK 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  300 KIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIhSLNDEQDIRKMGGLFKAMPFTTTALIVG 376
Cdd:PRK06589 306 KILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISIS 384
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  377 SLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTL---IATSFTAIYSTRIIFFALlgQPRFPTLVNINENNPLLINS 453
Cdd:PRK06589 385 SLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviASSILSALYLLKILSSIY--KPSLSENSFITKSLPYLMQI 462
                        410
                 ....*....|....*
gi 70987619  454 IKRLLIGSLFAGYII 468
Cdd:PRK06589 463 SVITCCCALTLFYFI 477
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
117-475 2.63e-29

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 121.21  E-value: 2.63e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGwwYGRAD-ANTAALQAILYNRIGDIGFILAMAWFLTNLNT 195
Cdd:PRK07234  96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  196 WDLQQIfmlnpsdSNMPLIGLALAATG---KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKY 272
Cdd:PRK07234 174 FAFSGL-------ATADPEAFALIALGllvKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL 246
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  273 IQSItlcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqpylAFLHIcTHAFFKAMLFMCSGsIIHSLND 352
Cdd:PRK07234 247 IVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNF 317
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  353 EQDIRKMGGLFKAMPftttaLIVGSLALTGMPFLTGFYSKDLIIEAANTsytnaWALLMTLIATSFTAIYSTRIIFFALL 432
Cdd:PRK07234 318 TELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNLLP-----WQAIALNLAAVGTAASFWKFIFLPFS 387
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 70987619  433 GQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPT 475
Cdd:PRK07234 388 ADDEDKKPLPGFWNAIALLLGGLFLANGVYTEAYTLGNILKAL 430
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
123-436 4.67e-29

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 122.30  E-value: 4.67e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIF 202
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  203 MLNPSdsnmPLIG-----LALAATG-KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FYPLTENNKYI 273
Cdd:PRK06521 201 AAHLS----PFWAslvflLALFGFGaKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWW 275
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  274 QSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-------NQPYLAFL-------HICTHAFFKAML 339
Cdd:PRK06521 276 GVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLL 355
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  340 FMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYTNAWALLMT------ 412
Cdd:PRK06521 356 FLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLlSSPGLPQWGLKLAvpiaaa 434
                        330       340       350
                 ....*....|....*....|....*....|.
gi 70987619  413 -------LIATSFTAIYStrIIFfalLGQPR 436
Cdd:PRK06521 435 mlaltaaLAAMCFVKFYG--ITF---LGRPR 460
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
55-414 9.06e-28

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 118.29  E-value: 9.06e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   55 IHSGQELIISNWHWLTiqtlKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWY---MYSDPNINKFFKYLLLFLITMLIL 131
Cdd:PRK08667  52 LFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGV 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  132 VTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIgFILAMAWFLTNLN-TWDLQQIFMLNPSDSn 210
Cdd:PRK08667 128 VASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTV-FLMLGIIVLFIQTgSFELSPLGASAGILS- 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  211 MPLIGLALAATGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFY-PLTENNKYIQSITLCLGAITTLFT 288
Cdd:PRK08667 206 LVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLmDVLSPELWWGVLILLAGSISALLG 284
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  289 AMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHSLNDeQ 354
Cdd:PRK08667 285 VIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-R 363
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  355 DIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLI 414
Cdd:PRK08667 364 NIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILL 423
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
80-428 4.47e-27

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 115.03  E-value: 4.47e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   80 FKMDYFSMMFIPVALFVTWSIMEFSMWYM--------YSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMS 151
Cdd:PRK06458  65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevehgeLSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  152 FLLIGWwYGRADANTAALQAILynrIGDIGfiLAMAWFLTNLNTWDLQQI------------FMLNPSDSNMPLIGLA-- 217
Cdd:PRK06458 145 ALLVGI-YRTRASLEAAWKYII---ICSVG--VAFALFGTILVYANAATVmgdgemailwteLLKHASLLDPTLMKLAfv 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  218 LAATG---KSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFYPLTE---NNKYIQSITLCLGAITTLFTAM 290
Cdd:PRK06458 219 FLLIGfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAF 297
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  291 CALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLnDEQDIRKMGGLFKAMP 367
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSP 376
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 70987619  368 FTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYTNAWALLMTLIATSFTAIYS--TRIIF 428
Cdd:PRK06458 377 LTGWGLMLGALAIAGMPPFGVFISEFLILTAGlARGPLLIAILLLLLLTLAFAALVRrvAGMVF 440
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
85-427 9.53e-27

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 114.09  E-value: 9.53e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   85 FSMMFIPVALFVTWSIMEFSMWYMYSDPNInkffKYLLLFLITMLI---LVTANNLFQLFIGWEGVGIMSFLLIGWwYGR 161
Cdd:PRK08377  79 FAALFVLIIAIVSFIMSIFSLKAVEVEPID----KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY-NKT 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  162 ADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFML-NPSDSNMPLIGLALAATG---KSAQFGLHPWLPSAM 237
Cdd:PRK08377 154 GEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLaGTIDPTVAQVGLALLIFGlavEAELFPLNAWAPDAY 233
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  238 EG-PTPVSALLhSSTMVVAGIFLLIRFYPLTENNKYIQSIT---LCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLM 313
Cdd:PRK08377 234 QAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLklvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMI 312
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  314 MVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFY 390
Cdd:PRK08377 313 ALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFW 391
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 70987619  391 SKDLIIEAA-NTSYTnaWALLMTLIATSFTAIYSTRII 427
Cdd:PRK08377 392 SKFRIILAGlSAGYT--WPVALVLGASVVEAVYYFRLI 427
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
69-399 4.30e-26

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 113.17  E-value: 4.30e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   69 LTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSM-WYMYSDPNINKFfkyLLLFLITMLILVTANNLFQLFIGWEGV 147
Cdd:PRK08668  54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIM 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  148 GIMSFLLIgwWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI--FMLNPSDSNMPLIG---LALAATG 222
Cdd:PRK08668 131 TFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIsqGLINDTSTGFALIVflfLLAFGVA 208
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  223 KSAQFGLHPWLPSAM-EGPTPVSALLHS--STMVVAGIFLLIRFYPLTE---------NNKYIQSITLCLGAITTLFTAM 290
Cdd:PRK08668 209 KAGIFPLHVWAPDAYsEAPQSFSAVLSGqlSKLGAYGFLLVLYVLPGTKlfsefgtyrGVPLFNYILAWLGNISIIVGTL 288
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  291 CALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMP 367
Cdd:PRK08668 289 MAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfaGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMP 367
                        330       340       350
                 ....*....|....*....|....*....|..
gi 70987619  368 FTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:PRK08668 368 FTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
118-429 1.67e-23

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 104.58  E-value: 1.67e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIG--FILAMAWFLTNLNT 195
Cdd:MTH00063  79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVClfLLIGLSCWGGSGSF 157
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  196 WDLQQIFmlnpsdsnmpLIGLAlaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIqS 275
Cdd:MTH00063 158 LCCLFFF----------LIVFT-----KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLS-I 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  276 ITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQD 355
Cdd:MTH00063 222 FFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQS 301
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 70987619  356 IR-----KMGGLFkaMPFTTTALIVGslaLTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFF 429
Cdd:MTH00063 302 SNcvyssILYGSW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLI 375
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
71-423 6.26e-23

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 102.59  E-value: 6.26e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   71 IQTLKLSLSFKMDYFSMMFI-------PVALFVTWSIMEfsmwymysdpNINKFFKYLLLFLITMLILV-TANNLFQLFI 142
Cdd:PRK05846  69 IPRFGISYHLGVDGISLLLVvltalltPLAVLASWEEIK----------KRVKFYMAALLWLEGGVIGVfAALDLLLFYV 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  143 GWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGDIGF---ILAMAWFLTN-LNTWDLQQIFMLNPSDSNMPLIGLA- 217
Cdd:PRK05846 139 FFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMlvaIIYLVVVYYNaTGTFDIADLLNLPLPPGVQYWLFLAf 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  218 LAATG-KSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRF-YPLTEN-NKYIQSITLCLGAITTLF 287
Cdd:PRK05846 218 FIAFAvKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLRFsLPLFPDaSHEFAPIIITLGVIAIIY 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  288 TAMCALTQNDIKKIIAFSTSSQLGLmmVTIGI---NQPYL--AFLHICTHAFFKAMLFMCSGSIIHSLNDEqDIRKMGGL 362
Cdd:PRK05846 291 GALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGL 367
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 70987619  363 FKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTnawalLMTLIATS---FTAIYS 423
Cdd:PRK05846 368 AKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP-----VIAFIATTgliLAAVYS 426
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
78-465 2.90e-22

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 100.41  E-value: 2.90e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   78 LSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNiNKFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12663  71 IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGR-RYGFPPFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASFVLI 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  156 GWWyGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFM-LNPSDSNMPLIGLA----LAATGKSAQFGLH 230
Cdd:PRK12663 149 TLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrLNDMGDTATLTTIAllflLAFGMKAALFPFM 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  231 pWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL--TENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSS 308
Cdd:PRK12663 228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLlfPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  309 QLGLMMVTIGINQP--------YLAFLHIcthafFKAMLFMCSGSIIHsLNDEQDIRKMGGLFKAMPFTTTALIVGSLAL 380
Cdd:PRK12663 307 SIGFILLGLALGTPagingaifYLVHDMV-----VKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAI 380
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  381 TGMPFLTGFYSKDLIIEAANTSytNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIG 460
Cdd:PRK12663 381 GGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVV 458

                 ....*
gi 70987619  461 SLFAG 465
Cdd:PRK12663 459 VIAMG 463
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
79-399 6.04e-21

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 95.95  E-value: 6.04e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  79 SFKMDYFSMMFIPVALFVTWSIMEFSMWYMySDPNINKFFKYLLLFLIT--MLILVTANNLFQLFIGWEGVGIMSFLLIG 156
Cdd:COG1007  65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVA 143
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 157 WWYGRADANTAALQAILYNRIGDIGFILAMAWFL-----TNLNtwDLQQIFMLNPSDSNMPLIGLALAATG---KSAQFG 228
Cdd:COG1007 144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYgatgsLNLA--GIAAALAAGGANSPLLLLGLVLVLAGlafKLSAVP 221
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 229 LHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF--YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFS 305
Cdd:COG1007 222 FHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619 306 TSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTG 382
Cdd:COG1007 301 SIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAG 380
                       330
                ....*....|....*..
gi 70987619 383 MPFLTGFYSKDLIIEAA 399
Cdd:COG1007 381 IPPTAGFFGKFYVFSAA 397
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
62-391 4.31e-20

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 93.94  E-value: 4.31e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   62 IISNWHWLTiqTLKLSLSFKMDYFSMMFIPVALFVTwSIMEFSMWYMYSDPninKFFKYLLLFLITMLILV-TANNLFQL 140
Cdd:PRK12561  39 LVERYAWLP--QIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVfLAQDLLLF 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  141 FIGWEGVGIMSFLLIGWWYGRaDANTAALQAILYNRIGDIgFIL----AMAWFLTNLnTWDLQQIFMLNPSDSNMPLI-- 214
Cdd:PRK12561 113 FLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILvaglALALSGDTF-TFDLAELGAKSYPLALELLLya 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  215 GLALAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRF--YPLTENNKYIQSITLCLGAITT 285
Cdd:PRK12561 190 GFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnvQMLPDAHVYFAPALAILGVVNI 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  286 LFTAMCALTQNDIKKIIAFSTSSQLGLMMVTI------GINQpylAFLHICTHAFFKAMLFMCSGSI---IHSLNdeqdI 356
Cdd:PRK12561 263 IYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS----I 335
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 70987619  357 RKMGGLFKAMP-----FTTTALivGSLALTGMpflTGFYS 391
Cdd:PRK12561 336 PNMGGLAKVMPktfalFTASSM--ASLALPGM---SGFVS 370
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
114-427 1.18e-19

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 92.49  E-value: 1.18e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  114 INKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRAdANTAALQAILYNRIG------DIGFILAMA 187
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  188 wflTNLNTWDLQQIFMLNPsDSNMPLIGLALAATG---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR- 262
Cdd:PRK12662 188 ---GTLNMGDMFLIIQDLP-TNRAIQIGVLFIMVGlfiKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRi 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  263 FYPLTENNKYI-----QSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAF 334
Cdd:PRK12662 263 VYDVFKANFVFttlpfNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSI 342
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  335 FKAMLFMCSGSIIHSLnDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSytNAWALLMTLI 414
Cdd:PRK12662 343 VKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLL 419
                        330
                 ....*....|....
gi 70987619  415 ATSFTA-IYSTRII 427
Cdd:PRK12662 420 VGSGLSvIYVWKIV 433
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
71-399 1.44e-18

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 88.85  E-value: 1.44e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   71 IQTLKL-------SLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINkFFKYLLLFLITMLI-LVTANNLFQLFI 142
Cdd:PRK07691  57 IQTLELgnwkapfGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERY-YYYPSVLFMLAGVNgAFLTGDIFNLFV 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  143 GWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGDIGFILAMAWFLT---NLNTWDL-QQIFMLNPSDSNM----PLI 214
Cdd:PRK07691 136 FFEVMLMASYVLIVIG-GTKIQLRESIKYVLINVVSSAFFVVAVAILYSvvgTLNMADIsVKIAELSAGQTGLitvvAIL 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  215 GLALAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL--TENNKYIQSITLCLGAITTLFTAMCA 292
Cdd:PRK07691 215 FLFVFAT-KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLffSHDTSFTHYLILILALLTIIFGVIGA 293
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  293 LTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHsLNDEQDIRKMGGLFKAMPFT 369
Cdd:PRK07691 294 VAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVL 372
                        330       340       350
                 ....*....|....*....|....*....|
gi 70987619  370 TTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:PRK07691 373 GWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
84-347 2.44e-17

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 85.09  E-value: 2.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   84 YFSMMFIpvaLFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRAD 163
Cdd:PRK08601  75 WLMAFFV---LTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKV 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  164 ANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFmlnpSDSNMPLIG----------LALAATGKSAQFGLHPWL 233
Cdd:PRK08601 152 AREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVL----SNENLAQLGtwektginllLILAVMIPAAQWPFQRWL 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  234 PSAMEGPTPVSALLHSStMVVAGIFLLIRFYPLTeNNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLM 313
Cdd:PRK08601 228 IESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFM 305
                        250       260       270
                 ....*....|....*....|....*....|....
gi 70987619  314 MVTIGINQPYLAFLHICTHAFFKAMLFMCSGSII 347
Cdd:PRK08601 306 LVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
213-422 7.32e-17

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 83.65  E-value: 7.32e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  213 LIGLAlaatGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLTENNK---YIQSITLCLGAITTLFT 288
Cdd:PRK08676 213 FIGFL----AKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGIFSIAVA 287
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  289 AMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLFKA 365
Cdd:PRK08676 288 AFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRL 366
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 70987619  366 MPFTTTALIVGSLALTGMPFLTGFYSK-DLIIEAANTS-YTNAWALLMTLIATSFTAIY 422
Cdd:PRK08676 367 QPVAAWGVILGSAAIIGMPPFPLFLSKfFILLQLGGISvWLVLAVLLLLLLAASSFAIF 425
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
103-442 4.51e-15

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 77.94  E-value: 4.51e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  103 FSMWYMYSDPNINKFFKYLLLFLIT---MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQailYNRIGD 179
Cdd:PRK05777  88 LALLLARPYLEDRGRGEFYLLVLFAllgMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIK---YFVLGA 164
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  180 I--GFIL---AMAWFLT-NLNTWDLQQIFMLNPSDSNMPLIGLALAATG---KSAQFGLHPWLPSAMEG-PTPVSALLHS 249
Cdd:PRK05777 165 LasGFLLygmSLLYGATgSLSFAGIAKALADGSGNSLLLLFGLVFLLVGlafKLSAVPFHMWTPDVYEGaPTPVTAFLAT 244
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  250 STMVVA-GIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMV--TIGINQPYLA- 325
Cdd:PRK05777 245 APKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglAAGTAEGYSAv 324
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  326 FLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTN 405
Cdd:PRK05777 325 LFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLW 404
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 70987619  406 AWALLMtLIATSFTAIYSTRIIFFALLGQPRFPTLVN 442
Cdd:PRK05777 405 WLAVIG-VLNSAIGAFYYLRVIKLMYFDEPPRDAPVN 440
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
71-422 7.45e-15

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 77.43  E-value: 7.45e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   71 IQTLKLSLSFKMDYFSMMFIPVALFVTWsIMEFSmwymySDPNIN--KFFKYLLLFLITMLI-LVTANNLFQLFIGWEGV 147
Cdd:PRK06473  66 IDSLGLSYHLGVDGLSLPLLVLNSLLTL-IAIYS-----SDESIQrpRFYYSLLLLLNAGVSgAFLAQDLLLFFLFYELE 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  148 GIMSFLLIGWWyGRADANTAALQAILYNRIGDI----GFiLAMAWfLTNLNTWDLQQIFMLN-PSDSNMPLIGLALAATG 222
Cdd:PRK06473 140 LIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF-LGLVW-LSGASSFDYEPLRSHTlPLSTQLLLLAPILVGFG 216
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  223 -KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF--YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDI 298
Cdd:PRK06473 217 iKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDM 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  299 KKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLF---KAMPFTTTA 372
Cdd:PRK06473 296 KKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSL 374
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 70987619  373 LIVGSLALTGMPFLTGFYSKDLIIEAANTSYtnAWALLMTLIATSFTAIY 422
Cdd:PRK06473 375 MILGVMASAGIPGMVGFIAEFLVFRGSFPIF--PVQTLLCMIGTGLTAVY 422
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
124-422 3.19e-14

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 75.39  E-value: 3.19e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  124 FLITMLILVT-------ANNLFQLFIGWEGVGIMSFLLI--GwwyGRADANTAALQAILYNRIGDIGFI--LAMAWFLT- 191
Cdd:PRK12665 113 FLPTYLILVAgvsnaflAGDLFNLYVGFEILLVASYVLLtlG---ATAARVRAGVTYVMVSMVSSLLFLigIALVYAATg 189
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  192 NLNTWDLQQIFMLNPSDSNMPLIGLALAATG-KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFYP 265
Cdd:PRK12665 190 TLNMADLAVRLDELPSGTRTALFAVLLVAFGiKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHT 264
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  266 LTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMC 342
Cdd:PRK12665 265 LLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLV 344
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  343 SGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA-ANTSYTNAWALLMTLIATSFTAI 421
Cdd:PRK12665 345 VG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTL 423

                 .
gi 70987619  422 Y 422
Cdd:PRK12665 424 Y 424
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
229-398 4.69e-14

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 75.25  E-value: 4.69e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNK-YIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPlWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  308 SQLGLMMVTIG-------INQPYLAFL-------HICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMPFTTTAL 373
Cdd:PRK08042 279 ENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAM 357
                        170       180
                 ....*....|....*....|....*
gi 70987619  374 IVGSLALTGMPFLTGFYSKDLIIEA 398
Cdd:PRK08042 358 LVGLMAMAALPPLNGFAGEWVIYQS 382
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
68-118 1.68e-12

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 62.06  E-value: 1.68e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 70987619    68 WLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFF 118
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
121-428 4.27e-12

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 68.52  E-value: 4.27e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  121 LLLFLITMLI-----LVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILAMAWFLT---N 192
Cdd:PRK06277 101 LYVFLMLMGLasvsaIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLAstgT 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  193 LNTWDLQQIFMLNPSdSNMPLIGLALAATGKSAQFGLHPW--LPSAM--EGPTPVSALLHSS---TMVVAGIFLLIRFYP 265
Cdd:PRK06277 180 LNITDIHNALLVNPT-SPVIYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTFskfVLVALMLVIFKLFGG 258
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  266 LTENNKyIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMC 342
Cdd:PRK06277 259 LSYFPS-AQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLG 337
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  343 SGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTL--IATSFTA 420
Cdd:PRK06277 338 AG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIvsIGTFVSM 416

                 ....*...
gi 70987619  421 IYSTRIIF 428
Cdd:PRK06277 417 MKAFYLIY 424
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
71-422 1.16e-11

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 67.43  E-value: 1.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   71 IQTLKLSLSFKMDYFSMMFIPVALFVTWsIMEFSMWYMYSDPNInkFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 150
Cdd:PRK07363  66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIP 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  151 SFLLIGWWYGRADAnTAALQAILYNRIGD---IGFILAMAWfLTNLNTWDLQQIFMLNPSdSNMPLIGLALAATG---KS 224
Cdd:PRK07363 143 FYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVW-LSGSTSFDYDAISTQNLS-LNTQLILLTGLLLGfgiKI 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF----YPLTENnkYIQSITLCLGAITTLFTAMCALTQNDIKK 300
Cdd:PRK07363 220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglqlFPQTWS--LVAPGLAIIGTISVIYGALSAIAQKDIKR 297
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  301 IIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLF---KAMPFTTTALI 374
Cdd:PRK07363 298 MVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLV 376
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 70987619  375 VGSLALTGMPFLTGFYSKDLIIEAANTSYtnAWALLMTLIATSFTAIY 422
Cdd:PRK07363 377 LAGMASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
58-423 7.94e-11

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 64.70  E-value: 7.94e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   58 GQELIISNWHWLTIQTLKL---SLSFKMDYFSMMF-------IPVALFVTWSIMEFsmwymysdpnINKFFKYLLLFLIT 127
Cdd:MTH00204  54 GQFQFINLIEWIISPTLNFqwgPLVFAVDGVSLFFillttllIPICILISWKSIKF----------LFKEFLLCLLFLEV 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  128 MLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFM--L 204
Cdd:MTH00204 124 LLIGVfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNikL 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  205 NPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF-YPL-TENNKYIQS 275
Cdd:MTH00204 204 PLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFLRFsWPLfPAASEYFAP 276
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  276 ITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLmmVTIGINQPYL-----AFLHICTHAFFKAMLFMCSgSIIHSL 350
Cdd:MTH00204 277 LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFLYER 353
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 70987619  351 NDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTsyTNAWALLMTLIATSFTAIYS 423
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFE--YSLGLGVLVTSGMVWSAAYS 424
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
124-396 6.30e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 61.86  E-value: 6.30e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  124 FLITMLIL-------VTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:MTH00226 133 FLICMLILefllyavFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTT 212
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  197 DLQQI----FMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFYP-LTENN 270
Cdd:MTH00226 213 DYLTLascsHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPiLPLGA 292
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  271 KYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVT------IGINQPYLAFLhicTHAFFKAMLFMCSg 344
Cdd:MTH00226 293 QNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV- 368
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 70987619  345 SIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLII 396
Cdd:MTH00226 369 TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI 420
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
74-421 6.76e-10

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 61.65  E-value: 6.76e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   74 LKLSLSFKMDYFSMMFIPVALFVTwSIMEFSMWYMYSDPninKFFKYLLLFLITMLILVTA-NNLFQLFIGWEGVGIMSF 152
Cdd:PRK02546  77 LGLTWSVGADGLSMPLILLTGFIT-TLAVLAAWPVTFKP---KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVY 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  153 LLIGWWYGRaDANTAALQAILYNRIGDIgFIL----AMAwFLTNLNTWDLQQIFMLN--PSDSNMPLIGLALAATGKSAQ 226
Cdd:PRK02546 153 LLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FYGDTPTFDMTALAAKDfgLGFQLLCYAGLLIAYGVKLPI 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  227 FGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRFYP--LTENNKYIQSITLCLGAITTLFTAMCALTQND 297
Cdd:PRK02546 230 VPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLLRMNAgmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRN 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  298 IKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSI---IHSLNDEQdirkMGGLFKAMP---- 367
Cdd:PRK02546 303 LKRKIAYSSISHMGFVLIGIGSFTDLGtsgAMLQMISHGLIGASLFFLVGATydrTHTLMLDE----MGGVGQKMRkmfa 378
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 70987619  368 -FTTTALivGSLALTGMpflTGFYSKDLIIEAANTSytNAWALLMTLIATSFTAI 421
Cdd:PRK02546 379 mWTACSL--ASLALPGM---SGFVAELMVFVGFATS--DAYTLPFRVVVVFLAAV 426
ndhB CHL00049
NADH dehydrogenase subunit 2
66-482 1.24e-09

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 60.79  E-value: 1.24e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   66 WHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMY-SDPNINKFFKYLLLFLITMLILVTANNLFQLFIGW 144
Cdd:CHL00049  61 FQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAL 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  145 EGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWfLTNLNTWDLQ------QIFMLNPSDSNMPLIGLAL 218
Cdd:CHL00049 141 ECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSW-LYGLSGGEIElqeivnGLINTQMYNSPGISIALIF 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  219 AATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FYPLTENNKYIQSITLCLgaiTTLFTA 289
Cdd:CHL00049 220 ITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAIL---SMILGN 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  290 MCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFkaMLFMCSGS----IIHSLNDEQD-IRKMGGLFK 364
Cdd:CHL00049 296 LIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYT 373
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  365 AMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSytNAWALLMTLIATSFTAIY-STRIIFFALLGQPRFPTLVNI 443
Cdd:CHL00049 374 KDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQA--GLYFLVSIGLLTSVISIYyYLKIIKLLMTGRNQEITPYVR 451
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 70987619  444 NENNPLLI--NSIKRLLI----GSLFAGYIISnniPPTTIPQMTM 482
Cdd:CHL00049 452 NYRRSPLRsnNSIELSMIvcviASTIPGISMN---PIIAIAQDTL 493
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
79-392 5.75e-09

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 58.91  E-value: 5.75e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   79 SFKMDYFSMMFIPVALFVTWSIMEFSMWYM-YSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:PRK02504  73 SFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGY 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  158 WYGRADANTAALQAILynrIGDIgfilAMAWFLtnlntWDLQQIFMLNPSDSNMPLIGLALAATG--------------- 222
Cdd:PRK02504 153 MKRDPRSNEAALKYLL---IGAA----SSAIFL-----YGSSLLYGLSGGSTQLSAIALALITSPslglalalvfviagi 220
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  223 --KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFypltennkyiqsITLCLGAITT----LFTAMC---- 291
Cdd:PRK02504 221 afKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTALAilsm 287
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  292 ------ALTQNDIKKIIAFSTSSQLGLMMV--TIGINQPYLAF-LHICTHAFFKAMLFMCSgsIIHSLNDEQD-IRKMGG 361
Cdd:PRK02504 288 vlgnvvALAQTSMKRMLAYSSIGQAGFVMIglVAGTEAGYASMvFYLLAYLFMNLGAFACV--ILFSLRTGTDqISDYAG 365
                        330       340       350
                 ....*....|....*....|....*....|.
gi 70987619  362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSK 392
Cdd:PRK02504 366 LYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
ndhD CHL00011
NADH dehydrogenase subunit 4
83-421 1.01e-08

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 58.03  E-value: 1.01e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   83 DYFSMMFIPVALFVTwSIMEFSMWYMYSDPninKFFKYLLLFLITMLI-LVTANNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:CHL00011  83 DGLSIGPILLTGFIT-TLATLAAWPVTRNS---RLFYFLMLAMYSGQIgLFSSRDLLLFFIMWELELIPVYLLLSMWGGK 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  162 ADAnTAALQAILYNRIGDIGF---ILAMAWFLTNLNTWDLQqifmlNPSDSNMPL-------IGLALAATGKSAQFGLHP 231
Cdd:CHL00011 159 KRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFE-----TLANQSYPValeilfyIGFLIAYAVKLPIIPLHT 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  232 WLPSamegpTPVSAllHSST-MVVAGIFL------LIRF-YPLTENNKYIQSITLCL-GAITTLFTAMCALTQNDIKKII 302
Cdd:CHL00011 233 WLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRInMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRI 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  303 AFSTSSQLGLMMVTIG-INQPYL--AFLHICTHAFFKAMLFMCSGSI---IHSLNDEQdirkMGGLFKAMP--FTT-TAL 373
Cdd:CHL00011 306 AYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPkiFTMfSSF 381
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 70987619  374 IVGSLALTGMpflTGFYSKDLIIEAANTSytNAWALLMTLIATSFTAI 421
Cdd:CHL00011 382 SMASLALPGM---SGFVAELIVFFGIITS--QKYLLMPKILITFVMAI 424
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
54-319 4.11e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 55.83  E-value: 4.11e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   54 FIHSGQELIISNWHWL-TIQTLKLSLSFKMDYFSMMF-------IPVALFVTWSIMEFSmwymysdpnINKFFKYLLLFL 125
Cdd:MTH00217  49 FDGEGQFQAIKKFEWIpGIEPVFGPVVFAVDGISIFFliltallTPICILISWNSIKFL---------IKEFLLCLLVIE 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQI--FM 203
Cdd:MTH00217 120 ILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALccLK 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  204 LNPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF-YPL-TENNKYIQ 274
Cdd:MTH00217 200 IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFsWPLlPEASEYFS 272
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 70987619  275 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLmmVTIGI 319
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLGI 315
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
75-317 4.70e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 55.55  E-value: 4.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   75 KLSLSFKMDYFSMMFIPVALFVTwSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFL 153
Cdd:MTH00163  47 NISYFFGLDLLSFGLILLSFWIC-MLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLF 125
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  154 LIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLaLAATGKSAQFGLHPWL 233
Cdd:MTH00163 126 LILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMI-LAFLVKMPMFFVHLWL 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  234 PSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLTEN-NKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFS 305
Cdd:MTH00163 205 PKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKlGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYS 277
                        250
                 ....*....|..
gi 70987619  306 TSSQLGLMMVTI 317
Cdd:MTH00163 278 SVAHMGLVLGGL 289
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
123-460 5.48e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 55.04  E-value: 5.48e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWF-----LTNLNTWD 197
Cdd:MTH00196   1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLcgttgGLHLSYIN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  198 LQQIFMLNPSDSNMP----LIGLALAATGKSAQFglHPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLIRFYPLTENnky 272
Cdd:MTH00196  81 LVLNSGQSFSSVSVPigylLIIVALLFKLSVAPF--HMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLNVN--- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  273 iqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQpYLAFLHICTHAFFKAMLFMCSGSIIHSLND 352
Cdd:MTH00196 154 ---ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGS-FESIQASLVYLFIYIIMSICVFSIILALNV 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  353 EQD-IRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAnTSYTNAWALLMTLIATSFTAIYSTRIIFFAL 431
Cdd:MTH00196 230 YKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRIVKILF 308
                        330       340
                 ....*....|....*....|....*....
gi 70987619  432 LGQPRFPTLVNINENNPLLINSIKRLLIG 460
Cdd:MTH00196 309 FQANSFLLISTKILKKENKINLRKALLIG 337
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
76-346 7.77e-08

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 55.18  E-value: 7.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTWsimeFSMWYMYSDPNINKFFKYLLLfliTMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK06459  40 YEYNGVLSFFSIISTIVWILASL----YSIEYDHYGKWLSSLYILTIL---GMAIVLTSDNYLLFLAGWEIMTIPSYVAI 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  156 GWWygrADANTAALQAILYNRIGDIGFILAMAWFLTNLNTwdlqqiFMLNPSDSNMPLIGLALAATGKSAQFGLH--PWL 233
Cdd:PRK06459 113 ALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGT------TNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWL 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  234 PSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPLTENN--KYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTS--- 307
Cdd:PRK06459 184 PIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIpiGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIenn 262
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 70987619  308 ----SQLGLMMVT------IGINQPYLAFLHICTHAFFKAMLFMCSGSI 346
Cdd:PRK06459 263 gailVALGLYMVTkqlitsIEHFSLITVILYSFAHSVAKTGLFLSSGLQ 311
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
192-397 8.58e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 54.44  E-value: 8.58e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  192 NLNTWDLQQifMLNPSDSNMpligLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfypLTENNK 271
Cdd:MTH00112  80 NTGQWDITQ--LTNPTSCTL----LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNS 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  272 YIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLHICTHAFFKAMLFMcsgsIIHSLN 351
Cdd:MTH00112 149 LNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS 223
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 70987619  352 dEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 397
Cdd:MTH00112 224 -TKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQ 268
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
76-423 1.21e-07

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 54.56  E-value: 1.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNIN-KFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFL 153
Cdd:MTH00206  51 SNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRqRIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLL 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  154 LIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLA--LAATGKSAQFGLHP 231
Cdd:MTH00206 131 LITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLAciLAFLVKLPLYGVHL 210
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  232 WLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFY----PLTENNKYIQSITLCLGAIttlFTAMCALTQNDIKK 300
Cdd:MTH00206 211 WLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIIlilgPSTKLSSYFFIILGLWGSI---MTSSICLRQTDLKS 280
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  301 IIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFmCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGS 377
Cdd:MTH00206 281 LIAYSSVSHMSLVTAGILSGSPWGfkgALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFF 359
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 70987619  378 LALTGMPFLTGFYSKDLIIEAANTSYTnaWALLMTLIATSFTAIYS 423
Cdd:MTH00206 360 LANLGLPPFPNLFGELLIITSLFSWSN--FTLPLLGLGFLFTAIYS 403
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
68-405 5.07e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 52.43  E-value: 5.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   68 WLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSdpninkffkyLLLFLITMLILVTANNLFQLFIGWEGV 147
Cdd:PRK12664  26 LYDWSEPVYNLDLVLFIVLSFSLALIFLYILPIKNMRFSEMLC----------YLLYYISSIAAISSSSLTLVVIGFEFM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  148 GIMSFLLIGWWYGRADANTAALQAILYNRIGDIgFILAMAWFLTNLNTWDLQQIFMLnpsdsnmplIGLALAAtgksAQF 227
Cdd:PRK12664  96 ALSALMIIAAGCPGGNIGAFIHYACVHFFSGVL-LLVGASGQAQNGQYTGYCKLLFM---------LGLLINC----ACF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEnnkyiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:PRK12664 162 PASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFSGEE-------ILLFLGIITAIYGIIFASLEQNIRRLLCYNVV 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  308 SQLGLMMVTIGINQPY-----LAFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKaMPFTTTALIVGSLALTG 382
Cdd:PRK12664 235 GQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR-TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGA 312
                        330       340
                 ....*....|....*....|...
gi 70987619  383 MPFLTGFYSKDLIIEAANTSYTN 405
Cdd:PRK12664 313 FPGTAGFVSKSLITHSIDTAGLT 335
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
121-469 5.83e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 51.89  E-value: 5.83e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  121 LLLFLITM----LILVTANNLFQLFIGWEgVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:MTH00200   6 LPLFILSLglgtLLTFSSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  197 DLQQifMLNPSDSNMPLIGLALaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNkyiqsI 276
Cdd:MTH00200  85 GISE--MLGPLSETLILLALAL----KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----I 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  277 TLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLHicthaFFKAMLFMCSGSIIHSLNDEQDI 356
Cdd:MTH00200 154 LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKI 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  357 RKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIeAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPR 436
Cdd:MTH00200 228 NSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-QELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSP 306
                        330       340       350
                 ....*....|....*....|....*....|...
gi 70987619  437 FPTLVNINENNPLLINSIKRLLIGSLFAGYIIS 469
Cdd:MTH00200 307 NQINMMSSWRTKSNSNLLVGLLLLLSILGLPLT 339
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
76-317 9.00e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 48.44  E-value: 9.00e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTwSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLL 154
Cdd:MTH00205  49 ISSSFSFDSLSLPLIMLSFWIS-LLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSfSVDNLLLFYITFEASLIPTLIL 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  155 IGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPL--IGLALAATGKSAQFGLHPW 232
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLywIFLMLAFLVKLPMYFVHLW 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  233 LPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAF 304
Cdd:MTH00205 208 LPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAY 280
                        250
                 ....*....|...
gi 70987619  305 STSSQLGLMMVTI 317
Cdd:MTH00205 281 SSVGHMGLMVVGV 293
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
64-446 1.52e-05

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 47.66  E-value: 1.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   64 SNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFsmwymYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIG 143
Cdd:MTH00044  48 SSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIA 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  144 WEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGL-----AL 218
Cdd:MTH00044 123 FETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIwwifcIL 202
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  219 AATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFYPL--TENNKYIQSITLCLGAITTLFTA 289
Cdd:MTH00044 203 AFLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRLINLfsLPSANNISFILIVFCCWGALITS 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  290 MCALTQNDIKKIIAFSTSSQLGLMMVTI------GINQpylAFLHICTHAFFKAMLFmCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:MTH00044 276 IICLRQTDLKALIAYSSVGHMSLVAAGIfsgtnwGING---ALILMIAHGLVSSALF-CLANILYERSGTRTLSITRGFK 351
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTsyTNAWALLMTLIATSFTAIYSTRIifFALLGQPRFPTLVNI 443
Cdd:MTH00044 352 LITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIIS--WSILSFPIIGLATVFGAIYSLLI--YQLTNSGSFPSWISN 427

                 ...
gi 70987619  444 NEN 446
Cdd:MTH00044 428 VSP 430
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
61-321 4.98e-05

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 46.27  E-value: 4.98e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   61 LIISNWHWLTIQTLKLSLSFKMDYFS--MMFIPVALFVTW--SIMEFSMWYMYSDPNINKFFKYLLLFLITMLILV-TAN 135
Cdd:MTH00014  31 LLLSLFTLLNLYPMSAPYSMFTESLSsdMLSAPLITLTLWitALMILASFKIFQNNKAPKTFMTNILILNLILLLTfSAS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  136 NLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSD--SNMPL 213
Cdd:MTH00014 111 NLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIylMNLWW 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  214 IGLALAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-YPLTENNKYIQSITLCLGAITT 285
Cdd:MTH00014 191 LITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMsSLFMHINKSLSAPFSSISLVGA 263
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 70987619  286 LFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 321
Cdd:MTH00014 264 VITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
113-423 2.17e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 44.18  E-value: 2.17e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  113 NINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLT 191
Cdd:MTH00127  91 NRQRMYITLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  192 NLNTWDL-----QQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAG---IFLLIR 262
Cdd:MTH00127 171 STGTLSMltlqySQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGygmMRMMVM 250
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  263 FYPLTENNKYIQSITLCLGAITTlfTAMCaLTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAML 339
Cdd:MTH00127 251 LDPLTKELSYPFIILALWGIIMT--GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftgALILMIAHGLTSSAL 327
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  340 FmCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYtnaWALLMTLIATSF 418
Cdd:MTH00127 328 F-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLfNWSP---WTLALTGLGTLI 403

                 ....*
gi 70987619  419 TAIYS 423
Cdd:MTH00127 404 TAGYS 408
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
76-313 2.36e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 43.67  E-value: 2.36e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619   76 LSLSFKMDYFSMMFIPVALFVTwSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGI-MSFL 153
Cdd:MTH00150  16 LSELFSVDSMSSLLISLSLWIS-GLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIpTLLL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  154 LIGWWYgradaNTAALQAILYNRIGDIG----FILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLA--LAATGKSAQF 227
Cdd:MTH00150  95 ILGWGY-----QPERLQAGMYMMLYTVGaslpLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLvfLAFLVKLPMY 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  228 GLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLTE-NNKYIQSITLCLGAITTLFTAMCALTQNDIK 299
Cdd:MTH00150 170 PFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSDVK 242
                        250
                 ....*....|....
gi 70987619  300 KIIAFSTSSQLGLM 313
Cdd:MTH00150 243 SLIAYSSVGHMSLV 256
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
227-422 1.30e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 41.41  E-value: 1.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIqsitLCLGAITTLFTAMCALTQNDIKKIIAFST 306
Cdd:MTH00144 101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLL----CVISVLSALVGSIGGLNQTQVRALLAYSS 176
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  307 SSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLndeqdirKMGGLFKAMPFTTTALIVGSLALTGMPFL 386
Cdd:MTH00144 177 ISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDLGSLKPSYKTGLSIISLLLSLGGLPPF 249
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 70987619  387 TGFYSKDLIIEAANTSytNAWALLMTLIATSFTAIY 422
Cdd:MTH00144 250 LGFCSKLLVLISSMES--SPLLLILLLLLGSLISLF 283
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
185-397 1.55e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 41.06  E-value: 1.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  185 AMAWFLTNLNTWDLQQIFMLNPSdSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFY 264
Cdd:MTH00070  68 ALILFSSTINAWFTGEWTIMNMQ-TPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQIS 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  265 PLTENNkyiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLH-----ICTHAFFKAML 339
Cdd:MTH00070 147 HLLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLM 220
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 70987619  340 FMCSGSiihslndeqdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 397
Cdd:MTH00070 221 NLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQ 268
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
230-396 1.85e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 41.16  E-value: 1.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFYPLTEnnkyiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:MTH00199 210 HMWAPDVYEGaPTITTALL--ATVPKIGVFsILVQIGPVTN-------VVLICAVLSIIYGAIGALNQTKIKRLLAYSGI 280
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  308 SQLG--LMMVTIGINQPYLAFLhicTHAFFKAMLFMCSGSIIHSLNDEQD-IRKMGGLFKAMPFTTTALIVGSLALTGMP 384
Cdd:MTH00199 281 GHMGfiLFGVAIGSFESIQASL---IYMIIYVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIAGIP 357
                        170
                 ....*....|..
gi 70987619  385 FLTGFYSKDLII 396
Cdd:MTH00199 358 PLAGFLSKWLIL 369
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
122-423 2.19e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 40.67  E-value: 2.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  122 LLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQ 200
Cdd:MTH00068  99 LIILQLTLILAfSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLIL 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  201 IFMLNPSDSNMPLIGL-----ALAATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFYP-LT 267
Cdd:MTH00068 179 LELMSPMQLMTYTNKIwwlacLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISIlLT 251
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  268 ENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFmCSG 344
Cdd:MTH00068 252 PLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSfsgAIILMISHGLTSSALF-CLA 330
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70987619  345 SIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYtnaWALLMTLIATSFTAIYS 423
Cdd:MTH00068 331 NTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLfNWSN---WTILITGLGTLITAAYT 407
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH