|
Name |
Accession |
Description |
Interval |
E-value |
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-461 |
1.05e-173 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 496.18 E-value: 1.05e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 4 ADLTVILPEIVLALSAMAALLVGVYTGKDKLAPALIWLMAGLMSALAIWIGTGASGSREAFNGMFVDDGFARFAKVAILL 83
Cdd:COG1007 2 LDLLALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 84 SASAVLVMGQDYMSRRGMLRFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVL 163
Cdd:COG1007 82 AALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 164 GALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEV-SVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFF 242
Cdd:COG1007 162 GALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGAnSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 243 ASAPKVAAMGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQ 322
Cdd:COG1007 242 ATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVS 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 323 ALLVYMAIYVSMNIGTFAFILMMEKDGKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAG 402
Cdd:COG1007 322 AALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAG 401
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568230292 403 LAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGEELETNRSPILWGFLMASAAVMLLGII 461
Cdd:COG1007 402 LYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAPISAPPGLRVALVIAALLVLLLGI 460
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-467 |
3.10e-166 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 477.39 E-value: 3.10e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 1 MIPADLTVILPEIVLALSAMAALLVGVYTGkDKLAPALIWLMAGLMSALAIWIGTGASGSREAFNGMFVDDGFARFAKVA 80
Cdd:PRK05777 3 ITSLNLILLLPELILLGAAVVLLLIDAFVR-RHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 81 ILLSASAVLVMGQDYMSRRGmlRFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKY 160
Cdd:PRK05777 82 ILLASLLALLLARPYLEDRG--RGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKY 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 161 FVLGALSSGLLLYGASLVYGFAGTTDFAGI-YAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVT 239
Cdd:PRK05777 160 FVLGALASGFLLYGMSLLYGATGSLSFAGIaKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 240 AFFASAPKVAAMGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAY 319
Cdd:PRK05777 240 AFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAE 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 320 GVQALLVYMAIYVSMNIGTFAFILMMEKDGKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAY 399
Cdd:PRK05777 320 GYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAV 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 400 QAGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGEELETNRSPILWGFLM--ASAAVMLLGIINMFGVE 467
Cdd:PRK05777 400 EAGLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAVLsvSALLVLVLGIFPQPLLD 469
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
9-462 |
3.56e-115 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 346.94 E-value: 3.56e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 9 ILPEIVLALSAMAALLVGVYTGKDKLAPALIW-LMAGLMSALAIWIGTGASGSREAFNG--MFVDDGFARFAKVAILLSA 85
Cdd:TIGR01770 4 ILPEIILLLGAFILLLYGLFYSRKKRNPLLLKnLSYIVLLSALVSLFLTLQYAAYLFTGfsFFIVDNFALLIKLILLLST 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 86 SAVLVMGQDYMSRRGMLRFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGA 165
Cdd:TIGR01770 84 LLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 166 LSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEVSVGLL-FGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFAS 244
Cdd:TIGR01770 164 FSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLlLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSI 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 245 APKVAAMGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQAL 324
Cdd:TIGR01770 244 VPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAV 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 325 LVYMAIYVSMNIGTFAFILMMEK----DGKPITDIRALNLYSrrePGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQ 400
Cdd:TIGR01770 324 LFYIFIYALMSLGAFGVLSLLRSykdeWIEYISDFAGLFKTN---PILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568230292 401 AGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGEELETNRSPILWGF-LMASAAVMLLGIIN 462
Cdd:TIGR01770 401 SGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSLlLSISALFILFLGLF 463
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-461 |
5.65e-78 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 252.28 E-value: 5.65e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 7 TVILPEIVLALSAMAALLVGVYTGK--DKLAPALIwlMAGLMSALAIWIGTGASGSREAFNGMFVDDGFARFAKVAILLS 84
Cdd:PRK02504 13 GAILPEGIVILTLLGVLLVDLIGGRtaSRWLPYLA--IAGLGAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 85 ASAVLVMGQDYMSRRGMLRFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVAS-LRRDSvKSTEAGLKYFVL 163
Cdd:PRK02504 91 TLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGyMKRDP-RSNEAALKYLLI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 164 GALSSGLLLYGASLVYGFA-GTTDFAGIyAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFF 242
Cdd:PRK02504 170 GAASSAIFLYGSSLLYGLSgGSTQLSAI-ALALITSPSLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 243 ASAPKVAAMGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQ 322
Cdd:PRK02504 249 SVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYA 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 323 ALLVYMAIYVSMNIGTFA-FILMMEKDGK-PITDIRALnlySRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQ 400
Cdd:PRK02504 329 SMVFYLLAYLFMNLGAFAcVILFSLRTGTdQISDYAGL---YQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQ 405
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568230292 401 AGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGE--ELETNRSPILW----------GFLMASAAVMLLGII 461
Cdd:PRK02504 406 AGLYLLVLVGLVTSVISIYYYIRVIKMMVVKEPQEmsDVVKNYPEINWnlpgmrplrvGLVLCVIATALAGIL 478
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
63-435 |
2.74e-76 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 247.22 E-value: 2.74e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 63 AFNGMFVDDGFARFAKVAILLSASAVLVMGQDYMSRRGMLRFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYV 142
Cdd:CHL00049 70 SFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 143 VASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFA-GTTDFAGIYA--VAQHGEVSVGLLFGLVFLISGMAFKVS 219
Cdd:CHL00049 150 LSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSgGEIELQEIVNglINTQMYNSPGISIALIFITVGIGFKLS 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 220 AVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMA 299
Cdd:CHL00049 230 LAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 300 YSSIAHMGYALMGLAAGTAY-GVQALLVYMAIYVSMNIGTFA-FILMMEKDGkpiTD-IRALNLYSRREPGKALAMLILL 376
Cdd:CHL00049 310 YSSIGQIGYVIIGIIVGDSNdGYASMITYMLFYIFMNLGTFAcIVLFGLRTG---TDnIRDYAGLYTKDPFLALSLALCL 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 568230292 377 FSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGE 435
Cdd:CHL00049 387 LSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQE 445
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-430 |
1.25e-74 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 241.84 E-value: 1.25e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 8 VILPEIVLALSAMAALLVGVYTGKDKLApALIWLMAGLMSALAIWIGTGASGSREAFNGMFVDDGFARFAKVAILLSASA 87
Cdd:MTH00199 3 IINPEVLLSLVVLSLVLYGVNLSTLKLS-IGVLLLIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWIIISKIIIIIGSIS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 88 VLVMGqDYMSRRGMLRFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALS 167
Cdd:MTH00199 82 ILLMG-SGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 168 SGLLLYGASLVYGFAGTTDFAGIYAVaqhGEVSVGLLFGLVFLIsgmaFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPK 247
Cdd:MTH00199 161 SGLFLFGCALLYGLTGETSIQGINSI---LTGDVGKILITISLL----FKLSAAPFHMWAPDVYEGAPTITTALLATVPK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 248 VaamGLFARVLHDAFGhavqdwSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVY 327
Cdd:MTH00199 234 I---GVFSILVQIGPV------TNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIY 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 328 MAIYVSMNIGTFAFILMMEKDGKPITDIRALnlySRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLA 407
Cdd:MTH00199 305 MIIYVIMSICSFSIILSLKLTKGLIVEVSGL---SRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLIC 381
|
410 420
....*....|....*....|...
gi 568230292 408 IAGVIASVIGAFYYLRIVYYMYF 430
Cdd:MTH00199 382 IIAVLSSVIAGVYYVRVVQIIYF 404
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
123-414 |
6.97e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 229.51 E-value: 6.97e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 123 AGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEVSVG 202
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 203 LLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFAS-APKVAAMGLFARVLHDAFghAVQDWSQVIALLSLLSM 281
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAAtLVKAGGYGLIRRSLLYLP--SSPFIQQILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 282 FVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTFAFILMMEKDGKPITDIRALNLY 361
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGL 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 568230292 362 SRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIAS 414
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
114-430 |
2.89e-66 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 217.21 E-value: 2.89e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 114 AVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAV 193
Cdd:MTH00196 3 ALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 194 AQHGE--VSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVaamGLFARVLhdAFGHAVqdwsQ 271
Cdd:MTH00196 83 LNSGQsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL---GIFSILV--SIGLNV----N 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 272 VIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTFAFILMMekdGKP 351
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILAL---NVY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568230292 352 ITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYF 430
Cdd:MTH00196 231 KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFF 309
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
68-428 |
3.46e-51 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 179.19 E-value: 3.46e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 68 FVDDGFARFAKVAILLSASAVLVMGQDYMSRRGMLRFEYPiLVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLR 147
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYP-LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 148 RDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEVSVgLLFGLVFLISGMAFKVSAVPFHMWT 227
Cdd:COG0651 151 GTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGL-LLAAFALLLVGFGIKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 228 PDVYEGAPTPVTAFFASA-PKVAAMGLFaRVLHDAFGHAVQD-WSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAH 305
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLlTKVGVYAIL-RVLTLLFGADPALfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 306 MGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTF--AFILMMEKDGKPITDIRALnlySRREPGKALAMLILLFSLAGVP 383
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFlaAGAIERATGTRDLDKLGGL---GKRMPLTAAAFLIGALALAGLP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568230292 384 PMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYM 428
Cdd:COG0651 385 PLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
81-430 |
7.71e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 179.67 E-value: 7.71e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 81 ILLSASAVLVMGQDYMSRRGMlrfeypILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKST------ 154
Cdd:MTH00198 171 ILLSLMGLLFLTNERGPRSGF------ALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgnt 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 155 --EAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEVSVGLL---FGLVFLISGMAFKVSAVPFHMWTPD 229
Cdd:MTH00198 245 ppESGLKYWILGAMSSGFYLFGCALYFGFTGNEGMLGTILSATLETTNIELRqgsLGYLFITVAILFKLAAAPFHMWTPD 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 230 VYEGAPTPVTAFFASAPKVAAMGLFARVLHDafghavqdwSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYA 309
Cdd:MTH00198 325 VYEGAPTPTTALIAIIPKFTVYILLTSLVIT---------SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFI 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 310 LMGLAAGTAYGVQALLVYMAIYVSMNIGTFAFILMMEKDG----------------KPITDIRALNLYSRREPGKALAML 373
Cdd:MTH00198 396 LIGVSAGTYESLQASWTYAVTYLVSALASFTVICTLEEFGtrtptsrqrdgsfgnyNLVRRLVDLTILSRGQPYIAFSLA 475
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568230292 374 ILLFSLAGVPPMLGFFGKLYVL----NAAYQAGLA---WLAIAGVIASVIGAFYYLRIVYYMYF 430
Cdd:MTH00198 476 IVFLSLAGIPPLLGFLGKWFILvgsiKIAFSSSLSiyyLVALFAIICTCISAFYYIRIVATIYF 539
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-461 |
5.41e-45 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 163.90 E-value: 5.41e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 106 YPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTT 185
Cdd:PRK08375 108 FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 186 DFAGIYAVAQHGEVsvgLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASA-PKVAAMGLFaRVLHDAFG- 263
Cdd:PRK08375 187 NMADLAGALAENPT---VVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLvTKVAVYALI-RIYFTVFGg 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 264 --HAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTFAF 341
Cdd:PRK08375 263 dfRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 342 ILMMEkDGKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYY 421
Cdd:PRK08375 343 AGAIE-VTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYF 421
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 568230292 422 LRIVYYMYFGEEGEELETNRSPILWGFLMASAAVMLLGII 461
Cdd:PRK08375 422 LRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLL 461
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-460 |
1.04e-38 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 146.84 E-value: 1.04e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 105 EYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGT 184
Cdd:PRK08377 109 KYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 185 TDFAGIYAVAQHGEVSVGLLfGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFgh 264
Cdd:PRK08377 188 LNMAHIAQLAGTIDPTVAQV-GLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQ-- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 265 AVQDWSQVIALL---SLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYM---AIYVSMNIGT 338
Cdd:PRK08377 265 NANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMinhAIVKALLFLA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 339 FAFILMMEKdGKPITDIRALnlySRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGA 418
Cdd:PRK08377 345 VGYVGITLG-GTEIEKFEGL---GKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEA 420
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 568230292 419 FYYLRIVYYMYFGEEGEELETNRSPILWGFLMAsAAVMLLGI 460
Cdd:PRK08377 421 VYYFRLIHTMWFKGEGERIRENAAIGIILLLLA-ALIVVIGI 461
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-460 |
7.12e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 144.85 E-value: 7.12e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 67 MFVDDGFARFAKVAILLSASAVLVMGQDYMSRRGMLRFEYPILVALSAvGMMVMVSAGNLMSLYMGLELQSLALYVVASL 146
Cdd:PRK08376 85 IWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLEL-GMLGMAITGDLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 147 RRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIyAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMW 226
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL-AVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMW 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 227 TPDVYEGAPTPVTAFFASApKVAAMGLFARVLHDAFGHAVQ----DWsqVIALLSLLSMFVGAVAAIGQRDIKRLMAYSS 302
Cdd:PRK08376 243 LPDAYPAAPSSISAMLLVI-KQAGLYALARVLFSIYGPAINlatvGW--VIIILGCLTMFVGVAMAVVQKDVKRLLAYHS 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 303 IAHMGYALMGLAAG-TAYGVQALLVY------MAIYVSMNIGTFAFILMMEKdGKPI--TDIRALNLYS---RREPGKAL 370
Cdd:PRK08376 320 VSQIGYMLLGLGVGlAALGDPAMASYgeialaGGIYHIVNHALYKALLFLTA-GAVIyeTGTRNLNELGglaRTMPKTTI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 371 AMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAwLAIAGVIASVIGAFYYLRIVYYMYFGEEGEELETNRSP---ILWG 447
Cdd:PRK08376 399 AFLIGAAAIVGLPPFNGFASKWLIYESSALFNPI-LGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPpkpMLVP 477
|
410
....*....|...
gi 568230292 448 FLMASAAVMLLGI 460
Cdd:PRK08376 478 MLILAIAIIGMGL 490
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-465 |
1.24e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 141.65 E-value: 1.24e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 94 DYMSRRGMLRFEYPILVALSAvGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLY 173
Cdd:PRK12667 104 WYLEHESGPEWYYTLLLGLEA-GMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFL 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 174 GASLVYGFAGTTDFAGIYA----------VAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFA 243
Cdd:PRK12667 183 ALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLS 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 244 S-APKVAAMGLfARVLHDAFG-----HAVQDW-SQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAG 316
Cdd:PRK12667 263 GlVVNVGAYAI-IRFLYTIFGispslIDFRAAlSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIG 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 317 TAYGVQALLVYM---AIYVSM-NIGTFAFIlmmekDGKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKL 392
Cdd:PRK12667 342 TQLGLAAALFHIinhAIAKSLlFLASGVFI-----HAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKL 416
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568230292 393 YVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYFGE--EGEELETNRSPILWGFLMA-SAAVMLLGIINMFG 465
Cdd:PRK12667 417 LLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKpkSGEEVEHKESPSMSVVILVlALAVLILGILALFL 492
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
178-439 |
6.17e-36 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 139.06 E-value: 6.17e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 178 VYGFAGTTDFAGIYAVAQHGEVSVgLLFGLVFLisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASA-PKVAAMGLFaR 256
Cdd:COG1008 186 FLAGALTFDIAELAAAPLPLTAQL-LLFLAFFI--AFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVlLKMGGYGLL-R 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 257 VLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMaiyVSMNI 336
Cdd:COG1008 262 FALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQM---VSHGL 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 337 GTFAFILMM----EKDGkpITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLaWLAIAGVI 412
Cdd:COG1008 339 ITAALFLLVgvlyDRTH--TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNP-WLAILAAL 415
|
250 260
....*....|....*....|....*..
gi 568230292 413 ASVIGAFYYLRIVYYMYFGEEGEELET 439
Cdd:COG1008 416 GLILTAAYLLWMYQRVFFGPLKEELAE 442
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
76-464 |
4.34e-31 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 126.65 E-value: 4.34e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 76 FAKVAILLSASAVLVMGQDYMSRRGMlrfeYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLrrDSVKSTE 155
Cdd:PRK08668 74 FAMISLLVIFSVAFFMVSEKTKNDAY----FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM--GKKESRK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 156 AGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHgEVSVGLLFGLVFLISGMAF-KVSAVPFHMWTPDVYEGA 234
Cdd:PRK08668 148 ASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLIN-DTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 235 PTPVTAFFASA-PKVAAMGLFARV-------LHDAFG--HAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIA 304
Cdd:PRK08668 227 PQSFSAVLSGQlSKLGAYGFLLVLyvlpgtkLFSEFGtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 305 HMGYALMGLAAGTAYGVQALLVYM---AIYVSMNIGTFAFILMmeKDGKpiTDIRALNLYSRREPGKALAMLILLFSLAG 381
Cdd:PRK08668 307 NGGYILVGLGLGTSLGFAGGLFHVfnhALFKGLFFLIFAAVIY--RTGT--TKISEMGGLIEKMPFTFAMYLVAIISLAG 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 382 VPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGEEL-ETNRSPilwgfLMASAAVMLLGI 460
Cdd:PRK08668 383 IPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSDHkDVKEAP-----LPMLIPMAILVL 457
|
....
gi 568230292 461 INMF 464
Cdd:PRK08668 458 LNVV 461
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
116-461 |
7.34e-31 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 125.65 E-value: 7.34e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 116 GMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQ 195
Cdd:COG1009 123 AMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAP 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 196 HGEVSVGLLFGLVFLISGmAFKVSA-VPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLF--ARvLHDAFGHAvQDWSQV 272
Cdd:COG1009 203 TILSSPLLTLILLLLLLG-AFGKSAqFPLHFWLPDAMEG-PTPVSALLHAATMVKA-GVYllAR-LSPLFALS-PVWLTV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 273 IALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGtAYGV-----------QALLVYMAIYVSMNIGTfaf 341
Cdd:COG1009 278 VAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG-AYVAalfhllthaffKALLFLGAGSVIHATGT--- 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 342 ilmmekdgkpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLA--WLAIAGVIASVIGAF 419
Cdd:COG1009 354 -----------RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLgpLLLAVALLGAFLTAF 422
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 568230292 420 YYLRIVYYMYFGEEGEELETNRSPILWGFLMASAAVMLLGII 461
Cdd:COG1009 423 YSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLV 464
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
103-460 |
1.22e-28 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 118.13 E-value: 1.22e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 103 RFEYPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRdSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFA 182
Cdd:PRK12663 107 RYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQ-EREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 183 GTTDFAGIYAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFhMWTPDVYEGAPTPVTAFFAS-APKVAAMGLFaRVLHDA 261
Cdd:PRK12663 186 GTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAAlLTKVGIYALI-RVFTLL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 262 FGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAiyVSMNIGTFAF 341
Cdd:PRK12663 264 FPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLV--HDMVVKTALF 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 342 IL---MMEKDGKpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGA 418
Cdd:PRK12663 342 LIagsLVRLTGY--RSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITM 419
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 568230292 419 FYYLRIVYYMYFGEE-GEELETNRSPILWGFLMASAAVMLLGI 460
Cdd:PRK12663 420 YSLFRIFFLAYWGDKdGEEVNFKPIPLYRKLPLSILAVVVIAM 462
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
106-426 |
6.49e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 113.91 E-value: 6.49e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 106 YPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALyVVASLRRDSVKSTEAGLKYFVLGALssglllygASLVYGFAGTT 185
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAI-IPLLIKQHHPRKVEATTKYFIIQAT--------ASALLLFGGLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 186 DFAGIYavaQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGHA 265
Cdd:MTH00200 77 NAWTSG---QWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 266 vqdwsqvIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAagtaYGVQALLVYMAIYVSMNIGTFAFILMM 345
Cdd:MTH00200 154 -------LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLV----YSPNLALLYLLLYVIITLTVFLLLNLL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 346 EKdgkpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIV 425
Cdd:MTH00200 223 NS-----TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLS 297
|
.
gi 568230292 426 Y 426
Cdd:MTH00200 298 Y 298
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
182-438 |
5.47e-26 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 110.68 E-value: 5.47e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 182 AGTTDFAGIYAVAQHGEVSVGLLFGLVFlisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASA-PKVAAMGLFaRVLHD 260
Cdd:PRK05846 192 TGTFDIADLLNLPLPPGVQYWLFLAFFI---AFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGIlLKMGAYGLL-RFSLP 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 261 AFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMaiyVSMNIGTFA 340
Cdd:PRK05846 268 LFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQM---ISHGLSSAA 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 341 -FIL---MMEKDGKpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAgLAWLAIAGVIASVI 416
Cdd:PRK05846 345 lFLLvgvLYDRLHT--RDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQV-NPVIAFIATTGLIL 421
|
250 260
....*....|....*....|..
gi 568230292 417 GAFYYLRIVYYMYFGEEGEELE 438
Cdd:PRK05846 422 AAVYSLWLYQRVMFGPVKNEVA 443
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
112-430 |
6.97e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 110.21 E-value: 6.97e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 112 LSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIY 191
Cdd:PRK12662 118 LCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDK-KALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMF 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 192 AVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGHAV----Q 267
Cdd:PRK12662 197 LIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFvfttL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 268 DWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIY------VSMNIGTFAF 341
Cdd:PRK12662 277 PFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHsivksaLFMVSGSISY 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 342 ILMMekdgkpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGlAWLAIAG-VIASVIGAFY 420
Cdd:PRK12662 357 HFGT-------TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSN-AWIGLVVlLVGSGLSVIY 428
|
330
....*....|
gi 568230292 421 YLRIVYYMYF 430
Cdd:PRK12662 429 VWKIVEALYF 438
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
115-426 |
1.18e-24 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 104.63 E-value: 1.18e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 115 VGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYava 194
Cdd:MTH00041 15 LGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSP-RSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL--- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 195 qhgevsvgLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFghavqdwSQVIA 274
Cdd:MTH00041 91 --------NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLN-------SNILI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 275 LLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYalmgLAAGTAYGVQALLVYMAIYVSMNigTFAFILMMEKDGKPITD 354
Cdd:MTH00041 156 LCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGW----IIITSAYSPNASIIMFLIYIIIN--TSIFLIGNNFSLSTLSH 229
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568230292 355 IRALNLYSrrePGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:MTH00041 230 LNKLSQLN---PISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISF 298
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
112-464 |
1.29e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 104.20 E-value: 1.29e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 112 LSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRdSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTtdfagiy 191
Cdd:MTH00144 12 LMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKK-KSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFS------- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 192 avaqhgevsvglLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHdafghaVQDWSQ 271
Cdd:MTH00144 84 ------------WFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLD------LYWLAY 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 272 VIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLaagtAYGVQALLVYMAIYVSMNIGTfaFILMMEKDGKP 351
Cdd:MTH00144 146 LLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAI----LHGSWLMWMYFLIYIVSSGFL--FFSLWSGDSGS 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 352 ITDIRALNLYSRRepgkALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYFG 431
Cdd:MTH00144 220 MKDLGSLKPSYKT----GLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS 295
|
330 340 350
....*....|....*....|....*....|...
gi 568230292 432 eEGEELETNRSPILWGFLMASAAVMLLGIINMF 464
Cdd:MTH00144 296 -SSKSKKSNSSKVLNSSIISLNLLGGLLFLLLY 327
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
124-467 |
2.35e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 105.80 E-value: 2.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 124 GNLMSLYMGLELQSLALYVVASLRRDSVKSTEAgLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGI------YAVAQHG 197
Cdd:PRK07691 128 GDIFNLFVFFEVMLMASYVLIVIGGTKIQLRES-IKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsvkiaeLSAGQTG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 198 EVS-VGLLFGLVFlisgmAFKVSAVPFHMWTPDVYEGAPTPVTAFFASApkVAAMGLFA--RVLHDAFGHAVQDWSQVIA 274
Cdd:PRK07691 207 LITvVAILFLFVF-----ATKAGLFPLYFWLPGSYYAPPIAIAALFGAL--LTKVGVYAiaRTFTLFFSHDTSFTHYLIL 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 275 LLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTFAFILMMEKDGKpITD 354
Cdd:PRK07691 280 ILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITG-TTD 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 355 IRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEG 434
Cdd:PRK07691 359 LKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPK 438
|
330 340 350
....*....|....*....|....*....|...
gi 568230292 435 EELETNRSPILwGFLMASAAVMLLGIINMFGVE 467
Cdd:PRK07691 439 GYDLNNKVPVK-KLLLPAVVLVAITILYGLGAE 470
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
177-432 |
4.06e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 104.64 E-value: 4.06e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 177 LVYGFAGTTDFAGIYAvaQHGEVSVGLLFGLVFLIsGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFAS-APKVAAMGLFa 255
Cdd:TIGR01972 179 LYFLGGGTFDLLELLN--LPLPFGVQTWLFLAFFI-AFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGvLLKMGTYGFL- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 256 RVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMaiyVSMN 335
Cdd:TIGR01972 255 RFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQM---ISHG 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 336 IGTFAFILM--MEKDGKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLaWLAIAGVIA 413
Cdd:TIGR01972 332 LITAALFLLvgVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNP-VVAFLAALG 410
|
250
....*....|....*....
gi 568230292 414 SVIGAFYYLRIVYYMYFGE 432
Cdd:TIGR01972 411 IVLAAAYMLTLYKRVFFGE 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-413 |
1.03e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 103.89 E-value: 1.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 106 YPILVAlsavGMMVMVSAGNLMSLYMGLELQSLALYVVASLRrDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTT 185
Cdd:PRK12665 117 YLILVA----GVSNAFLAGDLFNLYVGFEILLVASYVLLTLG-ATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 186 DFAGIYAVAQHGEVSVGLLFGLVFLIsGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFAsapkvaamGLFARVLHDAF--- 262
Cdd:PRK12665 192 NMADLAVRLDELPSGTRTALFAVLLV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFA--------GLLTKVGVYAIirt 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 263 ------GHAVQDWSQVIALLSllsMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNI 336
Cdd:PRK12665 263 htllfpGGGLDTLLMVVALLT---MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQT 339
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568230292 337 GTFAFILMMEKDGKPiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAG--LAWLAIAGVIA 413
Cdd:PRK12665 340 TLFLVVGLIERQAGS-SSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGtwLAWALVAGGVV 417
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
117-433 |
1.50e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 103.90 E-value: 1.50e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQH 196
Cdd:TIGR01974 127 MLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 197 GEVSVGLLFGLVFLISGMAfKVSAVPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALL 276
Cdd:TIGR01974 207 AFFSALTLICLLLFIGAMG-KSAQLPLHTWLPDAMEG-PTPVSALIHAATMVTA-GVYLVARTSPLFELSPTALYLVTII 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 277 SLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYalMGLAAG-TAYGVQAL-LVYMAIYVS-MNIGTFAFILMMEKDgkpiT 353
Cdd:TIGR01974 284 GAITALFAATVALVQNDIKRILAYSTMSQLGY--MFLALGvGAYAAAIFhLMTHAFFKAlLFLGAGSVIHAMHHE----Q 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 354 DIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLA-IAGVIASVIGAFYYLRIVYYMYFGE 432
Cdd:TIGR01974 358 DIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLfVAGLIGAFLTAFYSFRLIFMVFHGK 437
|
.
gi 568230292 433 E 433
Cdd:TIGR01974 438 E 438
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
71-458 |
1.52e-21 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 98.29 E-value: 1.52e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 71 DGFARFAKVAILLSASAVLVMGQDYMSRR--GMLRFEYPILVALSAvgMMVMVSAGNLMSLYMGLELQSLALYVVASLRR 148
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRkdNLPRFYFYLTLFMFS--MIGIVLSDNTILMYVFWELTSVSSFLLISYWY 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 149 DSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTP 228
Cdd:PRK12646 155 NNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 229 DVYEgAPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGY 308
Cdd:PRK12646 235 RAMA-APTPVSAYLHSATMVKA-GIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGM 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 309 --ALMGLAAGTAYGVQ-------ALLVYMAIYVSMNIGTFAFILMMekdGKPITD-------IRALNLYSRREPGKALAM 372
Cdd:PRK12646 313 imAMVGIGGGYAQHQQdaiasiyVFVLFAALFHLMNHAIFKCALFM---GVGIIDheagtrdIRILSGMRQLFPKMNLVM 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 373 LILLFSLAGVPPMLGFFGKLYVLNAAYQAG---------LAWLAIAGVIASVIGAFYYLRIVYYMYFGEEGEELETNRSP 443
Cdd:PRK12646 390 TIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKKNI 469
|
410
....*....|....*.
gi 568230292 444 -ILWGFLMASAAVMLL 458
Cdd:PRK12646 470 hEPWLFSLPSLILMVL 485
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
114-428 |
3.26e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 94.50 E-value: 3.26e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 114 AVGMMVMVSAGNLMSLYMGLELQSLALYVVASlRRDSVKSTEAGLKYFVLGALssglllygASLVYGFAGTTD--FAGIY 191
Cdd:MTH00112 14 ILGTIITISSNHWLMAWTGLEINTLAIIPLIS-KPHHPRATEAATKYFLTQAA--------ASALILFSSTTNawNTGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 192 AVAQHGEVSVGLLfglvfLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFArVLHDAFGHAVqdwsq 271
Cdd:MTH00112 85 DITQLTNPTSCTL-----LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL-MTSNSLNPTL----- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 272 vIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLaagtAYGVQALLVYMAIYVSMNIGTFAFILMMEKdgKP 351
Cdd:MTH00112 154 -LLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAII----TYSPKLTLLTFYIYILMTTPMFLTLNTTST--KT 226
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568230292 352 ITDIRALNLYSrrePGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYM 428
Cdd:MTH00112 227 LKDMMTSWTKS---PTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYIS 300
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
71-425 |
2.67e-20 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 94.34 E-value: 2.67e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 71 DGFARFAKVAILLSASAVLVMGQDYMSRRGMLRFEYPILVALSAvGMMVMVSAGNLMSLYMGLELQSLALYVvasLRRDS 150
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMA-AMLLLVLADDVVVLFVAWELVSLASFF---LIARS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 151 VKSTEAG-LKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQHGEVSvGLLFGLVFLISGMAFKVSA-VPFHMWTP 228
Cdd:PRK12650 154 GSGGEAGsIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKP-GLTTVVAVLIAVAAFTKSAqFPFHFWLP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 229 DVYeGAPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGY 308
Cdd:PRK12650 233 EAM-AAITPVSAFLHAAAVVKA-GIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGW 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 309 ALMGLAAGTAYGVQALLVYMAIYVSMNIGTFAFILMMEKDGKPiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGF 388
Cdd:PRK12650 311 IVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 568230292 389 FGKLYVLNAAYQA-GLAWLAIAGVIASVIGAF----YYLRIV 425
Cdd:PRK12650 390 VSKEGMLTAFLEApGGNAGVVLLLVGAALGAVftfaYSARLV 431
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
87-435 |
3.26e-20 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 93.93 E-value: 3.26e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 87 AVLVM--GQDYMSR-RGMLRFeYPILvALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVL 163
Cdd:PRK07376 104 ALLVMiySDGYMAHdPGYVRF-FAYL-SLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVV 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 164 GALSSGLLLYGASLVYGFAGTTDFAGI----YAVAQHGEVSVGL--LFGLVFLISGMAfKVSAVPFHMWTPDVYEGaPTP 237
Cdd:PRK07376 182 NRVGDFGLLLGILGLFWATGSFDFDGIadrlSELVSSGAVSGWLalLLCILVFLGPMA-KSAQFPLHVWLPDAMEG-PTP 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 238 VTAFFASAPKVAAmGLF--ARvLHDAFGH--AVQDwsqVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGL 313
Cdd:PRK07376 260 ISALIHAATMVAA-GVFlvAR-MYPVFEQfpAVMT---VIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAM 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 314 AAGtAYGVQAL-LVYMAIYVSM-NIGTFAFILMMEK--DGKPI--TDIRALNLYSRREPGKALAMLILLFSLAGVPPMLG 387
Cdd:PRK07376 335 GCG-AYSAGLFhLMTHAYFKAMlFLGSGSVIHGMEEvvGHDPVlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAG 413
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 568230292 388 FFGKLYVLNAAYQAGLAwLAIAGVIASVIGAFYYLRIvYYMYFgeEGE 435
Cdd:PRK07376 414 FWSKDEILGAAFEANPA-LWFVGFLTAGMTAFYMFRM-YFLTF--EGE 457
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
117-461 |
5.77e-20 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 92.34 E-value: 5.77e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLygASLVYGFAGTTDFAgIYAVAQH 196
Cdd:PRK06525 126 MAGLVYSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLY--LAAATLFLQTGTFA-LSALSGL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 197 GEVSVGLLFGLVFLisgMAFKVSA-VPFHMWTPDVYEgAPTPVTAFFASAPKVAaMG--LFARVLHDAfGHAVQDWSQVI 273
Cdd:PRK06525 202 HGSLKYLVFLGILF---AAWGKSAqLPFYSWLPDAME-APTPASAYLHAASMVK-VGvyIFARAIQSM-GPIPHVIGYVG 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 274 ALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAA---GTAYGVQALLVYMAIY------VSMNIGTFAFILm 344
Cdd:PRK06525 276 AVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLailGSRLALEGSIAYIFNHafakslFFLVAGALSYSC- 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 345 mekdgkPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLA-----IAGVIASVIGAF 419
Cdd:PRK06525 355 ------GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIllpamVLLLIESVASFA 428
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 568230292 420 YYLRIVYYMYFGEEGEELEtNRSPILWGFLMASAAVMLLGII 461
Cdd:PRK06525 429 WFLRWFGRVVFGEPSEAVA-DAAPLPGSMKLVLIVLIVMSLV 469
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-439 |
7.02e-20 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 93.06 E-value: 7.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 116 GMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVaq 195
Cdd:PRK12647 107 SMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLAS-- 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 196 hGEVSVG--LLFGLVFLISGMAFKVSA-VPFHMWTPDVYEgAPTPVTAFFASAPKV-AAMGLFARvLHDAFGHAvQDWSQ 271
Cdd:PRK12647 185 -GDVIREhpLYLAILLLVLGGAFTKSAqFPFHFWLPNAME-APTPVSAYLHSATMVkAGIYLLAR-LNPVLGGT-PLWQT 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 272 VIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYvSMNIGTF---AFILMMEKD 348
Cdd:PRK12647 261 ILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAH-SLYKGALfmvAGIIDHETG 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 349 GKPITDIRALNlysRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLA--WLAIAGVIASVIGAFYYLRIVY 426
Cdd:PRK12647 340 TRDITKLGGLR---RAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWslILTVAAVLGNALMVAVAFLVGI 416
|
330
....*....|...
gi 568230292 427 YMYFGEEGEELET 439
Cdd:PRK12647 417 KPFLGKLVETPKH 429
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
115-465 |
7.87e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 90.27 E-value: 7.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 115 VGMMVMVSAGNLMSLYMGLELQSLALYVVASLRrDSVKSTEAGLKYFvlgalssglllygasLVYGFAGTTDFAGIYAVA 194
Cdd:MTH00160 16 MGTLISISSNSWFGAWMGLEINLLSFIPLISNK-KNLMSSESSLKYF---------------LIQALASIILLFSIILNM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 195 QHGEVSVGLLFglVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHdafghavqdwSQVIA 274
Cdd:MTH00160 80 LNLMLFNNISS--MLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN----------NNFII 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 275 LLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLaagtAYGVQALLVYMAIYVSMNIgtFAFILMMEKDGKPITD 354
Cdd:MTH00160 148 IIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSM----MISENLWLIYFLIYSIISL--SIILLFNKFNIFFLNQ 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 355 IRALNLYSrrePGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYMYFGEEG 434
Cdd:MTH00160 222 LFNSNNKS---KKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYN 298
|
330 340 350
....*....|....*....|....*....|.
gi 568230292 435 EELETNRSPILWGFLMasaaVMLLGIINMFG 465
Cdd:MTH00160 299 KNKWNLKKKKNKFSLI----LNFLSFISLFG 325
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-426 |
1.07e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 91.55 E-value: 1.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 82 LLSASAVLVMGQDYMSRRGMLRFEYPILVALSAVGMMVMVSAgNLMSLYMGLELQSLALY-VVASLRRDsvKSTEAGLKY 160
Cdd:PRK07234 73 ILTNALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCA-DLISLYVALEVLSIATFlLVAYPRTD--RAIWVGLRY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 161 FVLGALSSGLLLYGASLVYGFAGTTDFAGIyavaqhgEVSVGLLFGLVFLisGMAFKVSAVPFHMWTPDVYEGAPTPVTA 240
Cdd:PRK07234 150 LFYSNVAMLFYLIGAVLVYQANGTFAFSGL-------ATADPEAFALIAL--GLLVKGGIFVSGLWLPLTHSEAEPPVSA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 241 FFASAP-KVAAMGLfARVLHDAFGHAvqdwsQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAY 319
Cdd:PRK07234 221 LLSGVVvKAGVFPL-VRCALDVPGLD-----LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLY 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 320 GVQALLVYMAIYVsmnigtFAFILMMEKDGKPITDIRALnlysrrepGKALAMLILLFSLAGVPPMLGFFGKLYVLnaay 399
Cdd:PRK07234 295 ALAHGLVKSTLFL------CAGALPSRNFTELISQMLGI--------GKWIPLTMASFSIAGFPLLAGFVSKVLTL---- 356
|
330 340
....*....|....*....|....*..
gi 568230292 400 QAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:PRK07234 357 KNLLPWQAIALNLAAVGTAASFWKFIF 383
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
30-438 |
8.12e-19 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 88.94 E-value: 8.12e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 30 GKDKLAPALIWLMAGLMSALAIwIGT------GASGSREAFNG--MFVDDGFARFAKVAILLSASAVLVMGQDYMSRRGM 101
Cdd:PRK06277 23 GKDKLIKYLTFIVAILLPILPF-LASygyyyfGGHGLVNGYHSgiTYLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 102 lrFEYPILVALSAVGMMVMvsAGNLMSLYMGLELQSLAL--YVVASLRRDSVKSteaGLKYFVLGALSSGLLLYGASLVY 179
Cdd:PRK06277 102 --YVFLMLMGLASVSAIVL--ADDIFNLYVFFEIAAIVQvgLVIASGTEEAYKA---ALKYMILGNVAGSILLLGIGFLL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 180 GFAGTTDFAGIYAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPK---VAAMGLFAR 256
Cdd:PRK06277 175 ASTGTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKfvlVALMLVIFK 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 257 VLHDAFGHAVQDWsqVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALL---VYMAIYVS 333
Cdd:PRK06277 255 LFGGLSYFPSAQG--VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIfhaINHVIYKS 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 334 MNIGTFAFILMMEKDGkpitDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIA 413
Cdd:PRK06277 333 ALFLGAGIVSYRTKTS----NLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIV 408
|
410 420
....*....|....*....|....*
gi 568230292 414 SVIGAFYYLRIVYYMYFGEEGEELE 438
Cdd:PRK06277 409 SIGTFVSMMKAFYLIYLKPKPEELE 433
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
108-428 |
1.27e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 83.82 E-value: 1.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 108 ILVALSAVGMMVMVSAGNLMSlYMGLELQSLALYVVASlRRDSVKSTEAGLKYFVLGALssglllygASLVYGFAGTTD- 186
Cdd:MTH00070 9 LLSSLALGTMITLSSNHWFLA-WMGLEINTLAIIPLMT-KTHHPRATEAATKYFLTQAS--------ASALILFSSTINa 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 187 -FAGIYAVaqhgeVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHdafgha 265
Cdd:MTH00070 79 wFTGEWTI-----MNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISH------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 266 vQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMnigtfaFILMM 345
Cdd:MTH00070 148 -LLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSM------FLMLM 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 346 EKDGkpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIV 425
Cdd:MTH00070 221 NLNS---TNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLS 297
|
...
gi 568230292 426 YYM 428
Cdd:MTH00070 298 YAM 300
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
108-426 |
1.36e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 83.57 E-value: 1.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 108 ILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRdSVKSTEAGLKYFVLGALSSGLLLYGASLVYGfagttdf 187
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNK-SITENEGAMKYFLFQEFGSALLLMGGSLSFS------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 188 agiyavaqhgEVSVGLLFGLVFlISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGhavq 267
Cdd:MTH00197 74 ----------NLYLSLLSVVLV-ILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMG---- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 268 dwsqvIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAagtaYGVQALLVYMAIYVSMNIGTFaFILMMEK 347
Cdd:MTH00197 139 -----LLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLV----YSPSIFMLYYLIYFVIMFMLF-LFLSKNN 208
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568230292 348 DGKPITDIRALNLYSRREPGKALAMLillfSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:MTH00197 209 LSSLNQQYSNPESMSSNLVFLGLSFL----SLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
117-435 |
1.55e-17 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 85.21 E-value: 1.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYA-VAQ 195
Cdd:PRK06590 128 MLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAaAPQ 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 196 HGEVSVGLLFGLVFLISGMAFKVSA-VPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLF--ARvLHDAFgHAVQDWSQV 272
Cdd:PRK06590 208 FFGLGWSALTLICLLLFIGAMGKSAqFPLHTWLPDAMEG-PTPVSALIHAATMVTA-GVYlvAR-MSPLF-ELSPEALLF 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 273 IALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYalMGLAAGT-AYGVqallvymAIYVSMnigTFAF---------- 341
Cdd:PRK06590 284 VAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGY--MFLALGVgAYAA-------AIFHLM---THAFfkallflgag 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 342 --ILMMEKDgkpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAF 419
Cdd:PRK06590 352 svIHAMHHE----QDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAFLTAF 427
|
330
....*....|....*.
gi 568230292 420 YYLRIVYYMYFGEEGE 435
Cdd:PRK06590 428 YSFRLIFLVFHGKEKE 443
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-466 |
4.77e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 83.33 E-value: 4.77e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 118 MVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVkSTEAGLKYF-VLGALSSGLLLYGASLVYGFAGTTDFA--GIYAVA 194
Cdd:PRK06589 130 VLIALSSDLFTMFVCYELLTISTAFLIGHTRNNI-SLSGGYKYLkILMISALLLFLPAVILIYTKTGNLDFVsgGLFSKN 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 195 QHGEVSVGLLFGLVflisgmafKVSAVPFHMWTPDVYEgAPTPVTAFFaSAPKVAAMGLFA--RVLHDAFG----HAVQD 268
Cdd:PRK06589 209 QSIILLLMFIYGIA--------KTAIFPVHSWLPAAMV-AHYPVSALL-HAVIVVKTGLFCiyKILLYIFGlsylQRIFA 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 269 WSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTFaFILMMEKD 348
Cdd:PRK06589 279 EFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLF-YSMGSIYS 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 349 GKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAI----AGVIASVIGAFYYLRI 424
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIivmlVVIASSILSALYLLKI 437
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 568230292 425 VYYMYFGEEGEELETNRSPIlwgFLMASAAVMLLGIINMFGV 466
Cdd:PRK06589 438 LSSIYKPSLSENSFITKSLP---YLMQISVITCCCALTLFYF 476
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
109-401 |
9.47e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 82.86 E-value: 9.47e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 109 LVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFA 188
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 189 giyaVAQHGEVSVGLLFGLVFLisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGLFaRVLHDAFGHAVQ 267
Cdd:PRK08667 196 ----PLGASAGILSLVFLLLFL--GFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMlKVAVYGLV-RFLMDVLSPELW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 268 dWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQAL--LVYMAI----YVSMNIGTFAF 341
Cdd:PRK08667 269 -WGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLdtLALLALggalFHSLNHALFKS 347
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568230292 342 ILMMEKDGKPIT----DIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQA 401
Cdd:PRK08667 348 LLFLTAGSVVHAtgtrNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQS 411
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
45-460 |
9.72e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 82.29 E-value: 9.72e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 45 LMSALAIWIGTGASGSREAFNGMFVDDGFARFAKVAILLSASAVLVMGQDYM--------SRRGMLRFeYPILVALSAVG 116
Cdd:PRK06458 42 LILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevehgeLSPVTLRL-YYGMYQLFLFT 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRdSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYA---- 192
Cdd:PRK06458 121 MLLALTSNNLGLMWVAIEATTLSSALLVGIYR-TRASLEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAilwt 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 193 -VAQHGEVSVGLLFGL--VFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGHAVQDW 269
Cdd:PRK06458 200 eLLKHASLLDPTLMKLafVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDF 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 270 SQVIAL-LSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTF--AFILMME 346
Cdd:PRK06458 280 PGRLLLiFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFfaSGNVLQK 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 347 KDGKPITDIRALnlySRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:PRK06458 360 YGTRDINVIRGL---LKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
|
410 420 430
....*....|....*....|....*....|....*.
gi 568230292 427 YMYFGEEGEELETNRSPILWGFLMA--SAAVMLLGI 460
Cdd:PRK06458 437 GMVFGEPPEAVNRGDLGWLTTSPMFvhLVLVLVLGL 472
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
103-461 |
1.64e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 81.67 E-value: 1.64e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 103 RFEYPILVALSAvGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFA 182
Cdd:PRK06473 107 RFYYSLLLLLNA-GVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 183 GTTDFAGIYAVAQHGEVSVGLLFgLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGLFaRVLHDA 261
Cdd:PRK06473 185 GASSFDYEPLRSHTLPLSTQLLL-LAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLlKLGTYGLL-RFGVGL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 262 FGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMaiyVSMN-IGTFA 340
Cdd:PRK06473 263 FPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQM---ISHGlISALL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 341 FIL---MMEKDG-KPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAgLAWLAIAGVIASVI 416
Cdd:PRK06473 340 FLLvgvVYKKTGsRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPI-FPVQTLLCMIGTGL 418
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568230292 417 GAFYYLRIVYYMYFGEEGEELeTNRSPILWGFLMASAAVMLLGII 461
Cdd:PRK06473 419 TAVYFLLLVNRVFFGRLTAEL-SNLPRVLWSERLPALVLAVLIVV 462
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
117-432 |
4.61e-16 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 81.12 E-value: 4.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQH 196
Cdd:PRK12645 123 MLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 197 GEVSVGLLFGLVFLISGmAFKVSA-VPFHMWTPDVYEgAPTPVTAFFASAPKV-AAMGLFARvLHDAFGhAVQDWSQVIA 274
Cdd:PRK12645 203 IQNSPLFIPAMILILLG-AFTKSAqFPFYIWLPDAME-APTPVSAYLHSATMVkAGIYLVAR-FTPIFA-GSQVWFWTVT 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 275 LLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMG--YALMGL-AAGTAYGVQALLVYM-----AIYVSMNIGTFAFILMME 346
Cdd:PRK12645 279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGliMSLLGIgAASLHYQGDDSKIYAaaitaAIFHLINHATFKGSLFMI 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 347 K---DGKPIT-DIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGK-------LYVLNAAYQAGLAW---LAIAGVI 412
Cdd:PRK12645 359 VgivDHETGTrDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKemffesmLNATEANLFSLDTWgvlFPVIAWV 438
|
330 340
....*....|....*....|
gi 568230292 413 ASVIGAFYYLRIVYYMYFGE 432
Cdd:PRK12645 439 ASVFTFVYSIIFIFKTFFGK 458
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
116-426 |
8.00e-16 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 78.28 E-value: 8.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 116 GMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFagttdfagiYAVAQ 195
Cdd:MTH00011 18 GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMN-QESEAAVKYFLAQALGSGLLLLGMTMMWSF---------PSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 196 HgevsvgllFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHdafghavQDWSQVIAL 275
Cdd:MTH00011 88 N--------ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTS-------HNILPMMTS 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 276 LSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIgTFAFILMMEKdgkpitdi 355
Cdd:MTH00011 153 MAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLML-LFAYLNAFST-------- 223
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568230292 356 RALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:MTH00011 224 KFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF 294
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
117-426 |
2.10e-15 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 78.58 E-value: 2.10e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQH 196
Cdd:MTH00020 124 MVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVS 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 197 GEvSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALL 276
Cdd:MTH00020 204 AP-SSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLLIRSSPLFEQAPLALIIVTIV 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 277 SLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYalMGLAAGTAYgvqallVYMAIYVSMNIGTFAFILMMEKdGKPI---- 352
Cdd:MTH00020 281 GSLTVFFAATVGLVQNDLKKVIAYSTCSQLGY--MVVACGLSH------YSISLFHLMNHAFFKALLFLSA-GSVIhals 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568230292 353 --TDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAY-QAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:MTH00020 352 deQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFgQYYLIFAYWLGCFSALLTAFYSIRLIY 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-466 |
4.82e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 77.95 E-value: 4.82e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 79 VAILLSASAVLVMG--QDYMSRRGMLRFEYPILVaLSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEA 156
Cdd:PRK12649 85 IGLIASGIGVIIMSysNGYMSHKEDLPRYYQYLL-LFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYG 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 157 GLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIY---AVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEg 233
Cdd:PRK12649 164 ATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILqdsELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME- 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 234 APTPVTAFFASAPKV-AAMGLFARVlHDAFGhAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYaLMG 312
Cdd:PRK12649 243 APTPVSAFLHSATMVkAGVYLVARI-HPIFS-GTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAY-LMT 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 313 LAAGTAYGVQALLVYMAIYVSMNIGTFAFILMM----EKDGKPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGF 388
Cdd:PRK12649 320 MYGYTTYHEPGLGVAAATFHLLNHATFKACLFLvagiVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGF 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 389 FGKLYVLNAAYQAGLA----WLAIAGVIASVIGAF---YYLRIVYYMYFGEEGEEL---ETNRSPilwgFLMASAAVMLL 458
Cdd:PRK12649 400 LSKEMFYETSVEMGALiggpFTIIIPAVAVLGGVFtfaYSIKLIDGIFLGERTHDHlphHIHEAP----YVMLIPAAFLA 475
|
....*...
gi 568230292 459 GIINMFGV 466
Cdd:PRK12649 476 GLVILFGL 483
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
106-431 |
1.33e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 75.90 E-value: 1.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 106 YPILVALSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRrDSVKSTEAGLKYFVLGALSsglllyGASLVYGFAGTT 185
Cdd:PRK07363 109 YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW-GGEKRGYASIKFLIYTAVS------GLLVLAAFLGIV 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 186 DFAGIYAVAQHGEVSVGLLFG-----LVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASA-PKVAAMGLfarvLH 259
Cdd:PRK07363 182 WLSGSTSFDYDAISTQNLSLNtqlilLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVlAKLGTYGL----LR 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 260 DAFGHAVQDWSQV---IALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGV-------------QA 323
Cdd:PRK07363 258 FGLQLFPQTWSLVapgLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLlgavaqmishgliLA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 324 LLVYMAIYVSMNIGTFAfilmMEKDGKPITDIRALNLYSrrepgkalAMLILL-FSLAGVPPMLGFFGKLYVLNAAYQAg 402
Cdd:PRK07363 338 LLFHLVGIVERKVGTRD----LDVLNGLMNPIRGLPLTS--------ALLVLAgMASAGIPGLVGFVAEFIVFQGSFST- 404
|
330 340
....*....|....*....|....*....
gi 568230292 403 LAWLAIAGVIASVIGAFYYLRIVYYMYFG 431
Cdd:PRK07363 405 FPIPTLLCIVASGLTAVYFVILLNRTCFG 433
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
100-388 |
4.00e-14 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 74.92 E-value: 4.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 100 GMLRFEYPILVAlsavGMMVMVSAGNLMSLYMGLELQSLALY--VVASLRRDSVKSteAGLKYFVLGALSSGLLLYGASL 177
Cdd:PRK06521 113 GAMGFFYNLFLA----SMVLVLLADDAFSFLVAWETMSLSSWflVIANHREAEIRR--AGFLYLLMAHAGALAILLAFGL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 178 VYGFAGTTDFAGIYAvAQHGEVSVGLLFGLVFLISGMafKVSAVPFHMWTPDVYEGAPTPVTAFFASA-PKVAAMGlFAR 256
Cdd:PRK06521 187 LARESGSYDFAAMRA-AHLSPFWASLVFLLALFGFGA--KAGLVPLHVWLPRAHPAAPSHVSALMSGVmLKVAIYG-ILR 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 257 VLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLA---AGTAYGVQALLVY---MAI 330
Cdd:PRK06521 263 VVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGlamVFIAYGMPLLAALaltAAL 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568230292 331 YVSMNIGTFAFILM--------------MEKDGKPItdiralnlysRREPGKALAMLILLFSLAGVPPMLGF 388
Cdd:PRK06521 343 YHLLNHALFKSLLFlgagavlhatgtrdMEKLGGLI----------RRMPWTAWAFLIGCLAISALPPLNGF 404
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
182-461 |
5.03e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 74.58 E-value: 5.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 182 AGTTDFAGIYAVAQHGevsVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEgAPTPVTAFFASAPKV-AAMGLFARvLHD 260
Cdd:PRK12644 184 AGTYRLSELLADPPTG---PAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVkAGIYLVAR-LAP 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 261 AFGHaVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAygvQALLVYMAIYVSMniGTFA 340
Cdd:PRK12644 259 GFAD-VPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTR---DAALAGLAMLLAH--ALFK 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 341 FILMMEK---DGKPIT-DIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGK----LYVLNAAYQAGLAWLAIAG-V 411
Cdd:PRK12644 333 AALFLVVgiiDHSTGTrDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGiV 412
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 568230292 412 IASVIGAFYYLRIVYYMYFGEEGEEL---ETNRSPILWGFLMASAAVMLLGII 461
Cdd:PRK12644 413 LGSILTVAYSLRFLWGAFARKPGAFPsvaVTEMHRPSPLFLAPPAVLAVLGLV 465
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
174-414 |
9.21e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 73.35 E-value: 9.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 174 GASLVYGFAGTTDFAGI------YAVAQHGEVSVG-LLFGLVFLIsgmafKVSAVPFHMWTPDVYEGAPTPVTAFFASAP 246
Cdd:PRK12666 178 GVGLIYGVTGTLNMADLaqriaqLPAADRALLEAGaALLLVVFLI-----KAAMWPLNFWLPPAYAAASAPVAALFAIMT 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 247 KV---AAMGLFARVLHDAFG---HAVQDWSQVIALLSLLsmfVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYG 320
Cdd:PRK12666 253 KVgiyAILRLSTLLFGPEAGasaGFGQDWLLPGGLATLA---FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAA 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 321 VQALLVYMaiyVSMNIGTFAFILMME---------KDGKPIT-----DIRALNLYSRREPGKALAMLILLF-----SLAG 381
Cdd:PRK12666 330 TAAALYYL---VHSTLAAAALFLLADlverqrgaaADRLAVTpelydLDEEEEEEVGVAIPATMALLGLLFficalALAG 406
|
250 260 270
....*....|....*....|....*....|....*.
gi 568230292 382 VPPMLGFFGKLYVLNAA---YQAGLAWLAIAGVIAS 414
Cdd:PRK12666 407 LPPLSGFLGKFALLQALlnpPGAGAAWWLWALVLLS 442
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
210-437 |
1.80e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 72.91 E-value: 1.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 210 LISGMAFKVSA-VPFHMWTPDVYeGAPTPVTAFFASAPKVAAmGLF--ARvLHDAFGHAvQDWSQVIALLSLLSMFVGAV 286
Cdd:PRK12648 212 LILLGAFTKSAqFPFHFWLPHAM-AAPTPVSAYLHSATMVKA-GVFllAR-LWPVLAGT-EEWFWIVGGAGLITLLLGAY 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 287 AAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQAllvymAIYVSMNIGTFAFILMMEK---DGKPIT-DIRALNLYS 362
Cdd:PRK12648 288 FALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVA-----AIFHIINHATFKASLFMAAgiiDHETGTrDMRRLSGLR 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 363 RREPGKALAMLILLFSLAGVPPMLGFFGK-LYVLNAAYQAGLAWLAIA-GVIASVIGAF---YYLRIVYYMYFGEEGEEL 437
Cdd:PRK12648 363 RLMPITATLAMVAAAAMAGVPLLNGFLSKeMFFAETLDTHLLGSLDWLlPVAATLAGAFsvaYSLRFIHDVFFGPPPDDL 442
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
117-399 |
4.83e-13 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 71.53 E-value: 4.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDF--------- 187
Cdd:MTH00032 124 MMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvg 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 188 AGIYAVAQHGEVSVG------LLFGLVFLIsGMAFKVSAVPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLFARVLHDA 261
Cdd:MTH00032 204 SGIMDRGYYGGGAYEsplapfAIIGILLLI-GCIGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLMIRSFP 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 262 FGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALM--GLAAGTAYGVQALLVYMAIYVSMNIGTF 339
Cdd:MTH00032 281 LFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLiiGIEGSHNVGLFHLVNHAFFKALLFLSAG 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 340 AFILMMEKDGKpitDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAY 399
Cdd:MTH00032 361 SVIHSTTVDEQ---DMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTY 417
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
178-431 |
1.81e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 69.31 E-value: 1.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 178 VYGFAGTTDFAGIYAVAQHGEVSVgLLFGLVFLisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGlFAR 256
Cdd:MTH00217 183 LYSYAGTTDYQALCCLKIEKELQY-FIFLGFFL--SLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLlKLGGYG-FIR 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 257 VLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNI 336
Cdd:MTH00217 259 FSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 337 GTF-AFILMMEKDGKPItdIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLawlaIAGVIAS- 414
Cdd:MTH00217 339 ALFiAVTFLYERHHTRL--IKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSY----IVGVLASl 412
|
250 260
....*....|....*....|....*...
gi 568230292 415 --VIGAFY----YLRIVY-----YMYFG 431
Cdd:MTH00217 413 gmVLSAGYsiylYNRVCFgapskYLYFS 440
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
210-428 |
2.89e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 67.91 E-value: 2.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 210 LISGMAFKVSAVPFHMWTPDVYEGApTPVTAFFAS-----APkvaamglFARVLHDAFGHavqdwSQVIALLSLLSMFVG 284
Cdd:MTH00135 98 ITLALALKIGLAPLHFWLPEVLQGL-DLTTGLILStwqklAP-------FALILQIAPTN-----PTLLITLGLTSTLVG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 285 AVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMaiyvsmnIGTFAFILMMEKDGKpiTDIRALNLYSRR 364
Cdd:MTH00135 165 GWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYI-------IMTSSAFLTFKLNSS--TKINTLATSWTK 235
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568230292 365 EPG-KALAMLILLfSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVYYM 428
Cdd:MTH00135 236 APAlTALTPLILL-SLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAM 299
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-395 |
6.69e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.47 E-value: 6.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 203 LLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASApkVAAMGLFARVLHDAFGHAVQDWSQVIALLSLLSMF 282
Cdd:PRK08676 205 LGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGT--VLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIF 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 283 VGAVAAIG---QRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNIGTFAFILMMEKDGKPITDIRALN 359
Cdd:PRK08676 283 SIAVAAFSmlsQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFD 362
|
170 180 190
....*....|....*....|....*....|....*.
gi 568230292 360 LYsRREPGKALAMLILLFSLAGVPPMLGFFGKLYVL 395
Cdd:PRK08676 363 VF-RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
178-461 |
1.12e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 66.63 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 178 VYGFAGTTDFAGIYAVAQHGEVSVGLLFGlVFLisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGlFAR 256
Cdd:MTH00204 186 LYSITGTTDYQILLNIKLPLSIQKWLLVG-FFL--SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILlKLGGYG-FLR 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 257 VLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAI--YVSM 334
Cdd:MTH00204 262 FSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAhgFVSS 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 335 NIGTFAFILMMEKDGKPITDIRALNLYSrrePGKALAMLILLFSLAGVPPMLGFFGKLYVLNAA--YQAGLAWLAIAGVi 412
Cdd:MTH00204 342 ALFIAVTFLYERHHTRLIKYYRGLTLTM---PLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAfeYSLGLGVLVTSGM- 417
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 568230292 413 asVIGAFYYLRIVYYMYFGEEGEELETNRSPI---LWGFLMASAAVMLLGII 461
Cdd:MTH00204 418 --VWSAAYSLYLYNRISFGGGSNYLLFSRDLNrreLLAILPLIIAIFLLGIV 467
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
214-426 |
2.02e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 65.25 E-value: 2.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 214 MAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGHavqdwsqVIALLSLLSMFVGAVAAIGQRD 293
Cdd:MTH00105 102 LAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPN-------LLLTLAILSILIGGWGGLNQTQ 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 294 IKRLMAYSSIAHMGYalmgLAAGTAYGVQALLVYMAIYVSMNIGTFaFILMMekdgKPITDIRALNLYSRREPGKALAML 373
Cdd:MTH00105 175 LRKILAYSSIAHMGW----MTAILPYNPTLTLLNLLIYIIMTLTMF-MLLML----NSSTTTLSLSHTWNKTPLMTSLIL 245
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 568230292 374 ILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLRIVY 426
Cdd:MTH00105 246 LTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIY 298
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
177-409 |
1.39e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 63.31 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 177 LVYGFAGTTDFAGIYAVAQHGEVSVGL-LFGLVflisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASApkVAAMGLFA 255
Cdd:PRK08042 156 LLWQRYGTLDLRLLDMRMQQLPLGSDIwLLGVI----GFGLLAGIIPLHGWVPQAHANASAPAAALFSTV--VMKIGLLG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 256 RVLHDAFGHAVQDWSQVIAL-LSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAA---GTAYGVQALLVYMAI- 330
Cdd:PRK08042 230 ILTLSLLGGNAPLWWGVALLvLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAgvtGIALEQPALIALGLVg 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 331 --YVSMNIGTFAFILMMEKDG----KPITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLA 404
Cdd:PRK08042 310 glYHLLNHSLFKSVLFLGAGSvwfrTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNS 389
|
....*
gi 568230292 405 WLAIA 409
Cdd:PRK08042 390 GAFVA 394
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
200-328 |
2.75e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 62.36 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 200 SVGLLFGLVFLIsGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASApkVAAMGLFA--RVLHDAFGHAVQDWSQVIALLS 277
Cdd:PRK12561 182 ALELLLYAGFLI-AFGVKLPIFPLHTWLPDAHGEASAPVSMILAGV--LLKMGGYAliRFNVQMLPDAHVYFAPALAILG 258
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 568230292 278 LLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYM 328
Cdd:PRK12561 259 VVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQM 309
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
200-431 |
9.62e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 60.74 E-value: 9.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 200 SVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALLSLL 279
Cdd:MTH00211 200 NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEG-PTPVSALLHSSTMVVA-GVFLLIRLSPLFQNNQLILGAVLLLGAL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 280 SMFVGAVAAIGQRDIKRLMAYSSIAHMGyaLMGLAAGTAYGVQALLvymaiyvsmNIGTFAFILMME--------KDGKP 351
Cdd:MTH00211 278 TMLFGALCALTQNDIKKIVAFSTTSQLG--LMMVTLGLNQPQLAFL---------HICTHAFFKAMLfmcsgsiiHGLNN 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 352 ITDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGL-AWLAIAGVIASVIGAFYYLRIVYYMYF 430
Cdd:MTH00211 347 EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLnAWALLLTLLATSLTAAYSFRLIFLSLG 426
|
.
gi 568230292 431 G 431
Cdd:MTH00211 427 G 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
175-441 |
1.13e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 60.49 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 175 ASLVYGFAG-TTDFAGIYAVAQHGEVSVGLLFGLVFLISgMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASApkVAAMGL 253
Cdd:PRK02546 184 AALAMAFYGdTPTFDMTALAAKDFGLGFQLLCYAGLLIA-YGVKLPIVPLHTWLPDAHGEATAPVHMLLAGI--LLKMGG 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 254 FARVLHDA--FGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMaiy 331
Cdd:PRK02546 261 YALLRMNAgmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQM--- 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 332 VSMN-IGTFAFILMmekdGKPITDIRALNLYSRREPGKALAMLILLF------SLAgVPPMLGFFGKLYVL--------- 395
Cdd:PRK02546 338 ISHGlIGASLFFLV----GATYDRTHTLMLDEMGGVGQKMRKMFAMWtacslaSLA-LPGMSGFVAELMVFvgfatsday 412
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 568230292 396 NAAYQAGLAWLAIAGVIASVIgafYYLRIVYYMYFGEEGEELETNR 441
Cdd:PRK02546 413 TLPFRVVVVFLAAVGVILTPI---YLLSMLREIFFGPENKELVSHE 455
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
222-316 |
2.18e-09 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 59.91 E-value: 2.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 222 PFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLF--ARVLH--DAFGHAVQdwsqVIALLSLLSMFVGAVAAIGQRDIKRL 297
Cdd:CHL00025 245 PLHVWLPDAMEG-PTPISALIHAATMVAA-GIFlvARLLPlfIVIPYIMN----LISLIGIITALLGATLALAQKDIKRG 318
|
90
....*....|....*....
gi 568230292 298 MAYSSIAHMGYALMGLAAG 316
Cdd:CHL00025 319 LAYSTMSQLGYMMLALGIG 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
121-460 |
2.22e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 59.52 E-value: 2.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 121 VSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIyavaqhgEVS 200
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLVWARGTK-AAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAI-------AGL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 201 VGLLFGLVFLisGMAFKVSAVPFHMWTPDVYeGAPTPVTAFFASA--PKVAAMGLfARvlhdAF-GHavqdwsQVIALLS 277
Cdd:PRK12668 182 GGTAAWLILI--GFGVNAAFPPLHAWLPDAY-PEATVTGSVFLSAftTKTAVYAL-AR----AFpGT------ELLIYIG 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 278 LLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGV-------------QALLVYMAIYVSMNIGTfafilm 344
Cdd:PRK12668 248 AAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAIngavahafnhilyKGLLFMSAGAVLYRTGT------ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 345 mekdgkpiTDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASViGAFYY--L 422
Cdd:PRK12668 322 --------EKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASA-GTFLHfgI 392
|
330 340 350
....*....|....*....|....*....|....*...
gi 568230292 423 RIVYYMYFGEEgEELETNRSPILWGFLMASAAVMLLGI 460
Cdd:PRK12668 393 KLPYFAFFGGD-SGLRVKDAPRNMLVAMGIAAFLCIAI 429
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-429 |
6.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 57.87 E-value: 6.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 106 YPILVaLSAVGMMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSvKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTT 185
Cdd:PRK06591 118 YGILL-FAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNP-KSLIGAFDYLIMGSIGATLILIAIGFLLSITGSL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 186 DFAGIYAVAQHGEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAPKVAAMGLFARVLHDAFGHA 265
Cdd:PRK06591 196 NMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYE 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 266 VQDW--SQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALmgLAAGTAYGVQALLVYMAIYVSMNIGTFAfil 343
Cdd:PRK06591 276 TIKTaiTNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVF--LLYVTENGIIILPSLLLADSINKIALFL--- 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 344 mmekdgkpitdIRALNLYSRREPGKALAMLILLFSLaGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVIASVIGAFYYLR 423
Cdd:PRK06591 351 -----------IDAYNESYKREPNKVLIIIAIICSC-GLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYK 418
|
....*.
gi 568230292 424 IVYYMY 429
Cdd:PRK06591 419 MVLLLF 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
178-421 |
1.85e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 56.47 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 178 VYGFAGTTDFAGIYAVAQ-HGEVSVGLLFGLVFLisGMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGLfA 255
Cdd:MTH00226 205 LYNIHGTTDYLTLASCSHvVSEQTQKWIFLGIFL--AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILlKLGGYGL-V 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 256 RVLHDAFGHAVQDWSQVIALLSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIY--VS 333
Cdd:MTH00226 282 RLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHgiVS 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 334 MNIGTFAFILMMEKDGKPITDIRALNLysrREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAG--LAWLAIAGV 411
Cdd:MTH00226 362 SLLFILVTILYDRHHTRLIKYYRGLSI---TMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNpiIGVFVCSGV 438
|
250
....*....|
gi 568230292 412 IASVIGAFYY 421
Cdd:MTH00226 439 ILSAVYSFYF 448
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
117-432 |
2.20e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 53.47 E-value: 2.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 117 MMVMVSAGNLMSLYMGLELQSLALYVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGFAGTTDFAGIYAVAQH 196
Cdd:MTH00210 124 MIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 197 GEVSVGLLFGLVFLISGMAFKVSAVPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALL 276
Cdd:MTH00210 204 NINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLIIRSGPLFEGSPLALTIVTIL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 277 SLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMglaagtaygVQALLVY-MAIYVSMNIGTFAFILMMEKdGKPI--- 352
Cdd:MTH00210 282 GALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM---------VCGISNYsTSLFHLMNHAFFKALLFLSA-GSVIhav 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 353 ---TDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQA---GLA-WLaiaGVIASVIGAFYYLRIV 425
Cdd:MTH00210 352 sdeQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKyyiAFAyWL---GSFSALLTAFYSIRLI 428
|
....*..
gi 568230292 426 YYMYFGE 432
Cdd:MTH00210 429 YLTFITN 435
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
178-460 |
6.22e-07 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 51.83 E-value: 6.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 178 VYGFAGTTDFAGIYAVAQHGEVS--VGLLFGLVfLISGMAFKVSAVPFHMWTPDVYEGaPTPVTAFFASApkVAAMGlfA 255
Cdd:PRK07390 194 LSPLAGTLNFSDLAAWAATANLDplTATLLGLA-LIAGPTGKCAQFPLHLWLDEAMEG-PNPASILRNSV--VVATG--A 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 256 RVLHDafghaVQDWSQVIALLSLLSMFVGAVAAIG-------QRDIKRLMAYSSIAHMGyaLMGLAAGTAYGVQALLVYM 328
Cdd:PRK07390 268 WVLIK-----LQPVLALSPVALTVLIVIGTVTAIGaslvaiaQIDIKRALSYSTSAYLG--LVFIAVGLQQPDIALLLLL 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 329 AIYVSMNigtfafILMMEKDGKPIT----DIRAL-NLYSRRePGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGL 403
Cdd:PRK07390 341 THAIAKA------LLFMSVGSIILTtitqDLTELgGLWSRM-PATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSP 413
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 568230292 404 aWLAIAGVIASVIGAFYYLRIVYYMYFGEegEELETNRSP-ILWgfLMASAAVMLLGI 460
Cdd:PRK07390 414 -WLVGVLLLVNALTAFNLTRVFRLVFLGK--PQQKTRRSPeVLW--PMALPMVILAGF 466
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
199-320 |
1.71e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 50.33 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 199 VSVGLLFGLVFLISgMAFKVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGLFaRVLHDAFGHAVQDWSQVIALLS 277
Cdd:CHL00011 207 VALEILFYIGFLIA-YAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILlKMGAYGLI-RINMELLPHAHSIFSPWLVIVG 284
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568230292 278 LLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYG 320
Cdd:CHL00011 285 AIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTG 327
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
207-423 |
1.78e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 47.07 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 207 LVFLISGMAfKVSAVPFHMWTPDVYeGAPTPVTAFFASAPKVAAmGLFARVLHDAFGHAVQDWSQVIALLSLLSMFVGAV 286
Cdd:MTH00207 183 LSIMIAAMT-KSAQMPFSSWLPAAM-AAPTPVSALVHSSTLVTA-GVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 287 AAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYMAIYVSMNI---GTFAFILMMEKdgkpitDIRALNLYSR 363
Cdd:MTH00207 260 SAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFvcaGSLIHSHHHSQ------DLRTMGNLTN 333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568230292 364 REPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIAGVI-ASVIGAFYYLR 423
Cdd:MTH00207 334 QMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFlATALTAAYSTR 394
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
199-429 |
2.76e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 43.29 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 199 VSVGLLFGLVFLISGMAF--KVSAVPFHMWTPDVYEGAPTPVTAFFASAP-KVAAMGLFaRVLHdAFGHAVQDWSQVIAL 275
Cdd:MTH00150 145 RKLLSSMGLWGLLVFLAFlvKLPMYPFHLWLPKAHVEAPVAGSMILAGILlKLGGYGIL-RMMM-VFSLSSSSFSIFLIS 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 276 LSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYM-------------AIYVSMNIGTFAFI 342
Cdd:MTH00150 223 LSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMvshgfcssglfclANYTYEKVHSRSLF 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 343 LMMEkdgkpitdirALNLYSrrepgkALAMLILLFSLA--GVPPMLGFFGKLYVLNAAYQAGLaWLAIAGVIASVIGAFY 420
Cdd:MTH00150 303 LSKG----------MLMLYP------SLSLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSP-WFFVPLGLMVFLSGLY 365
|
....*....
gi 568230292 421 YLrivyYMY 429
Cdd:MTH00150 366 SL----YLY 370
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
276-328 |
9.02e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 41.68 E-value: 9.02e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 568230292 276 LSLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYM 328
Cdd:MTH00163 252 ISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMM 304
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
190-430 |
1.25e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 41.49 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 190 IYAVAQHGEVSVGLLFGLvfLISGMAfKVSAVPFHMWTPDVYEGaPTPVTAFFASAPKVAAmGLFARV----LHDAFGHA 265
Cdd:MTH00208 225 LSLNNSNSFLINILLFGI--LLAAAG-KSAQFGLHPWLPAAMEG-PTPVSALLHSSTMVVA-GVFLLIrtspLISNSPWF 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 266 VqdwSQVIALLSLLSMFvGAVAAIGQRDIKRLMAYSSIAHMGyaLMGLAAGTAYGVQALLvymaiyvsmNIGTFAFI--L 343
Cdd:MTH00208 300 L---SLCLILGSLTALF-AASTAISQHDIKKIIAYSTTSQLG--LMVVAIGLNQPNLALF---------HICTHAFFkaM 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 344 MMEKDGKPI------TDIRALNLYSRREPGKALAMLILLFSLAGVPPMLGFFGKLYVLNAAYQAGLAWLAIA-GVIASVI 416
Cdd:MTH00208 365 LFLCSGSIIhslnneQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIIlALIATLL 444
|
250
....*....|....
gi 568230292 417 GAFYYLRIVYYMYF 430
Cdd:MTH00208 445 TAVYSFRIIFFCFL 458
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
203-328 |
2.34e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 40.11 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 203 LLFGLVFLISGMAFKVSAVPF--HMWTPDVYEGAPTPVTAFFASAP-KVAAMGLFArvLHDAFGHAVQDWSQVIALLSLL 279
Cdd:MTH00014 184 YLMNLWWLITILAFMVKMPLYtvHLWLPKAHVEAPVAGSMILAGILlKLGGYGLLR--MSSLFMHINKSLSAPFSSISLV 261
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 568230292 280 SMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGTAYGVQALLVYM 328
Cdd:MTH00014 262 GAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMM 310
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
201-321 |
3.49e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 39.63 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568230292 201 VGLLFGLVFLISGMAFkvsavPFHMWTPDVYEgAPTPVTAFFaSAPKVAAMGL----FARVLHDAFGHAVqdwsqvIALL 276
Cdd:PRK08601 206 INLLLILAVMIPAAQW-----PFQRWLIESAV-APTPVSAIM-HAGLVNAGGImltrFSPLFHDDIAQIL------LLIF 272
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 568230292 277 SLLSMFVGAVAAIGQRDIKRLMAYSSIAHMGYALMGLAAGtAYGV 321
Cdd:PRK08601 273 ASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG-AYSA 316
|
|
| |
