NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|34529176|dbj|BAC85653|]
View 

unnamed protein product [Homo sapiens]

Protein Classification

A2M and A2M_2 domain-containing protein( domain architecture ID 10446161)

protein containing domains A2M, A2M_2, and A2M_recep

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
191-486 1.16e-162

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


:

Pssm-ID: 239227  Cd Length: 292  Bit Score: 468.98  E-value: 1.16e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 191 ALQNLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERDGNGNT 270
Cdd:cd02897   1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDKSGST 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 271 WLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVDDEVSLTAYVTAALLEMGKDVDDP 350
Cdd:cd02897  81 WLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSERP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 351 MVSQGLWCLKNSATSTTNLYTQALLAYIFSLAGeMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEPAAVDVE 430
Cdd:cd02897 161 VVEKALSCLEAALDSISDPYTLALAAYALTLAG-SEKRPEALKKLDELAISEDGTKHWSRPPPSEEGPSYYWQAPSAEVE 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 34529176 431 LTAYALLAQLTKPsltQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:cd02897 240 MTAYALLALLSAG---GEDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
595-685 1.09e-32

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


:

Pssm-ID: 462226  Cd Length: 92  Bit Score: 121.14  E-value: 1.09e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   595 SSSNMAIVEVKMLSGFSPMEGTNQLLLQQPLVKKVE-FGTDTLNIYLDELIKNTQTYTFTISQSVLVTNLKPATIKVYDY 673
Cdd:pfam07677   1 ESSNMAILEVGLPSGFVPDEEDLKKLGVDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                          90
                  ....*....|..
gi 34529176   674 YLPDEQATIQYS 685
Cdd:pfam07677  81 YEPERRATTFYS 92
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
1-61 1.79e-22

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


:

Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 91.88  E-value: 1.79e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 34529176     1 MSFCTSQSRGFGLSPTVGLTAFKPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDL 61
Cdd:pfam00207  31 TAFALSPDTGLGVAEPPELVVFKPFFVDLNLPYSVRRGEQFELKATVFNYLDKCLKVRVRL 91
 
Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
191-486 1.16e-162

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


Pssm-ID: 239227  Cd Length: 292  Bit Score: 468.98  E-value: 1.16e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 191 ALQNLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERDGNGNT 270
Cdd:cd02897   1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDKSGST 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 271 WLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVDDEVSLTAYVTAALLEMGKDVDDP 350
Cdd:cd02897  81 WLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSERP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 351 MVSQGLWCLKNSATSTTNLYTQALLAYIFSLAGeMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEPAAVDVE 430
Cdd:cd02897 161 VVEKALSCLEAALDSISDPYTLALAAYALTLAG-SEKRPEALKKLDELAISEDGTKHWSRPPPSEEGPSYYWQAPSAEVE 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 34529176 431 LTAYALLAQLTKPsltQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:cd02897 240 MTAYALLALLSAG---GEDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
TED_complement pfam07678
A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement ...
181-486 3.94e-150

A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement components such as C3, C4 and C5. This domain contains a short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved.


Pssm-ID: 462227 [Multi-domain]  Cd Length: 311  Bit Score: 437.89  E-value: 3.94e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   181 VTVLGDIMGTALQ----NLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNG 256
Cdd:pfam07678   1 ISVVGDIMGPAIQvvpeNLSSLLRLPYGCGEQNMVLFAPNVYVLRYLDKTNQLTKLIKSKAIDYLEQGYQRQLSYKHPDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   257 SYSAFGERDGNgnTWLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVDDEVSLTAYV 336
Cdd:pfam07678  81 SYSAFGHSPGS--TWLTAFVLKVFAQARKFIFIDPEEICQSLRWLLSQQKPDGSFREPGPLLHRAMKGGVDGEVSLTAYV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   337 TAALLEM-----GKDVDDPMVSQGLWCLKN-SATSTTNLYTQALLAYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQ 410
Cdd:pfam07678 159 TIALLEAldingLLQRVHPSIRKALTYLEQaQLAGLTSPYTLAILAYALALAGSPETREELLKSLDAMAREEGNSRYWER 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 34529176   411 KPTPSSNASPW--SEPAAVDVELTAYALLAQltkpsLTQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:pfam07678 239 DEKSDPQGVPEypPQAPSLEVETTAYALLAY-----LLLGDLTYADPIVKWLTSQRNSHGGFSSTQDTVVALQALAEY 311
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
595-685 1.09e-32

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


Pssm-ID: 462226  Cd Length: 92  Bit Score: 121.14  E-value: 1.09e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   595 SSSNMAIVEVKMLSGFSPMEGTNQLLLQQPLVKKVE-FGTDTLNIYLDELIKNTQTYTFTISQSVLVTNLKPATIKVYDY 673
Cdd:pfam07677   1 ESSNMAILEVGLPSGFVPDEEDLKKLGVDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                          90
                  ....*....|..
gi 34529176   674 YLPDEQATIQYS 685
Cdd:pfam07677  81 YEPERRATTFYS 92
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
23-653 2.35e-26

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 115.95  E-value: 2.35e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   23 KPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDLAKSHEYQLESwADSQTSScLCADEAKTHHWNITAVKLGHIN 102
Cdd:COG2373  984 KPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGGLTLEG-EATQTVT-LAAGGRATVRFPLKAPDAGDAK 1061
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  103 FTISTKildsnepcggqkgfvpQKGRSDTLIKPVLVKPEGVLVEKTHSSLLCPKgkvASESVSLELPVDIVPDSTKAYVT 182
Cdd:COG2373 1062 VTVTAT----------------GGGESDAREVELPVRPANPLVTRATSGVLAPG---ESWTLPLDLPGGLRPGTGSLTLS 1122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  183 VLGDIMGTALQNLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLT---EEIRSRavgfLEIGYQKELMYKHSNGSYS 259
Cdd:COG2373 1123 LSSSPPLDLAGLLRYLLRYPYGCTEQTTSRALPLLYLSDLAEALGLKGdkdAELRAR----IQAAIARLLSMQNSDGGFG 1198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  260 AFGeRDGNGNTWLTAFVTKCFGQAQKF-IFIDPKNIQDALKWMAgNQLPSGcyanvgnllhTAMKGGVDDEVSLTAYVTA 338
Cdd:COG2373 1199 LWP-GGSESDPWLTAYATDFLLEAREAgYAVPDDALDRALDYLR-NYLRNP----------WEIEYDDAYRLAVRAYALY 1266
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  339 ALLEMGKDVDDPMVSqglwcLKNSATSTTNLYTQALLAYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQkpTPSSna 418
Cdd:COG2373 1267 VLARAGKADLGDLRY-----LYDRRKDALSPLAKAQLAAALALLGDKARAEELLAAALARLRETGARDYWYG--DYGS-- 1337
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  419 spwsepaavDVELTAYAL-LAQLTKPSLTQkeiakATSIVAWLAKQRNAyGGFSSTQDTVVALQALAKYAtTAYVPSEEI 497
Cdd:COG2373 1338 ---------PLRDQALALaLLAELGPDAPL-----APKLARWLAKALKS-GRWLSTQETAWALLALAAYA-RAAGASPDF 1401
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  498 NLVVKSTENFQRTFNIQSVNRLVFQQDTLPNVPgmYTLEASGQGCVYVQTVLRY--NILPPTNMKT-FSLSVEIgKARCE 574
Cdd:COG2373 1402 TATLTLDGKTLPLTGRGPLARVTLPAAELLAGP--LTITNTGDGPLYYTLTLSGypAEGPPPAASNgLEIERRY-YDLDG 1478
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  575 QPTSPRSLT--------LTIHTSyvgSRSSSNMAIVEvkML-SGFspmEGTNQLLLQQPLVKK----------VEFGTDT 635
Cdd:COG2373 1479 KPIDPASLKqgdlvvvrLTVTAP---SGRVENVAVVD--PLpAGF---EIENPRLATSGDLGDwlgdswqpdhQEFRDDR 1550
                        650
                 ....*....|....*...
gi 34529176  636 LNIYLDelIKNTQTYTFT 653
Cdd:COG2373 1551 VVAAFD--LDPAGTYTFA 1566
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
1-61 1.79e-22

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 91.88  E-value: 1.79e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 34529176     1 MSFCTSQSRGFGLSPTVGLTAFKPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDL 61
Cdd:pfam00207  31 TAFALSPDTGLGVAEPPELVVFKPFFVDLNLPYSVRRGEQFELKATVFNYLDKCLKVRVRL 91
 
Name Accession Description Interval E-value
A2M_2 cd02897
Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy ...
191-486 1.16e-162

Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production contributing to fetal survival. It has been suggested that thioester bond cleavage promotes the binding of PZ and alpha (2)-M to the CD91 receptor clearing them from circulation.


Pssm-ID: 239227  Cd Length: 292  Bit Score: 468.98  E-value: 1.16e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 191 ALQNLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERDGNGNT 270
Cdd:cd02897   1 ALQNLDNLLRMPYGCGEQNMVNFAPNIYVLDYLKATGQLTPEIESKALGFLRTGYQRQLTYKHSDGSYSAFGESDKSGST 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 271 WLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVDDEVSLTAYVTAALLEMGKDVDDP 350
Cdd:cd02897  81 WLTAFVLKSFAQARPFIYIDENVLQQALTWLSSHQKSNGCFREVGRVFHKAMQGGVDDEVALTAYVLIALLEAGLPSERP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 351 MVSQGLWCLKNSATSTTNLYTQALLAYIFSLAGeMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEPAAVDVE 430
Cdd:cd02897 161 VVEKALSCLEAALDSISDPYTLALAAYALTLAG-SEKRPEALKKLDELAISEDGTKHWSRPPPSEEGPSYYWQAPSAEVE 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 34529176 431 LTAYALLAQLTKPsltQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:cd02897 240 MTAYALLALLSAG---GEDLAEALPIVKWLAKQRNSLGGFSSTQDTVVALQALAKY 292
TED_complement pfam07678
A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement ...
181-486 3.94e-150

A-macroglobulin TED domain; This entry corresponds to the TED domain of the complement components such as C3, C4 and C5. This domain contains a short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved.


Pssm-ID: 462227 [Multi-domain]  Cd Length: 311  Bit Score: 437.89  E-value: 3.94e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   181 VTVLGDIMGTALQ----NLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNG 256
Cdd:pfam07678   1 ISVVGDIMGPAIQvvpeNLSSLLRLPYGCGEQNMVLFAPNVYVLRYLDKTNQLTKLIKSKAIDYLEQGYQRQLSYKHPDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   257 SYSAFGERDGNgnTWLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVDDEVSLTAYV 336
Cdd:pfam07678  81 SYSAFGHSPGS--TWLTAFVLKVFAQARKFIFIDPEEICQSLRWLLSQQKPDGSFREPGPLLHRAMKGGVDGEVSLTAYV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   337 TAALLEM-----GKDVDDPMVSQGLWCLKN-SATSTTNLYTQALLAYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQ 410
Cdd:pfam07678 159 TIALLEAldingLLQRVHPSIRKALTYLEQaQLAGLTSPYTLAILAYALALAGSPETREELLKSLDAMAREEGNSRYWER 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 34529176   411 KPTPSSNASPW--SEPAAVDVELTAYALLAQltkpsLTQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:pfam07678 239 DEKSDPQGVPEypPQAPSLEVETTAYALLAY-----LLLGDLTYADPIVKWLTSQRNSHGGFSSTQDTVVALQALAEY 311
A2M_like cd02891
Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier ...
191-486 1.02e-112

Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier protein in serum. It is a broadly specific proteinase inhibitor. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of proteases. This group contains another broadly specific proteinase inhibitor: pregnancy zone protein (PZP). PZP is a trace protein in the plasma of non-pregnant females and males which is elevated in pregnancy. Alpha (2)-M and PZ bind to placental protein-14 and may modulate its activity in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system. This group also contains C3, C4 and C5 of vertebrate complement. The vertebrate complement is an effector of both the acquired and innate immune systems The point of convergence of the classical, alternative and lectin pathways of the complement system is the proteolytic activation of C3. C4 plays a key role in propagating the classical and lectin pathways. C5 participates in the classical and alternative pathways. The thioester bond located within the structure of C3 and C4 is central to the function of complement. C5 does not contain an active thioester bond.


Pssm-ID: 239221 [Multi-domain]  Cd Length: 282  Bit Score: 340.91  E-value: 1.02e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 191 ALQNLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERDGnGNT 270
Cdd:cd02891   1 SLGNLDYLLRYPYGCGEQTMSRAAPNLYVLKYLDATGQLTPEIREKALEYIRKGYQRLLTYQRSDGSFSAWGNSDS-GST 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 271 WLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGVDDEVSLTAYVTAALLEMGKDVDDP 350
Cdd:cd02891  80 WLTAYVVKFLSQARKYIDVDENVLARALGWLVPQQKEDGSFRELGPVIHREMKGGVDDSVSLTAYVLIALAEAGKACDAS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 351 MvSQGLWCLKNSATSTTNLYTQALLAYIFSLAGEMDIRNILLKQLDQQAIISGESIYWsqkptpsSNASPWSEPAAVDVE 430
Cdd:cd02891 160 I-EKALAYLETQLDGLLDPYALAILAYALALAGDSTRADEALKKLLEAAREKGGTAHW-------SLSWPGDYGSSLRVE 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 34529176 431 LTAYALLAQltkpsLTQKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:cd02891 232 ATAYALLAL-----LKLGDLEEAGPIAKWLAQQRNSGGGFLSTQDTVVALQALAAY 282
complement_C3_C4_C5 cd02896
Proteins similar to C3, C4 and C5 of vertebrate complement. The vertebrate complement system, ...
194-486 1.41e-77

Proteins similar to C3, C4 and C5 of vertebrate complement. The vertebrate complement system, comprised of a large number of distinct plasma proteins, is an effector of both the acquired and innate immune systems. The point of convergence of the classical, alternative and lectin pathways of the complement system is the proteolytic activation of C3. C4 plays a key role in propagating the classical and lectin pathways. C5 participates in the classical and alternative pathways. The thioester bond located within the structure of C3 and C4 is central to the function of complement. C5 does not contain an active thioester bond.


Pssm-ID: 239226 [Multi-domain]  Cd Length: 297  Bit Score: 250.27  E-value: 1.41e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 194 NLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGL---LTEEIRSRAVGFLEIGYQKELMYKHSNGSYSAFGERDGNgnT 270
Cdd:cd02896   4 GLEKLIRLPTGCGEQTMIKLAPTVYALRYLDTTNQwekLGPERRDEALKYIRQGYQRQLSYRKPDGSYAAWKNRPSS--T 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 271 WLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMKGGV---DDEVSLTAYVTAALLEmGKDV 347
Cdd:cd02896  82 WLTAFVVKVFSLARKYIPVDQNVICGSVNWLISNQKPDGSFQEPSPVIHREMTGGVegsEGDVSLTAFVLIALQE-ARSI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 348 DDPMVsQGLWCLKNSATS--------TTNLYTQALLAYIFSLAGEmDIRNILLKQLDQQAIISGESIYWSQKPTPSSNAS 419
Cdd:cd02896 161 CPPEV-QNLDQSIRKAISylenqlpnLQRPYALAITAYALALADS-PLSHAANRKLLSLAKRDGNGWYWWTIDSPYWPVP 238
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 34529176 420 PwsePAAVDVELTAYALLAQLTKpsltqKEIAKATSIVAWLAKQRNAYGGFSSTQDTVVALQALAKY 486
Cdd:cd02896 239 G---PSAITVETTAYALLALLKL-----GDIEYANPIARWLTEQRNYGGGFGSTQDTVVALQALAEY 297
ISOPREN_C2_like cd00688
This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two ...
191-486 2.56e-64

This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.


Pssm-ID: 238362 [Multi-domain]  Cd Length: 300  Bit Score: 215.11  E-value: 2.56e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 191 ALQNLDGLVQMPSG--------CGEQNMVLFAPIIYVLQYLEKAGllteeIRSRAVGFLEIGYQKELMYKHSNGSYSAFG 262
Cdd:cd00688   1 IEKHLKYLLRYPYGdghwyqslCGEQTWSTAWPLLALLLLLAATG-----IRDKADENIEKGIQRLLSYQLSDGGFSGWG 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 263 ERDGnGNTWLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVGNLLHTAMkgGVDDEVSLTAYVTAALLE 342
Cdd:cd00688  76 GNDY-PSLWLTAYALKALLLAGDYIAVDRIDLARALNWLLSLQNEDGGFREDGPGNHRIG--GDESDVRLTAYALIALAL 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 343 MGKDVDDPMVSQGLWCLKNSATS--------TTNLYTQALLAYIFSLAGEMDIRNI--LLKQLDQQAIISGESIYWSQKP 412
Cdd:cd00688 153 LGKLDPDPLIEKALDYLLSCQNYdggfgpggESHGYGTACAAAALALLGDLDSPDAkkALRWLLSRQRPDGGWGEGRDRT 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176 413 TPSSNaspwsepaAVDVELTAYALLAQltkpsLTQKEIAKATSIVAWLAKQRNAYGGFSS-------TQDTVVALQALAK 485
Cdd:cd00688 233 NKLSD--------SCYTEWAAYALLAL-----GKLGDLEDAEKLVKWLLSQQNEDGGFSSkpgksydTQHTVFALLALSL 299

                .
gi 34529176 486 Y 486
Cdd:cd00688 300 Y 300
A2M_recep pfam07677
A-macroglobulin receptor binding domain; This family includes the receptor binding domain ...
595-685 1.09e-32

A-macroglobulin receptor binding domain; This family includes the receptor binding domain region of the alpha-2-macroglobulin family.


Pssm-ID: 462226  Cd Length: 92  Bit Score: 121.14  E-value: 1.09e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   595 SSSNMAIVEVKMLSGFSPMEGTNQLLLQQPLVKKVE-FGTDTLNIYLDELIKNTQTYTFTISQSVLVTNLKPATIKVYDY 673
Cdd:pfam07677   1 ESSNMAILEVGLPSGFVPDEEDLKKLGVDPLIKRVEtVDDGKVILYLDKLSGEPLCFSFRAEQTFPVANLKPAPVKVYDY 80
                          90
                  ....*....|..
gi 34529176   674 YLPDEQATIQYS 685
Cdd:pfam07677  81 YEPERRATTFYS 92
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
23-653 2.35e-26

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 115.95  E-value: 2.35e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176   23 KPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDLAKSHEYQLESwADSQTSScLCADEAKTHHWNITAVKLGHIN 102
Cdd:COG2373  984 KPLVVRPSLPRFLAPGDRFELPVDVFNLTGKAGTVTVTLEASGGLTLEG-EATQTVT-LAAGGRATVRFPLKAPDAGDAK 1061
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  103 FTISTKildsnepcggqkgfvpQKGRSDTLIKPVLVKPEGVLVEKTHSSLLCPKgkvASESVSLELPVDIVPDSTKAYVT 182
Cdd:COG2373 1062 VTVTAT----------------GGGESDAREVELPVRPANPLVTRATSGVLAPG---ESWTLPLDLPGGLRPGTGSLTLS 1122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  183 VLGDIMGTALQNLDGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLT---EEIRSRavgfLEIGYQKELMYKHSNGSYS 259
Cdd:COG2373 1123 LSSSPPLDLAGLLRYLLRYPYGCTEQTTSRALPLLYLSDLAEALGLKGdkdAELRAR----IQAAIARLLSMQNSDGGFG 1198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  260 AFGeRDGNGNTWLTAFVTKCFGQAQKF-IFIDPKNIQDALKWMAgNQLPSGcyanvgnllhTAMKGGVDDEVSLTAYVTA 338
Cdd:COG2373 1199 LWP-GGSESDPWLTAYATDFLLEAREAgYAVPDDALDRALDYLR-NYLRNP----------WEIEYDDAYRLAVRAYALY 1266
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  339 ALLEMGKDVDDPMVSqglwcLKNSATSTTNLYTQALLAYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQkpTPSSna 418
Cdd:COG2373 1267 VLARAGKADLGDLRY-----LYDRRKDALSPLAKAQLAAALALLGDKARAEELLAAALARLRETGARDYWYG--DYGS-- 1337
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  419 spwsepaavDVELTAYAL-LAQLTKPSLTQkeiakATSIVAWLAKQRNAyGGFSSTQDTVVALQALAKYAtTAYVPSEEI 497
Cdd:COG2373 1338 ---------PLRDQALALaLLAELGPDAPL-----APKLARWLAKALKS-GRWLSTQETAWALLALAAYA-RAAGASPDF 1401
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  498 NLVVKSTENFQRTFNIQSVNRLVFQQDTLPNVPgmYTLEASGQGCVYVQTVLRY--NILPPTNMKT-FSLSVEIgKARCE 574
Cdd:COG2373 1402 TATLTLDGKTLPLTGRGPLARVTLPAAELLAGP--LTITNTGDGPLYYTLTLSGypAEGPPPAASNgLEIERRY-YDLDG 1478
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34529176  575 QPTSPRSLT--------LTIHTSyvgSRSSSNMAIVEvkML-SGFspmEGTNQLLLQQPLVKK----------VEFGTDT 635
Cdd:COG2373 1479 KPIDPASLKqgdlvvvrLTVTAP---SGRVENVAVVD--PLpAGF---EIENPRLATSGDLGDwlgdswqpdhQEFRDDR 1550
                        650
                 ....*....|....*...
gi 34529176  636 LNIYLDelIKNTQTYTFT 653
Cdd:COG2373 1551 VVAAFD--LDPAGTYTFA 1566
A2M pfam00207
Alpha-2-macroglobulin family; This family includes the C-terminal region of the ...
1-61 1.79e-22

Alpha-2-macroglobulin family; This family includes the C-terminal region of the alpha-2-macroglobulin family.


Pssm-ID: 459711 [Multi-domain]  Cd Length: 91  Bit Score: 91.88  E-value: 1.79e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 34529176     1 MSFCTSQSRGFGLSPTVGLTAFKPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDL 61
Cdd:pfam00207  31 TAFALSPDTGLGVAEPPELVVFKPFFVDLNLPYSVRRGEQFELKATVFNYLDKCLKVRVRL 91
SVA pfam05326
Seminal vesicle autoantigen (SVA); This family consists of seminal vesicle autoantigen and ...
23-93 1.59e-04

Seminal vesicle autoantigen (SVA); This family consists of seminal vesicle autoantigen and prolactin-inducible (PIP) proteins. Seminal vesicle autoantigen (SVA) is specifically present in the seminal plasma of mice. This 19-kDa secretory glycoprotein suppresses the motility of spermatozoa by interacting with phospholipid. PIP, has several known functions. In saliva, this protein plays a role in host defence by binding to microorganizms such as Streptococcus. PIP is an aspartyl proteinase and it acts as a factor capable of suppressing T-cell apoptosis through its interaction with CD4.


Pssm-ID: 398804  Cd Length: 124  Bit Score: 42.00  E-value: 1.59e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 34529176    23 KPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDLAksHEYQLESWADSQTSSCLCADEAKTHHWNI 93
Cdd:pfam05326  32 KPLSLDLKVPSTAKKNNEVTVTLTVKTNVKECMVVKAYLE--SNPPIKGSFNYIYTACLCNDYPRTFFWDI 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH