hypothetical protein H359_0302 [Chlamydia ibidis 10-1398/6]
Protein Classification
macro domain-containing protein( domain architecture ID 1211)
macro domain-containing protein functions in the recognition, interpretation, and turnover of ADP-ribose (ADPr) signaling
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Macro_SF super family | cl00019 | macrodomain superfamily; Macrodomains are found in a variety of proteins with diverse cellular ... |
226-285 | 2.74e-03 | ||
macrodomain superfamily; Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. Macrodomains include the yeast macrodomain Poa1 which is a phosphatase of ADP-ribose-1"-phosphate, a by-product of tRNA splicing. Some macrodomains have ADPr-unrelated binding partners such as the coronavirus SUD-N (N-terminal subdomain) and SUD-M (middle subdomain) of the SARS-unique domain (SUD) which bind G-quadruplexes (unusual nucleic-acid structures formed by consecutive guanosine nucleotides). Macrodomains regulate a wide variety of cellular and organismal processes, including DNA damage repair, signal transduction, and immune response. The actual alignment was detected with superfamily member smart00506: Pssm-ID: 469581 Cd Length: 133 Bit Score: 37.67 E-value: 2.74e-03
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| Name | Accession | Description | Interval | E-value | ||
| A1pp | smart00506 | Appr-1"-p processing enzyme; Function determined by Martzen et al. Extended family detected by ... |
226-285 | 2.74e-03 | ||
Appr-1"-p processing enzyme; Function determined by Martzen et al. Extended family detected by reciprocal PSI-BLAST searches (unpublished results, and Pehrson _ Fuji). Pssm-ID: 214701 Cd Length: 133 Bit Score: 37.67 E-value: 2.74e-03
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| Name | Accession | Description | Interval | E-value | ||
| A1pp | smart00506 | Appr-1"-p processing enzyme; Function determined by Martzen et al. Extended family detected by ... |
226-285 | 2.74e-03 | ||
Appr-1"-p processing enzyme; Function determined by Martzen et al. Extended family detected by reciprocal PSI-BLAST searches (unpublished results, and Pehrson _ Fuji). Pssm-ID: 214701 Cd Length: 133 Bit Score: 37.67 E-value: 2.74e-03
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