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Conserved domains on  [gi|1746316839]
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Chain A, Ubiquinol-cytochrome C chaperone

Protein Classification

ubiquinol-cytochrome C chaperone family protein( domain architecture ID 10009309)

ubiquinol-cytochrome C chaperone family protein is required for the assembly of the ubiquinol-cytochrome c reductase complex (mitochondrial respiratory chain complex III or cytochrome b-c1 complex)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5452 COG5452
Uncharacterized conserved protein [Function unknown];
1-176 3.23e-69

Uncharacterized conserved protein [Function unknown];


:

Pssm-ID: 444203  Cd Length: 178  Bit Score: 208.19  E-value: 3.23e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839   1 MILQLFRRKskANEAIVLRVYEVIVAAARQKRFYAQFQVPDTPLGRYEMLSLHIFLALHRMKGENPALNALAQEIADEFF 80
Cdd:COG5452     1 MLFSLFRRR--RRRAAVEALYGAIVAQARQPAFYADLGVPDTVEGRFDMLSLHLFLVLRRLRAEGEAAAELAQALFDAFF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839  81 KDVDHSLRELGIGDQGVPKRMKKLARMFYGRVGAYGAALDANDAQALAAALTRNIRPDLEFWPHAC-YLGAYVLQCRDCL 159
Cdd:COG5452    79 DDMDASLREMGVGDLSVPKRMKKLAEAFYGRAGAYDAALDAGDDAALAAALARNVYGGAEEAPAAAaALAAYVRAAAAAL 158

                         170
                  ....*....|....*..
gi 1746316839 160 REISDEALAAGDISYMD 176
Cdd:COG5452   159 AAQPLDDLLAGRLAFPD 175
 
Name Accession Description Interval E-value
COG5452 COG5452
Uncharacterized conserved protein [Function unknown];
1-176 3.23e-69

Uncharacterized conserved protein [Function unknown];


Pssm-ID: 444203  Cd Length: 178  Bit Score: 208.19  E-value: 3.23e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839   1 MILQLFRRKskANEAIVLRVYEVIVAAARQKRFYAQFQVPDTPLGRYEMLSLHIFLALHRMKGENPALNALAQEIADEFF 80
Cdd:COG5452     1 MLFSLFRRR--RRRAAVEALYGAIVAQARQPAFYADLGVPDTVEGRFDMLSLHLFLVLRRLRAEGEAAAELAQALFDAFF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839  81 KDVDHSLRELGIGDQGVPKRMKKLARMFYGRVGAYGAALDANDAQALAAALTRNIRPDLEFWPHAC-YLGAYVLQCRDCL 159
Cdd:COG5452    79 DDMDASLREMGVGDLSVPKRMKKLAEAFYGRAGAYDAALDAGDDAALAAALARNVYGGAEEAPAAAaALAAYVRAAAAAL 158

                         170
                  ....*....|....*..
gi 1746316839 160 REISDEALAAGDISYMD 176
Cdd:COG5452   159 AAQPLDDLLAGRLAFPD 175
Ubiq_cyt_C_chap pfam03981
Ubiquinol-cytochrome C chaperone;
36-172 1.62e-41

Ubiquinol-cytochrome C chaperone;


Pssm-ID: 461119  Cd Length: 137  Bit Score: 136.21  E-value: 1.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839  36 QFQVPDTPLGRYEMLSLHIFLALHRMKGENPALNALAQEIADEFFKDVDHSLRELGIGDQGVPKRMKKLARMFYGRVGAY 115
Cdd:pfam03981   1 HLGVPDTFNGRFQMTVLHVWLLLRRLRAEGPEGRELAQELFDRFFEDVDARLREEGVGDLSVPKRMKKLAEAFYGRLLAY 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1746316839 116 GAALDANDAQALAAALtRNIRPDLEF-WPHACYLGAYVLQCRDCLREISDEALAAGDI 172
Cdd:pfam03981  81 DEALGSDDAALAAALW-RNLYKGRDVdLEALAGLVGYVRAQLAHLDALSDEALLVGGF 137
 
Name Accession Description Interval E-value
COG5452 COG5452
Uncharacterized conserved protein [Function unknown];
1-176 3.23e-69

Uncharacterized conserved protein [Function unknown];


Pssm-ID: 444203  Cd Length: 178  Bit Score: 208.19  E-value: 3.23e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839   1 MILQLFRRKskANEAIVLRVYEVIVAAARQKRFYAQFQVPDTPLGRYEMLSLHIFLALHRMKGENPALNALAQEIADEFF 80
Cdd:COG5452     1 MLFSLFRRR--RRRAAVEALYGAIVAQARQPAFYADLGVPDTVEGRFDMLSLHLFLVLRRLRAEGEAAAELAQALFDAFF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839  81 KDVDHSLRELGIGDQGVPKRMKKLARMFYGRVGAYGAALDANDAQALAAALTRNIRPDLEFWPHAC-YLGAYVLQCRDCL 159
Cdd:COG5452    79 DDMDASLREMGVGDLSVPKRMKKLAEAFYGRAGAYDAALDAGDDAALAAALARNVYGGAEEAPAAAaALAAYVRAAAAAL 158

                         170
                  ....*....|....*..
gi 1746316839 160 REISDEALAAGDISYMD 176
Cdd:COG5452   159 AAQPLDDLLAGRLAFPD 175
Ubiq_cyt_C_chap pfam03981
Ubiquinol-cytochrome C chaperone;
36-172 1.62e-41

Ubiquinol-cytochrome C chaperone;


Pssm-ID: 461119  Cd Length: 137  Bit Score: 136.21  E-value: 1.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1746316839  36 QFQVPDTPLGRYEMLSLHIFLALHRMKGENPALNALAQEIADEFFKDVDHSLRELGIGDQGVPKRMKKLARMFYGRVGAY 115
Cdd:pfam03981   1 HLGVPDTFNGRFQMTVLHVWLLLRRLRAEGPEGRELAQELFDRFFEDVDARLREEGVGDLSVPKRMKKLAEAFYGRLLAY 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1746316839 116 GAALDANDAQALAAALtRNIRPDLEF-WPHACYLGAYVLQCRDCLREISDEALAAGDI 172
Cdd:pfam03981  81 DEALGSDDAALAAALW-RNLYKGRDVdLEALAGLVGYVRAQLAHLDALSDEALLVGGF 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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