SNF2 family N-terminal domain protein, partial [Triticum turgidum subsp. dicoccum]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| HepA super family | cl33945 | Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, ... |
1-49 | 3.30e-16 | ||
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair]; The actual alignment was detected with superfamily member COG0553: Pssm-ID: 440319 [Multi-domain] Cd Length: 682 Bit Score: 70.64 E-value: 3.30e-16
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| Name | Accession | Description | Interval | E-value | ||
| HepA | COG0553 | Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, ... |
1-49 | 3.30e-16 | ||
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair]; Pssm-ID: 440319 [Multi-domain] Cd Length: 682 Bit Score: 70.64 E-value: 3.30e-16
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| PLN03142 | PLN03142 | Probable chromatin-remodeling complex ATPase chain; Provisional |
1-48 | 1.87e-06 | ||
Probable chromatin-remodeling complex ATPase chain; Provisional Pssm-ID: 215601 [Multi-domain] Cd Length: 1033 Bit Score: 42.87 E-value: 1.87e-06
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| SF2_C_SNF | cd18793 | C-terminal helicase domain of the SNF family helicases; The Sucrose Non-Fermenting (SNF) ... |
1-24 | 1.95e-05 | ||
C-terminal helicase domain of the SNF family helicases; The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC. Pssm-ID: 350180 [Multi-domain] Cd Length: 135 Bit Score: 39.38 E-value: 1.95e-05
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| Name | Accession | Description | Interval | E-value | ||
| HepA | COG0553 | Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, ... |
1-49 | 3.30e-16 | ||
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair]; Pssm-ID: 440319 [Multi-domain] Cd Length: 682 Bit Score: 70.64 E-value: 3.30e-16
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| PLN03142 | PLN03142 | Probable chromatin-remodeling complex ATPase chain; Provisional |
1-48 | 1.87e-06 | ||
Probable chromatin-remodeling complex ATPase chain; Provisional Pssm-ID: 215601 [Multi-domain] Cd Length: 1033 Bit Score: 42.87 E-value: 1.87e-06
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| SF2_C_SNF | cd18793 | C-terminal helicase domain of the SNF family helicases; The Sucrose Non-Fermenting (SNF) ... |
1-24 | 1.95e-05 | ||
C-terminal helicase domain of the SNF family helicases; The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC. Pssm-ID: 350180 [Multi-domain] Cd Length: 135 Bit Score: 39.38 E-value: 1.95e-05
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| Blast search parameters | ||||
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