|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
1-656 |
0e+00 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 1367.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWG 80
Cdd:PRK08626 1 MKIIYTDALVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKGEGDNEDVHFADTVKGSDWG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 81 CDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTM 160
Cdd:PRK08626 81 CDQEVARMFVHTAPKAVRELAAWGVPWTRVTAGPRTVVINGEKVTITEKEEAHGLINARDFGGTKKWRTCYTADGTGHTM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 161 LFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIA 240
Cdd:PRK08626 161 LYAVDNEAIKLGVPVHDRKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 241 LETGIAQLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQS 320
Cdd:PRK08626 241 LETGVAPLGNMEAVQFHPTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVKS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 321 PYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEA-KLKGLFSAGEAACWDM 399
Cdd:PRK08626 321 PYGPHLWLDIRILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESyGLKGLFSAGEAACWDM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 400 HGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVMDDNVG 479
Cdd:PRK08626 401 HGFNRLGGNSLAETVVAGMIVGKYVADFCLGNELEIDTALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 480 IFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKRDDIN 559
Cdd:PRK08626 481 IFRNGPELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRNDRD 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 560 WLNRTLASWPNPEQTLPTLEYEALDVNEMEIAPRYRGYGAkGNYIENPLSVKRQEEIDKIQSELeAAGKDRHAIQEALMP 639
Cdd:PRK08626 561 WLNRTLASWPEGEALEPTLEYEPLDVMKMELPPGFRGYGA-GNIIEHPDTEKRQAEIDKILAEL-GEGKDRYEIQHALMP 638
|
650
....*....|....*..
1QLB_A 640 YELPAKYKARNERLGDK 656
Cdd:PRK08626 639 FELPEKYKAKNERLGDT 655
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
7-597 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 888.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNskMSDGDNEDLHFMDTVKGSDWGCDQKVA 86
Cdd:TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGN--VDPDDSWEWHAYDTVKGSDYLADQDAV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 87 RMFVNTAPKAIRELAAWGVPWTRIHkgdrmaiinaqkttiteedfrHGLIHSRDFGGTKKWRTCYTADATGHTMLFAVAN 166
Cdd:TIGR01812 79 EYMCQEAPKAILELEHWGVPFSRTP---------------------DGRIAQRPFGGHSKDRTCYAADKTGHALLHTLYE 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 167 ECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALETGIA 246
Cdd:TIGR01812 138 QCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVP 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 247 qLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQSPYGQHL 326
Cdd:TIGR01812 218 -LKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGSPPGDYV 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 327 WLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAK----LKGLFSAGEAACWDMHGF 402
Cdd:TIGR01812 297 YLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEPIPVRPTAHYSMGGIPTDYTGRVIcetiVKGLFAAGECACVSVHGA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 403 NRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDlETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVMDDNVGIFR 482
Cdd:TIGR01812 377 NRLGGNSLLELVVFGRIAGEAAAEYAAKTGNP-AADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFR 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 483 DGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKRDDINWLN 562
Cdd:TIGR01812 456 TEELLKKAVDEIEELRERYKNVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLK 535
|
570 580 590
....*....|....*....|....*....|....*
1QLB_A 563 RTLASWPNPeqTLPTLEYEALDVNEMEiaPRYRGY 597
Cdd:TIGR01812 536 HTLAYYDNP--GTPRLEYKPVTITKYE--PAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
1-566 |
1.10e-171 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 501.89 E-value: 1.10e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKG---LSTIVLSLIPVKRSHSAAAQGGMQASLgnsKMSDGDNEDLHFMDTVKGS 77
Cdd:PRK06069 1 MEVLKYDVVIVGSGLAGLRAAVAAAERSggkLSVAVVSKTQPMRSHSVSAEGGTAAVL---YPEKGDSFDLHAYDTVKGS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 78 DWGCDQKVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttitEEDfrhGLIHSRDFGGTKKWRTCYTADATG 157
Cdd:PRK06069 78 DFLADQDAVEVFVREAPEEIRFLDHWGVPWSR------------------RPD---GRISQRPFGGMSFPRTTFAADKTG 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 158 HTMLFAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTG 236
Cdd:PRK06069 137 FYIMHTLYSRALRFdNIHFYDEHFVTSLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDG 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 237 TAIALETGIAqLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGK 316
Cdd:PRK06069 217 LAIAYRAGIP-LKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGR 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 317 GVQSPYGQ-HLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE------AKLKGLF 389
Cdd:PRK06069 296 GFKHESGLcYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVTEPIPVRPAAHYTMGGIHTDVYGRvltadgEWVRGLW 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 390 SAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTqvDLETKTLEKFVKGQEAYM-KSLVESKGTEDVFKIKN 468
Cdd:PRK06069 376 AAGEAAAVSVHGANRLGSNSTAECLVWGRIAGEQAAEYALKR--PAPSSPVEKLAEKEEKRIfDKLLKKEGGEPSYEIRR 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 469 RMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHN 548
Cdd:PRK06069 454 ELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHY 533
|
570
....*....|....*...
1QLB_A 549 REDYPKRDDINWLNRTLA 566
Cdd:PRK06069 534 RLDYPKRDDENWLKHTLA 551
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
7-597 |
7.50e-155 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 460.36 E-value: 7.50e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNskMSDgDNEDLHFMDTVKGSDWGCDQKVA 86
Cdd:PTZ00139 31 DAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGN--MTE-DDWRWHAYDTVKGSDWLGDQDAI 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 87 RMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttiTEEdfrhGLIHSRDFGGT--------KKWRTCYTADATGH 158
Cdd:PTZ00139 108 QYMCREAPQAVLELESYGLPFSR-----------------TKD----GKIYQRAFGGQslkfgkggQAYRCAAAADRTGH 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 159 TMLFAVANECLKLGVSIQDRKEAIALI-HQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT 237
Cdd:PTZ00139 167 AMLHTLYGQSLKYDCNFFIEYFALDLImDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 238 AIALETGIAqLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKG 317
Cdd:PTZ00139 247 AMVSRAGLP-LQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRG 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 318 VqSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE----------AKLKG 387
Cdd:PTZ00139 326 C-GPNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQvltqrngdddKIVPG 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 388 LFSAGEAACWDMHGFNRLGGNSVSEAVVagmivgeyFAEHCANT-----QVDLETKTLEKFVkGQE--AYMKSLVESKGT 460
Cdd:PTZ00139 405 LLAAGEAACASVHGANRLGANSLLDIVV--------FGRAAANTvmeilKPGRPQPDLPKDA-GEAsiARLDKIRHNKGD 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 461 EDVFKIKNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDR 540
Cdd:PTZ00139 476 ISTAQIRKRMQRTMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEAR 555
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
1QLB_A 541 TESRGAHNREDYPKRDDINWLNRTLASWPNPEQTLPTLEY----EALDVNEME-IAPRYRGY 597
Cdd:PTZ00139 556 KESRGAHARDDFPERDDKNWMKHTLSYIRDVKKGKVRLTYrpviTTPLDNEMEtVPPAKRVY 617
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
26-597 |
7.53e-154 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 455.76 E-value: 7.53e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 26 QKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSkmsDGDNEDLHFMDTVKGSDWGCDQKVARMFVNTAPKAIRELAAWGV 105
Cdd:TIGR01816 3 KGGVNTACVTKLFPTRSHTVAAQGGISAALGNM---EEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 106 PWTRIHKGdrmaiinaqktTITEEDFRHgliHSRDFG-GTKKWRTCYTADATGHTMLFAVANECLKLGVSIQDRKEAIAL 184
Cdd:TIGR01816 80 PFSRTEDG-----------KIYQRPFGG---HTRDFGkGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 185 IHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALETGIAqLGNMEAVQFHPTPLFPS 264
Cdd:TIGR01816 146 LMEDGECRGVIAYCLETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLP-LQDMEFVQFHPTGIAGA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 265 GILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVqSPYGQHLWLDISILGRKHIETNLRD 344
Cdd:TIGR01816 225 GCLITEGCRGEGGILINANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGV-GPNKDHVYLDLDHLGPEVLEGRLPG 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 345 VQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEA---------KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVV 415
Cdd:TIGR01816 304 ISETARTFAGVDPVKDPIPVLPTVHYNMGGIPTNYHGQVlrdgngndqIVPGLYAAGEAACVSVHGANRLGTNSLLDLVV 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 416 AGMIVGEYFAEHC--ANTQVDLETKTLEKFVKgqeaYMKSLVESKGTEDVFKIKNRMKDVMDDNVGIFRDGPHLEKSVKE 493
Cdd:TIGR01816 384 FGRAAGLSAAEYAkpGSDVKPMPPNAGEESVM----RLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEK 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 494 LEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKRDDINWLNRTLASwPNPEQ 573
Cdd:TIGR01816 460 ISALKERYKNVKINDKSKVWNTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSY-VDINT 538
|
570 580
....*....|....*....|....*..
1QLB_A 574 TLPTLEYEALD---VNEMEIAPRYRGY 597
Cdd:TIGR01816 539 GKVLLSYKPVIfkpLTVADFEPKKRVY 565
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
6-599 |
4.85e-150 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 446.77 E-value: 4.85e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPVKRSHSAAAQGGMQASLGnskmsDGDNEDLHFMDTVKGSDWGCDQ 83
Cdd:PRK09231 5 ADLAIIGAGGAGLRAAIAAAEAnpNLKIALISKVYPMRSHTVAAEGGSAAVAQ-----DHDSFDYHFHDTVAGGDWLCEQ 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 84 KVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttitEEDfrhGLIHSRDFGGTKKWRTCYTADATGHTMLFA 163
Cdd:PRK09231 80 DVVEYFVHHCPTEMTQLEQWGCPWSR------------------KPD---GSVNVRRFGGMKIERTWFAADKTGFHMLHT 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 164 VANECLKLGvSIQ--DRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIAL 241
Cdd:PRK09231 139 LFQTSLKYP-QIQrfDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAY 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 242 ETGIAqLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDY---------EPEKK--ELASRDVVSRRMIE 310
Cdd:PRK09231 218 RHGVP-LRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQDYglgpetplgEPKNKymELGPRDKVSQAFWH 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 311 HIRKGKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFS 390
Cdd:PRK09231 297 EWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 391 AGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETkTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRM 470
Cdd:PRK09231 377 VGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAAERAATAGPGNEA-ALDAQAADVEQRLKALVNQEGGENWAKIRDEM 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 471 KDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNRE 550
Cdd:PRK09231 456 GLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRL 535
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
1QLB_A 551 D--YPKRDDINWLNRTLAsWPNPEQTlPTLEYeaLDVNEMEIAPRYRGYGA 599
Cdd:PRK09231 536 DegCTERDDVNFLKHTLA-FYNADGT-PRIEY--SDVKITKSPPAKRVYGA 582
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
6-565 |
1.00e-136 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 410.27 E-value: 1.00e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGlSTIVLSLIPVKRSHSAAAQGGMQASLGnskmsDGDNEDLHFMDTVKGSDWGCDQKV 85
Cdd:COG0029 5 TDVLVIGSGIAGLSAALKLAERG-RVTLLTKGELGESNTRWAQGGIAAVLD-----PGDSPELHIADTLAAGAGLCDPEA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 86 ARMFVNTAPKAIRELAAWGVPWTRIHKGDrmaiinaqkttiteedFRHGL--IHSRDfggtkkwRTCYTADATGHTMLFA 163
Cdd:COG0029 79 VRVLVEEGPERIRELIELGVPFDRDEDGE----------------LALTRegGHSRR-------RILHAGDATGREIERA 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 164 VANECLKL-GVSIQDRKEAIALI-HQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIAL 241
Cdd:COG0029 136 LLEAVRAHpNITVLENHFAVDLItDADGRCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAY 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 242 ETGiAQLGNMEAVQFHPTPLF----PSGiLLTEGCRGDGGILRDVDGHRFMPDYEPeKKELASRDVVSRRMIEHIRKGKg 317
Cdd:COG0029 216 RAG-ARLADMEFVQFHPTALYhpgaPSF-LISEAVRGEGAVLRNADGERFMPDYHP-RAELAPRDVVARAIDAEMKKTG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 318 vqspyGQHLWLDISILGRKHIETNLRDVQEICEYFaGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAACW 397
Cdd:COG0029 292 -----GDCVYLDISHLDAEFIRERFPTIYARCLEL-GIDITKEPIPVAPAAHYTMGGVATDLDGRTSIPGLYAVGEVACT 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 398 DMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEkfvkgqeaymKSLVESKGTEDVFKIKNRMKDVMDDN 477
Cdd:COG0029 366 GVHGANRLASNSLLEGLVFGRRAAEDIAARLAESPLPPEIPEWD----------ESVTDPDEEVLIAHLRDELRRLMWDY 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 478 VGIFRDGPHLEKSVKELEELYKKSKNVgiknKRLHANPELEEAYRvpmMLKVALCVAKGALDRTESRGAHNREDYPKRDD 557
Cdd:COG0029 436 VGIVRTAKGLERALRRLELLREEIEEY----ANFRVSRDLLELRN---LLLVAELIVRAALARKESRGAHYRSDYPETDP 508
|
....*...
1QLB_A 558 iNWLNRTL 565
Cdd:COG0029 509 -AWRRHTV 515
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
7-597 |
8.44e-134 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 406.94 E-value: 8.44e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNskMSDgDNEDLHFMDTVKGSDWGCDQKVA 86
Cdd:PLN00128 52 DAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGN--MTE-DDWRWHMYDTVKGSDWLGDQDAI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 87 RMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttiTEEdfrhGLIHSRDFGGT--------KKWRTCYTADATGH 158
Cdd:PLN00128 129 QYMCREAPKAVIELENYGLPFSR-----------------TED----GKIYQRAFGGQsldfgkggQAYRCACAADRTGH 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 159 TMLFAVANECLKLGVSIQDRKEAIALI-HQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGT 237
Cdd:PLN00128 188 AMLHTLYGQAMKHNTQFFVEYFALDLImDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGN 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 238 AIALETGIAqLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKG 317
Cdd:PLN00128 268 AMVARAGLP-LQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRG 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 318 VqSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE----------AKLKG 387
Cdd:PLN00128 347 V-GPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvvtikgddpdAVVPG 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 388 LFSAGEAACWDMHGFNRLGGNSVSEAVVagmivgeyFAEHCANT----------QVDLETKTLEKFVkgqeAYMKSLVES 457
Cdd:PLN00128 426 LMAAGEAACASVHGANRLGANSLLDIVV--------FGRACANRvaeiakpgekQKPLPKDAGEKTI----AWLDKLRNA 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 458 KGTEDVFKIKNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGA 537
Cdd:PLN00128 494 NGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSA 573
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
1QLB_A 538 LDRTESRGAHNREDYPKRDDINWLNRTLASWPNPEQTLP--TLEYEALDvNEME-IAPRYRGY 597
Cdd:PLN00128 574 EARKESRGAHAREDFTKRDDENWMKHTLGYWEEGKVRLDyrPVHMNTLD-DEVEtFPPKARVY 635
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
2-566 |
1.20e-126 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 386.16 E-value: 1.20e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 2 KVQYcDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASL-GNSkmSDGDNEDLHFMDTVKGSDWG 80
Cdd:PRK06452 3 KIEY-DAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNS--DPNDNPDYMTYDTVKGGDYL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 81 CDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGdRMAIinaqkttiteedfrhglihsRDFGGTKKWRTCYTADATGHTM 160
Cdd:PRK06452 80 VDQDAAELLSNKSGEIVMLLERWGALFNRQPDG-RVAV--------------------RYFGGQTYPRTRFVGDKTGMAL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 161 LFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIA 240
Cdd:PRK06452 139 LHTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIA 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 241 LETGIAqLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQs 320
Cdd:PRK06452 219 LRAGAA-LKDPEFVQFHPTALYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGFP- 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 321 pyGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE-AKLKGLFSAGEAACWDM 399
Cdd:PRK06452 297 --GGYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVDIDGRnPDIVGLFSAGEAACVSV 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 400 HGFNRLGGNSVSEAVVAGMIVG----EYFAEHCANTQVDLEtKTLEKFVkgQEAYmkSLVESKGTEDVFKIKNRMKDVMD 475
Cdd:PRK06452 375 HGANRLGSNSLLDTLVFGQVTGrtvvQFLKSNPGNPTSNYE-KEAEKVV--DDAY--KFVKSESGVHFGQILEKLRDTMW 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 476 DNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKR 555
Cdd:PRK06452 450 DYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDR 529
|
570
....*....|.
1QLB_A 556 DDINWLNRTLA 566
Cdd:PRK06452 530 DDNNWLKHTIA 540
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
7-597 |
3.67e-126 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 385.24 E-value: 3.67e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLST---IVLSLIPVkRSHSAAAQGGMQASLGNskMSDGDNEDLHFMDTVKGSDWGCDQ 83
Cdd:PRK05945 5 DVVIVGGGLAGCRAALEIKRLDPSLdvaVVAKTHPI-RSHSVAAQGGIAASLKN--VDPEDSWEAHAFDTVKGSDYLADQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 84 KVARMFVNTAPKAIRELAAWGVPWTRIhkgdrmaiinaqkttiteEDfrhGLIHSRDFGGTKKWRTCYTADATGHTMLFA 163
Cdd:PRK05945 82 DAVAILTQEAPDVIIDLEHLGVLFSRL------------------PD---GRIAQRAFGGHSHNRTCYAADKTGHAILHE 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 164 VANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALET 243
Cdd:PRK05945 141 LVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 244 GIAqLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQ---S 320
Cdd:PRK05945 221 GLP-LEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGDRFMADYAPSRMELAPRDITSRAITLEIRAGRGINpdgS 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 321 PYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKL------KGLFSAGEA 394
Cdd:PRK05945 300 AGGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEPMPVRPTVHYCMGGIPVNTDGRVRRsadglvEGFFAAGEC 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 395 ACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQvdLETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVM 474
Cdd:PRK05945 380 ACVSVHGANRLGSNSLLECVVYGRRTGAAIAEYVQGRK--LPEVDEQRYLKEAKQRIQALLDQSGTYRINQLRQQFQDCM 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 475 DDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPK 554
Cdd:PRK05945 458 TDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQ 537
|
570 580 590 600
....*....|....*....|....*....|....*....|...
1QLB_A 555 RDDINWLNRTLASWpnpEQTLPTLEYEALDVNEMEiaPRYRGY 597
Cdd:PRK05945 538 RDDQNFLKHTLAYY---SPAGIDIQYMPVVITMFE--PQERKY 575
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
7-410 |
8.04e-126 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 377.78 E-value: 8.04e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQAsLGNSKMSDGDNEDLHFMDTVKGSDWGCDQKVA 86
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDA-LGNPPQGGIDSPELHPTDTLKGLDELADHPYV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 87 RMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttiteedFRHGLIHSRDFGGTK-KWRTCYTA------DATGHT 159
Cdd:pfam00890 80 EAFVEAAPEAVDWLEALGVPFSR---------------------TEDGHLDLRPLGGLSaTWRTPHDAadrrrgLGTGHA 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 160 MLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR---------IYKNTTNA 229
Cdd:pfam00890 139 LLARLLEGLRKAGVDFQPRTAADDLIVEDGRVTGAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNP 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 230 VVCEGTGTAIALETGIAQLG-NMEAVQFHPTPLFPSGI---LLTEGCRGDGGILRDVDGHRFMpdyepekKELASRDVVS 305
Cdd:pfam00890 219 PANTGDGLALALRAGAALTDdLMEFVQFHPTSLVGIRLgsgLLIEALRGEGGILVNKDGRRFM-------NELASRDVVS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 306 RRMIEHirkgkGVQSPYGQHLWLDISI-LGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAK 384
Cdd:pfam00890 292 RAITRN-----EIDEGRGANVYLDASGsLDAEGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL 366
|
410 420 430
....*....|....*....|....*....|..
1QLB_A 385 ------LKGLFSAGEAACWDMHGFNRLGGNSV 410
Cdd:pfam00890 367 dadgqpIPGLYAAGEVACGGVHGANRLGGNSL 398
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
6-430 |
4.10e-123 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 372.63 E-value: 4.10e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASlGNSKMS--DGDNEDLHFMDTVKGSDWGCDQ 83
Cdd:COG1053 4 YDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAA-GTNVQKaaGEDSPEEHFYDTVKGGDGLADQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 84 KVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAiinaqkttiteedfrhglihsrdFGGTKKWRTCYTADATGHTMLFA 163
Cdd:COG1053 83 DLVEALAEEAPEAIDWLEAQGVPFSRTPDGRLPQ-----------------------FGGHSVGRTCYAGDGTGHALLAT 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 164 VANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDlVTGDIIAYVAKGTLIATGGYGRIYK------------NTTNAVV 231
Cdd:COG1053 140 LYQAALRLGVEIFTETEVLDLIVDDGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYEmraeylpeaegaLSTNAPG 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 232 CEGTGTAIALETGiAQLGNMEAVQFHPTPLFPSGILLTEGCRG-DGGILRDVDGHRFMPDYepekkelASRDVVSRRMIE 310
Cdd:COG1053 219 NTGDGIAMALRAG-AALADMEFVQFHPTGLPGDGGLISEGARGkPGGILVNKEGERFMNEY-------APRDVVSRAILE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 311 HIRKGKgvqspygqHLWLDISILGR-------------KHIE-----TNLrDVQEICEYF--------AGIDPAEKWA-- 362
Cdd:COG1053 291 EIDEPA--------YLVLDLRHRRRleeyleagylvkaDTIEelaakLGI-DAAELAATVarynaaakAGVDPRGTCLgp 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 363 ---------PVLPMQHYSMGGIRTDYRGEAK------LKGLFSAGEaACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEH 427
Cdd:COG1053 362 ikegpfyaiPVRPGVHYTMGGLRVDADARVLdadgtpIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHAAEY 440
|
...
1QLB_A 428 CAN 430
Cdd:COG1053 441 AKA 443
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
1-567 |
1.19e-116 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 359.30 E-value: 1.19e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMqaslgNSKMSDGDNEDLHFMDTVKGSDWG 80
Cdd:PRK06263 3 DEIMITDVLIIGSGGAGARAAIEAERGKNVVIVSKGLFGKSGCTVMAEGGY-----NAVLNPEDSFEKHFEDTMKGGAYL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 81 CDQKVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttiTEEdfrhGLIHSRDFGGTKKWRTCYTADATGHTM 160
Cdd:PRK06263 78 NDPKLVEILVKEAPKRLKDLEKFGALFDR-----------------TED----GEIAQRPFGGQSFNRTCYAGDRTGHEM 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 161 LFAVANECLKLGVSIQDRKEAIALIHQDGK-CYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAI 239
Cdd:PRK06263 137 MMGLMEYLIKERIKILEEVMAIKLIVDENReVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAI 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 240 ALETGiAQLGNMEAVQFHPT----PLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKG 315
Cdd:PRK06263 217 AYRAG-AELIDMEMVQFHPTgmvyPYSGRGILVTEAVRGEGGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEG 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 316 KGVqsPYGQhLWLDISILGRKHIETNLrdvQEICEYF--AGID----PAEkwapVLPMQHYSMGGIRTDYRGEAKLKGLF 389
Cdd:PRK06263 296 RGT--NHGG-VYLDVTHLPDEVIEEKL---ETMLEQFldVGVDirkePME----VAPTAHHFMGGIRINEDCETNIPGLF 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 390 SAGEAACwDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTqvdlETKTLEKFVKGQEAYMKSLVE-SKGTEDVFKIKN 468
Cdd:PRK06263 366 ACGEVAG-GVHGANRLGGNALADTQVFGAIAGKSAAKNAENN----EFKKVNRSVEEDIARIKSEIKfLNGSINPYDLID 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 469 RMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRlhanpELEEAYRVPMMLKVALCVAKGALDRTESRGAHN 548
Cdd:PRK06263 441 ELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGIV-----DFNKALELENMILVAELVIKSALLRKESRGAHY 515
|
570
....*....|....*....
1QLB_A 549 REDYPKRDDiNWLNRTLAS 567
Cdd:PRK06263 516 REDYPETND-EWFGNIILN 533
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
10-601 |
7.85e-110 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 343.11 E-value: 7.85e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 10 VIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLgNSKmSDGDNEDLHFMDTVKGSDWGCDQKVARMF 89
Cdd:PRK08641 8 VVGGGLAGLMATIKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAV-NTK-GEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 90 VNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttiTEEdfrhGLIHSRDFGGTKKWRTCYTADATGHTMLFAVANECL 169
Cdd:PRK08641 86 CEAAPGIIHLLDRMGVMFNR-----------------TPE----GLLDFRRFGGTLHHRTAFAGATTGQQLLYALDEQVR 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 170 KLGVSIQDRK----EAI-ALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALETG 244
Cdd:PRK08641 145 RYEVAGLVTKyegwEFLgAVLDDEGVCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQG 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 245 iAQLGNMEAVQFHPTPLfpSGI----LLTEGCRGDGG---ILRDVDGHRFMPDYEPEKKELASRDVVSRRmIEHI--RKG 315
Cdd:PRK08641 225 -AYYANGEFIQIHPTAI--PGDdklrLMSESARGEGGrvwTYKDGKPWYFLEEKYPAYGNLVPRDIATRE-IFDVcvEQK 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 316 KGVQspyGQHL-WLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEA 394
Cdd:PRK08641 301 LGIN---GENMvYLDLSHKDPKELDIKLGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDYDQMTNIPGLFAAGEC 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 395 AcWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCAN---TQVDLETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMK 471
Cdd:PRK08641 378 D-YSYHGANRLGANSLLSAIYGGMVAGPNAVEYIKGlgkSADDVSSSVFEQALKQEQEKFDNILSMDGTENAYVLHKELG 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 472 DVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNRED 551
Cdd:PRK08641 457 EWMTDNVTVVRENDKLLETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPE 536
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
1QLB_A 552 YPKRDDINWLNRTLASWpNPEQTLPTLEYEALDVNemEIAPRYRGYGAKG 601
Cdd:PRK08641 537 FPERNDENWLKTTMATY-TPEGEEPEFSYEDVDTS--LIPPRKRDYTSKK 583
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
7-583 |
1.30e-98 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 315.05 E-value: 1.30e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNskMSDGDNEDLHFMDTVKGSDWGCDQKVA 86
Cdd:PRK07803 10 DVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGN--VNPKDNWQVHFRDTMRGGKFLNNWRMA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 87 RMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttiTEEdfrhGLIHSRDFGGTKKWRTCYTADATGHTMLFAVAN 166
Cdd:PRK07803 88 ELHAKEAPDRVWELETYGALFDR-----------------TKD----GRISQRNFGGHTYPRLAHVGDRTGLELIRTLQQ 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 167 EclklGVSIQDRKEAIA-----------------LIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNA 229
Cdd:PRK07803 147 K----IVSLQQEDHAELgdyearikvfaectiteLLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNS 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 230 VVCEGTGTAIALETGiAQLGNMEAVQFHPTPLF--PS--GILLTEGCRGDGGILRDVDGHRFMPDYEPE----------- 294
Cdd:PRK07803 223 WEYTGDGHALALRAG-ATLINMEFVQFHPTGMVwpPSvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPDvfkgqyaetee 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 295 --------------KKELASRDVVSRRMIEHIRKGKGvqSPYGQhLWLDI-SILGRKHIETNLRDVQEICEYFAGIDPAE 359
Cdd:PRK07803 302 eadrwykdndnnrrPPELLPRDEVARAINSEVKAGRG--SPHGG-VYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITK 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 360 KWAPVLPMQHYSMGGIRTDY-RGEAKLKGLFSAGEAACwDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCAntQVDLETK 438
Cdd:PRK07803 379 EPMEVGPTCHYVMGGVEVDPdTGAATVPGLFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVR--GLGSRPA 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 439 TLEKFVKGQEAYMKSLVESK-GTEDVFKIKNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHaNPEL 517
Cdd:PRK07803 456 VSEEAVDAAAREALAPFERPaGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVEGHRQY-NPGW 534
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
1QLB_A 518 EEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKRDDiNWLNRTLASWPNPEQTLPTLEYEAL 583
Cdd:PRK07803 535 HLALDLRNMLLVSECVARAALERTESRGGHTRDDHPGMDP-EWRRINLVCRADPVGGHVTVTRQPQ 599
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
3-557 |
2.39e-90 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 292.39 E-value: 2.39e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPvKRSHSAAAQGGMQASLGNSkmsdgDNEDLHFMDTVKGSDWGCD 82
Cdd:PLN02815 27 TKYFDFLVIGSGIAGLRYALEVAEYGTVAIITKDEP-HESNTNYAQGGVSAVLDPS-----DSVESHMRDTIVAGAFLCD 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttitEEDfrhGLIHSRDFGGTKKWRTCYTADATG----H 158
Cdd:PLN02815 101 EETVRVVCTEGPERVKELIAMGASFDH------------------GED---GNLHLAREGGHSHHRIVHAADMTGreieR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 159 TMLFAVANEClklGVSIQDRKEAIALI-HQDG---KCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEG 234
Cdd:PLN02815 160 ALLEAVKNDP---NITFFEHHFAIDLLtSQDGgsiVCHGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 235 TGTAIALETGiAQLGNMEAVQFHPTPLFPSGI------------LLTEGCRGDGGILRDVDGHRFMPDYEpEKKELASRD 302
Cdd:PLN02815 237 DGIAMAHRAQ-AVVSNMEFVQFHPTALADEGLpikpakarenafLITEAVRGDGGILYNLAGERFMPLYD-ERAELAPRD 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 303 VVSRRMIEHIRKGKGvqspygQHLWLDISILGRKHIETNLRDVQEIC-EYfaGIDPAEKWAPVLPMQHYSMGGIRTDYRG 381
Cdd:PLN02815 315 VVARSIDDQLKKRNE------KYVLLDISHKPREEILSHFPNIAAEClKR--GLDITKQPIPVVPAAHYMCGGVRTGLQG 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 382 EAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVagmivgeyFAEHCANTQVDLETKTLEKfVKGQEAYMKSLVESKG-- 459
Cdd:PLN02815 387 ETNVQGLYAAGEVACTGLHGANRLASNSLLEALV--------FARRAVQPSIDHMARALRD-VSAAAAWARPVAPTALad 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 460 --TEDVFKI----KNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVgIKNKRLHANPELEEAYRVPMMLKVALCV 533
Cdd:PLN02815 458 svMDEILEWtavvRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWEAI-LFRHGWKPTMVGLEACEMRNLFCVAKLV 536
|
570 580
....*....|....*....|....
1QLB_A 534 AKGALDRTESRGAHNREDYPKRDD 557
Cdd:PLN02815 537 VSSALARKESRGLHYTTDYPELVE 560
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
7-556 |
3.21e-87 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 281.80 E-value: 3.21e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVAtqqkgLS---TIVLSLIPV-KRSHSAAAQGGMQASLGnskmsDGDNEDLHFMDTVKGSDWGCD 82
Cdd:PRK07512 11 RPVIVGGGLAGLMAALK-----LAprpVVVLSPAPLgEGASSAWAQGGIAAALG-----PDDSPALHAADTLAAGAGLCD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 83 QKVARMFVNTAPKAIRELAAWGVPWtrihkgDRMAiinaqkttitEEDFRHGL--IHSR----DFGGtkkwrtcytaDAT 156
Cdd:PRK07512 81 PAVAALITAEAPAAIEDLLRLGVPF------DRDA----------DGRLALGLeaAHSRrrivHVGG----------DGA 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 157 GHTMLFAVAnECLKLGVSIQ--DRKEAIALIHQDGKCYGAVVRdlVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEG 234
Cdd:PRK07512 135 GAAIMRALI-AAVRATPSITvlEGAEARRLLVDDGAVAGVLAA--TAGGPVVLPARAVVLATGGIGGLYAVTTNPAGAFG 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 235 TGTAIALETGiAQLGNMEAVQFHPT----PLFPSGiLLTEGCRGDGGILRDVDGHRFMPDYEPeKKELASRDVVSRRMIE 310
Cdd:PRK07512 212 QGLALAARAG-AVIADPEFVQFHPTaidiGRDPAP-LATEALRGEGAILINEDGERFMADIHP-GAELAPRDVVARAVFA 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 311 HIRKGKGVqspygqhlWLD-ISILGrKHIETNLRDVQEICEYfAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLF 389
Cdd:PRK07512 289 EIAAGRGA--------FLDaRAALG-AHFATRFPTVYAACRS-AGIDPARQPIPVAPAAHYHMGGIAVDADGRSSLPGLW 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 390 SAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKGQEAymkslveskgtedvfkiknR 469
Cdd:PRK07512 359 AAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAAAAPLSAAAAPALDPADLA-------------------L 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 470 MKDVMDDNVGIFRDGPHLEKSVKELEelykksknvgiknkrlhanpELEEAY-RVPMMLKVALCVAKGALDRTESRGAHN 548
Cdd:PRK07512 420 LRPIMSRHVGVLRDADGLRRAIAALL--------------------PLEAGAgPAADPATVALLIAVAALAREESRGAHF 479
|
....*...
1QLB_A 549 REDYPKRD 556
Cdd:PRK07512 480 RTDFPLTA 487
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
6-553 |
6.31e-85 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 275.14 E-value: 6.31e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGlSTIVLSLIPVKRSHSAAAQGGMQASLgnskmSDGDNEDLHFMDTVKGSDWGCDQKV 85
Cdd:TIGR00551 3 MDVVVIGSGAAGLSAALALAEKG-RVSVITKASVTDSNSYYAQGGIAAAL-----AETDSIDAHVEDTLAAGAGICDEEA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 86 ARMFVNTAPKAIRELAAWGVPWTRiHKGDRMAIinaqkttiTEEdfrhglihsrdfGGTKKWRTCYTADATGH---TMLF 162
Cdd:TIGR00551 77 VWFVVSDGSEAVQFLVSHGVTFDR-NEQGGVAL--------TRE------------GGHSYPRIFHAGDATGReiiPTLE 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 163 AVANECLKlgVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAyvAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALE 242
Cdd:TIGR00551 136 KHARSEPN--VNIIEGEFALDLLIETGRCAGVFVQGSGTLETLH--ADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWR 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 243 TGiAQLGNMEAVQFHPTPLFPSGI---LLTEGCRGDGGILRDVDGHRFMPDYEPeKKELASRDVVSRRMIEHIRKGKGvq 319
Cdd:TIGR00551 212 AG-VPVRDLEFVQFHPTALIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHP-RGELAPRDIVARAIDMEMAEGGG-- 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 320 spygQHLWLDISilGRKHIETNLRDVQEICEYfAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAACWDM 399
Cdd:TIGR00551 288 ----DCVFLDAS--GIENFKDRFPTIYAVCRG-AGIDPEREPIPVAPGAHYTMGGISVDAFGRTTIPGLYAIGETACTGL 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 400 HGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQvDLETKTLEKFVKGQEAYMKSLVESKGTEDvfkiknrmKDVMDDNVG 479
Cdd:TIGR00551 361 HGANRLASNSLLECLVFGLRAARTISREPPYAS-REYQSGVWDEPRSENPLDRHELQHKMSSL--------RSVLWNHAG 431
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
1QLB_A 480 IFRDGPHLEKSVKELEELYKksknvgiknkrlhanpELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYP 553
Cdd:TIGR00551 432 IVRLEWSLREALRKLVEIQD----------------EVDERMELSNLKLVAKLVTISALKREESRGAHYRLDYP 489
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
4-565 |
7.25e-84 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 274.23 E-value: 7.25e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 4 QYCDSLVIGGGLAGLRAAV---ATQQKGLSTIVLslipVKRSHSAAAQGGMQASLgnskmSDGDNEDLHFMDTVKGSDWG 80
Cdd:PRK07395 8 SQFDVLVVGSGAAGLYAALclpSHLRVGLITKDT----LKTSASDWAQGGIAAAI-----APDDSPKLHYEDTLKAGAGL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 81 CDQKVARMFVNTAPKAIRELAAWGVPWTRihKGDRMAIinaqkttiTEEdfrhgLIHSRDfggtkkwRTCYTADATGHTM 160
Cdd:PRK07395 79 CDPEAVRFLVEQAPEAIASLVEMGVAFDR--HGQHLAL--------TLE-----AAHSRP-------RVLHAADTTGRAI 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 161 LFAVANECLKLGvSIQDRKEAIALI----HQDGKCYGAVVrdLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTG 236
Cdd:PRK07395 137 VTTLTEQVLQRP-NIEIISQALALSlwlePETGRCQGISL--LYQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDG 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 237 TAIALETGiAQLGNMEAVQFHPTPLFPSG---ILLTEGCRGDGGILRDVDGHRFMPDYEPeKKELASRDVVSRRMIEHIR 313
Cdd:PRK07395 214 VALAWRAG-AQLRDLEFFQFHPTALTKPGaprFLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQ 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 314 KGKgvQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFaGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGE 393
Cdd:PRK07395 292 KTA--TDPATAHVWLDLRPIPAERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVTDLNNQTSIPGLYAVGE 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 394 AACWDMHGFNRLGGNSVSEAVVagmivgeyFAEHCAntQVDLETKTLEKFVKGQEAYMKSLVESKGTEDVF-KIKNRMKD 472
Cdd:PRK07395 369 TASTGVHGANRLASNSLLECLV--------FAAQLA--QLELPIEPPASPDLPPISFIIDASQWKNEQEQIqRIRQELPE 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 473 VMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLH---------ANPELEEAYRVPM----MLKVALCVAKGALD 539
Cdd:PRK07395 439 LVWQSAGICREADTLERAIAQVEQWQQQLAALPLSQFLANlppgqtvsfNGPDAEQQLRLWAetrnLLDIAYLILKSALF 518
|
570 580
....*....|....*....|....*.
1QLB_A 540 RTESRGAHNREDYPKRDDiNWLNRTL 565
Cdd:PRK07395 519 RTESRGGHYRLDYPQTDP-AWQVHTL 543
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
7-563 |
4.87e-77 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 254.91 E-value: 4.87e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKgLSTIVLSLIPVKRSHSAAAQGGMQASlgnskMSDGDNEDLHFMDTVKGsdwGC---DQ 83
Cdd:PRK08071 5 DVIIIGSGIAALTVAKELCHE-YNVIIITKKTKRNSNSHLAQGGIAAA-----VATYDSPNDHFEDTLVA---GChhnNE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 84 KVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttitEEdfrHGLIHSRDFGGTKKWRTCYTA-DATGHTMLF 162
Cdd:PRK08071 76 RAVRYLVEEGPKEIQELIENGMPFDG------------------DE---TGPLHLGKEGAHRKRRILHAGgDATGKNLLE 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 163 AVANEcLKLGVSIQDRKEAIALIHQDGKCYGAVVRDlVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALE 242
Cdd:PRK08071 135 HLLQE-LVPHVTVVEQEMVIDLIIENGRCIGVLTKD-SEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYR 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 243 TGiAQLGNMEAVQFHPTPLFPSGI---LLTEGCRGDGGILRDVDGHRFMPDYEPEKkELASRDVVSRRMIEHIRKGKGVq 319
Cdd:PRK08071 213 AG-AELVDLEFIQFHPTMLYANGRcvgLVSEAVRGEGAVLINEDGRRFMMGIHPLA-DLAPRDVVARAIHEELLSGEKV- 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 320 spygqhlWLDISILgrKHIETNLRDVQEICEYfAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAACWDM 399
Cdd:PRK08071 290 -------YLNISSI--QNFEERFPTISALCEK-NGVDIETKRIPVVPGAHFLMGGVKTNLDGETSIPGLYAIGEVACTGV 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 400 HGFNRLGGNSVSEAVVAGMIVGEYfaehcantqvdLETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVmddnVG 479
Cdd:PRK08071 360 HGANRLASNSLLEGLVFGKRAAEH-----------ILTKATKPRLNPFAEKEKKFIVLNHLPTKEEIQEKMMKY----VG 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 480 IFRDGPHLEKSVKELEELYKKSKNVGIKNkrlHANPELEEAYrvpmMLKVALCVAKGALDRTESRGAHNREDYPKRddiN 559
Cdd:PRK08071 425 IVRTEQSLSEAKRWLEKYGVRNMILDHDA---LTNEEIELSH----MLTVAKLIVVSALQRTESRGGHYRSDYPHR---N 494
|
....
1QLB_A 560 WLNR 563
Cdd:PRK08071 495 WRGK 498
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
7-565 |
4.01e-72 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 242.57 E-value: 4.01e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNskmsdGDNEDLHFMDTVKGSDWGCDQKVA 86
Cdd:PRK07804 18 DVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP-----GDSPEAHVADTLVAGAGLCDPDAV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 87 RMFVNTAPKAIRELAAWGVPWTRIHKGDRMaiinaqkttITEE--DFRHGLIHSrdfGGtkkwrtcytaDATG----HTM 160
Cdd:PRK07804 93 RSLVAEGPRAVRELVALGARFDESPDGRWA---------LTREggHSRRRIVHA---GG----------DATGaevqRAL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 161 LFAVANECLKLgvsiqdRKEAIA---LIHQDGKCYGAVVRDLVTGD---IIAYVAKGTLIATGGYGRIYKNTTNAVVCEG 234
Cdd:PRK07804 151 DAAVRADPLDI------REHALAldlLTDGTGAVAGVTLHVLGEGSpdgVGAVHAPAVVLATGGLGQLYAATTNPAGSTG 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 235 TGTAIALETGiAQLGNMEAVQFHPTPLF-PSGI-----LLTEGCRGDGGILRDVDGHRFMPDYEPeKKELASRDVVS--- 305
Cdd:PRK07804 225 DGVALALRAG-AAVSDLEFVQFHPTVLFlGPAAggqrpLISEAVRGEGAILVDAQGNRFMAGVHP-LADLAPRDVVAkai 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 306 -RRMIEHirkgkGVQspygqHLWLDISilGRKHIETNLRDVQEICEYfAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAK 384
Cdd:PRK07804 303 dRRMKAT-----GDD-----HVYLDAR--GIEGFARRFPTITASCRA-AGIDPVRQPIPVAPAAHYSCGGVVTDVYGRTS 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 385 LKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKgqeaymksLVESKGTEDVf 464
Cdd:PRK07804 370 VPGLYAAGEVACTGVHGANRLASNSLLEGLVVGERAGAAAAAHAAAAGRPRATPAVGPEPG--------LLPALDRAEL- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 465 kiknrmKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIknkrlhanPELEEAyrvpMMLKVALCVAKGALDRTESR 544
Cdd:PRK07804 441 ------QRAMTRGAGVLRSAAGLARAADRLAAGAPARVVPGR--------ADWEDT----NLTLVARALVAAALARTESR 502
|
570 580
....*....|....*....|.
1QLB_A 545 GAHNREDYPKRDDiNWLNRTL 565
Cdd:PRK07804 503 GCHWREDFPDTDD-EWARSIV 522
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
7-593 |
2.39e-68 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 235.10 E-value: 2.39e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSL--IPvKRSHSAAAQGGMQASlgNSKMSDGDNEDLHFMDTVKGSDWGCD-- 82
Cdd:PRK07573 37 DVIVVGTGLAGASAAATLGELGYNVKVFCYqdSP-RRAHSIAAQGGINAA--KNYQNDGDSVYRLFYDTVKGGDFRARea 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 83 --QKVARMFVNTapkaIRELAAWGVPWTRihkgdrmaiinaqkttitEEDfrhGLIHSRDFGGTKKWRTCYTADATGHTM 160
Cdd:PRK07573 114 nvYRLAEVSVNI----IDQCVAQGVPFAR------------------EYG---GLLANRSFGGAQVSRTFYARGQTGQQL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 161 LFAVA---NECLKLG-VSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTG 236
Cdd:PRK07573 169 LLGAYqalSRQIAAGtVKMYTRTEMLDLVVVDGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNATA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 237 TAIALETGiAQLGNMEAVQFHPTPLFPSG------ILLTEGCRGDGGI-----LRDVDGHRFMP----DYEPEKK----- 296
Cdd:PRK07573 249 IWRAHKKG-AYFANPCFTQIHPTCIPVSGdyqsklTLMSESLRNDGRIwvpkkKGDKRKPNDIPeeerDYYLERRypafg 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 297 ELASRDVVSRRMIEHIRKGKGVqSPYGQHLWLD----ISILGRKHIET---NLRDV-QEIceyfAGIDPAEKwapvlPMQ 368
Cdd:PRK07573 328 NLVPRDVASRAAKERCDAGRGV-GPTGLGVYLDfadaIKRLGKDVIRErygNLFDMyERI----TGENPYET-----PMR 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 369 -----HYSMGGIRTDYRGEAKLKGLFSAGEAACWDmHGFNRLGGNSVSEAVVAGMIV-----GEYFAEHCANTQVDLETK 438
Cdd:PRK07573 398 iypavHYTMGGLWVDYNLMSTIPGLFVIGEANFSD-HGANRLGASALMQGLADGYFVlpytiGNYLADTIGTPKVSTDHP 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 439 TLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKK-SKNVGIKNKRLHANPEL 517
Cdd:PRK07573 477 EFKEAEAEVQDRIDRLLNIKGKRTVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEfWKNVRVPGSADELNQEL 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 518 EEAYRVPMMLKVALCVAKGALDRTESRGAHNREDY------PKRDDINWLnrTLASWP-NPEQTLPTLEYEALDVNEMEI 590
Cdd:PRK07573 557 EKAGRVADFLELGELMCRDALHREESCGGHFREEHqtedgeALRDDENFA--YVAAWEyKGDGKEPVLHKEPLEFENVKL 634
|
...
1QLB_A 591 APR 593
Cdd:PRK07573 635 AQR 637
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
6-557 |
7.57e-67 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 228.26 E-value: 7.57e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAA--VATQQKglsTIVLSLIPVKRSHSAAAQGGMQASLgnskmSDGDNEDLHFMDTVKGSDWGCDQ 83
Cdd:PRK09077 9 CDVLIIGSGAAGLSLAlrLAEHRR---VAVLSKGPLSEGSTFYAQGGIAAVL-----DETDSIESHVEDTLIAGAGLCDE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 84 KVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaQKTTITEEDFrhgliHSRDFGGTKKWRTCYTADATGH----T 159
Cdd:PRK09077 81 DAVRFIAENAREAVQWLIDQGVPFTT------------DEQANGEEGY-----HLTREGGHSHRRILHAADATGKavqtT 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 160 MLFAVANeclKLGVSIQDRKEAIALI------HQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCE 233
Cdd:PRK09077 144 LVERARN---HPNITVLERHNAIDLItsdklgLPGRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIAS 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 234 GTGTAIALETGiAQLGNMEAVQFHPTPLF-PSG--ILLTEGCRGDGGILRDVDGHRFMPDYEpEKKELASRDVVSRrMIE 310
Cdd:PRK09077 221 GDGIAMAWRAG-CRVANMEFNQFHPTCLYhPQArsFLITEALRGEGAYLKLPDGTRFMPDFD-ERAELAPRDIVAR-AID 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 311 HIRKGKGVQspygqHLWLDIS------IlgRKHIETnlrdVQEICEYFaGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAK 384
Cdd:PRK09077 298 HEMKRLGAD-----CVYLDIShkpadfI--RQHFPT----IYERCLEL-GIDITKEPIPVVPAAHYTCGGVMVDLHGRTD 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 385 LKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEkfvkgqeaymkslvESKGT---E 461
Cdd:PRK09077 366 LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSRLPKAPMPPTLPAWD--------------ESRVTdsdE 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 462 DVFKIKN--RMKDVMDDNVGIFRDGPHLEKSV-------KELEELYkksKNVGIKNKRLhanpELEEayrvpmMLKVALC 532
Cdd:PRK09077 432 EVVIQHNwhELRLFMWDYVGIVRTTKRLERALhrirllqQEIDEYY---ANFRVSNNLL----ELRN------LVQVAEL 498
|
570 580
....*....|....*....|....*
1QLB_A 533 VAKGALDRTESRGAHNREDYPKRDD 557
Cdd:PRK09077 499 IVRCAMERKESRGLHYTLDYPELLP 523
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
2-472 |
4.71e-63 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 215.32 E-value: 4.71e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 2 KVQYCDSLVIGGGLAGLRAAVaTQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNskmsdgDNEDLHFMDTVKGSDWGC 81
Cdd:PRK06175 1 MNLYADVLIVGSGVAGLYSAL-NLRKDLKILMVSKGKLNECNTYLAQGGISVARNK------DDITSFVEDTLKAGQYEN 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 82 DQKVARMFVNTAPKAIRELAAWGVPWTRihkgdrmaiinaqkttitEEDfrhGLIHSRDfGGTKKWRTCYTADATGHTML 161
Cdd:PRK06175 74 NLEAVKILANESIENINKLIDMGLNFDK------------------DEK---ELSYTKE-GAHSVNRIVHFKDNTGKKVE 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 162 FAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVrdLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIA 240
Cdd:PRK06175 132 KILLKKVKKRkNITIIENCYLVDIIENDNTCIGAIC--LKDNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIA 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 241 LETGIaQLGNMEAVQFHPTPLFPSGI-----LLTEGCRGDGGILRDVDGHRFMpdyepekKELASRDVVSRRMIEHIRKG 315
Cdd:PRK06175 210 IRNNI-KIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGGKLLNSKGERFV-------DELLPRDVVTKAILEEMKKT 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 316 KgvqSPYgqhLWLDISILGRKHIETNLRDVQEICEYfAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAA 395
Cdd:PRK06175 282 G---SNY---VYLDITFLDKDFLKNRFPTIYEECLK-RGIDITKDAIPVSPAQHYFMGGIKVDLNSKTSMKNLYAFGEVS 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 396 CWDMHGFNRLGGNSVSEAVVagmivgeyFAEHCA---NTQVD-LETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMK 471
Cdd:PRK06175 355 CTGVHGANRLASNSLLEGLV--------FSKRGAekiNSEIDnIKLNITKVYTLKHDVEYYSLLNKKIIIKEIEKLRGDL 426
|
.
1QLB_A 472 D 472
Cdd:PRK06175 427 K 427
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
467-597 |
4.46e-49 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 167.62 E-value: 4.46e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 467 KNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGA 546
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
1QLB_A 547 HNREDYPKRDDINWLNRTLAsWPNPEQTLPTLEYEALDVnEMEIAPRYRGY 597
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLA-YYDGDDGGPRLEYEPVTF-TTLFPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
10-553 |
1.58e-47 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 173.83 E-value: 1.58e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 10 VIGGGLAGLRAAVATQQKGLSTIVLSLIPvKRSHSAAAQGGMQASLgnskmSDGDNEDLHFMDTVKGSDWGCDQKVARMF 89
Cdd:PRK08401 6 IVGGGLAGLTAAISLAKKGFDVTIIGPGI-KKSNSYLAQAGIAFPI-----LEGDSIRAHVLDTIRAGKYINDEEVVWNV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 90 VNTAPKAIRELAAWGVPWTrihkgdrmaiinaqkTTITEedfrhglihsrdfGGTKKWRTCYTADATGHTMLFAVANECL 169
Cdd:PRK08401 80 ISKSSEAYDFLTSLGLEFE---------------GNELE-------------GGHSFPRVFTIKNETGKHIIKILYKHAR 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 170 KLGVS-IQDRKEAIALihQDGKCYGAvvrdLVTGDIIAYVAkgTLIATGGYGRIYKNTtnAVVCEGTGTAI--ALETGiA 246
Cdd:PRK08401 132 ELGVNfIRGFAEELAI--KNGKAYGV----FLDGELLKFDA--TVIATGGFSGLFKFT--AGSPLNLGTLIgdAVMKG-A 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 247 QLGNMEAVQFHPTPLF-PSGI-LLTEGCRGDGGILRDVDGHRFMpdyepekKELASRDVVSRRMIEHIRKGKGVqspygq 324
Cdd:PRK08401 201 PARDLEFVQFHPTGFIgKRGTyLISEAVRGAGAKLVTGDGERFV-------NELETRDIVARAIYRKMQEGKGV------ 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 325 hlWLDISilgrkHIETNLRDVQEICEYF--AGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAACWDMHGF 402
Cdd:PRK08401 268 --FLDAT-----GIEDFKRRFPQIYAFLrkEGIDPSRDLIPVTPIAHYTIGGISVDTFYRTGIKNLYAIGEAASNGFHGA 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 403 NRLGGNSVSEAVVAGMIVgeyfaehcANTQVDLETKTLEKFVKGQEAYMKSLVESkgtedvfkiknrMKDVMDDNVGIFR 482
Cdd:PRK08401 341 NRLASNSLLECIVSGLEV--------ARTISRERPKLREVKEPPYHGYELGDVDS------------IREILWNHAGIVR 400
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
1QLB_A 483 DGPHLEKSVKELEElykksknvgiknkrLHANPELEeayrvpmmlKVALCVAKGALDRTESRGAHNREDYP 553
Cdd:PRK08401 401 SEESLREGLKKLEG--------------IEADPRLK---------LLAKGVLECALAREESRGAHYREDFP 448
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
7-422 |
1.07e-36 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 142.87 E-value: 1.07e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGL-STIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDG--DNEDLHFMDTVKGSDWGCDQ 83
Cdd:TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAaNVVLLEKMPVIGGNSAIAAGGMNAAGTDQQKALGieDSPELFIKDTLKGGRGINDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 84 KVARMFVNTAPKAIRelaawgvpWTRihkgdrmaiinaqkttiTEEDFRHGLIHSrdFGGTKKWRTCYTAD--ATGHTML 161
Cdd:TIGR01813 81 ELVRILAEESKDAVD--------WLQ-----------------DGVGARLDDLIQ--LGGHSVPRAHRPTGgaASGAEIV 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 162 FAVANECLKLGVSIQDRKEAIALI-HQDGKCYGAVVRDlvTGDIIAYVA-KGTLIATGGYGR----------IYKN--TT 227
Cdd:TIGR01813 134 QTLYKKAKKEGIDTRLNSKVEDLIqDDQGSVVGVVVKG--KGKGIYIKAaKAVVLATGGFGSnkemiakydpTLKHlgST 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 228 NAVVCEGTGTAIALETGiAQLGNMEAVQFHPTpLFPS--GILLTEGCRGDGGILRDVDGHRFMpdyepekKELASRDVVS 305
Cdd:TIGR01813 212 NQPGATGDGLLMAEKIG-AALVDMDYIQAHPT-ASPDegGFLISEAVRGYGAILVNKTGERFM-------NELATRDKVS 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 306 RRMI------------EHIRKG-KGVQSPYG-QHLWLDISI--LGrKHIETNLRD-VQEICEY----FAGIDP------- 357
Cdd:TIGR01813 283 DAILaqpgkdaylifdDDVYKKaKMVDNYYRlGVAYKGDSLeeLA-KQFGIPAAAlKQTIKDYngyvASGKDTpfgrpmd 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 358 -----------AEKWAPVLpmqHYSMGGIRTDYRGE------AKLKGLFSAGEAAcWDMHGFNRLGGNSVSEAVVAGMIV 420
Cdd:TIGR01813 362 mptdlskapyyAIKVTPGV---HHTMGGVKINTKAEvldangKPIPGLFAAGEVT-GGVHGANRLGGNAIADCIVFGRIA 437
|
..
1QLB_A 421 GE 422
Cdd:TIGR01813 438 GE 439
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
1-426 |
5.49e-29 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 121.09 E-value: 5.49e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 1 MKVQYcDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDG--DNEDLHFMDTVKGSD 78
Cdd:PRK06481 58 LKDKY-DIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKAQGiaDSNDKFYEETLKGGG 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 79 WGCDQKVARMFVNTAPKAIRELAAWGvpwtrihkgdrmaiINAQKTTITeedfrhglihsrdfGGTKKWRTCYTAD--AT 156
Cdd:PRK06481 137 GTNDKALLRYFVDNSASAIDWLDSMG--------------IKLDNLTIT--------------GGMSEKRTHRPHDgsAV 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVR--DLVTGDIiayVAKGTLIATGGYGR----IYKN----- 225
Cdd:PRK06481 189 GGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGVKVKinGKETKTI---SSKAVVVTTGGFGAnkdmIAKYrpdlk 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 226 ---TTNAVVCEGTGTAIALETGiAQLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMpdyepekKELASRD 302
Cdd:PRK06481 266 gyvTTNQEGSTGDGIKMIEKLG-GTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFG-------NELDTRD 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 303 VVS-----------------------RRMIEHIRKGKGVQSPYGQHLWLDISILG---RKHIETNLRDVQ-EICEYF--- 352
Cdd:PRK06481 338 KVSaainklpekyayvvfdsgvkdrvKAIAQYEEKGFVEEGKTIDELAKKINVPAetlTKTLDTWNKAVKnKKDEAFgrt 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 353 AGIDPAEKWAP-----VLPMQHYSMGGIRTDYRGE------AKLKGLFSAGEAAcWDMHGFNRLGGNSVSEAVVAGMIVG 421
Cdd:PRK06481 418 TGMDNDLSTGPyyaikIAPGIHYTMGGVKINTNTEvlkkdgSPITGLYAAGEVT-GGLHGENRIGGNSVADIIIFGRQAG 496
|
....*
1QLB_A 422 EYFAE 426
Cdd:PRK06481 497 TQSAE 501
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
1-560 |
2.97e-19 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 91.65 E-value: 2.97e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPVKRSHSAAAqgGMQAsLGNSKMSDGDNEDLHFMDTVKGSD 78
Cdd:PRK08275 5 TQEVETDILVIGGGTAGPMAAIKAKERnpALRVLLLEKANVKRSGAISM--GMDG-LNNAVIPGHATPEQYTKEITIAND 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 79 WGCDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDrmaiINAQKTtiteedfrHGLihsrdfgGTkkwrtcYTAD-ATG 157
Cdd:PRK08275 82 GIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGD----YAVKKV--------HHM-------GS------YVLPmPEG 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 158 HTMLFAVANECLKLGVSIQDRKEAIALI-HQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI-----------YKN 225
Cdd:PRK08275 137 HDIKKVLYRQLKRARVLITNRIMATRLLtDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLglpasgylfgtYEN 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 226 TTNAvvceGTGTAIALETGiAQLGNMEAVQFhpTPLF-----PSGILLTEGCrgdGGILRDVDGHRFMpdyepekkelaS 300
Cdd:PRK08275 217 PTNA----GDGYAMAYHAG-AELANLECFQI--NPLIkdyngPACAYVTGPL---GGYTANAKGERFI-----------E 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 301 RDVVS-RRMIEHIRKGKGVQSPygqhLWLDISILGRKHIeTNLRDVQEICE------YFA--GIDPAEKwaPVlPMqH-- 369
Cdd:PRK08275 276 CDYWSgQMMWEFYQELQSGNGP----VFLKLDHLAEETI-QTIETILHTNErpsrgrFHEgrGTDYRQQ--MV-EM-His 346
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 370 -------YSMGGIRTDYRGEAKLKGLFSAGEAACWdmhGFNRLGGnsvseAVVAGMIVGEYFAEHCANTqvDLETKTLEK 442
Cdd:PRK08275 347 eigfcsgHSASGVWVNEKAETTVPGLYAAGDMASV---PHNYMLG-----AFTYGWFAGENAAEYVAGR--DLPEVDAAQ 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 443 FVKGQEAYMKSLVESKG---TEDVFKIKNRMKDVMDDnvgifrdgphlEKSVKELEELYKKSKNVGIKNKRLHA-NP-EL 517
Cdd:PRK08275 417 VEAERARVLAPLHREDGlppAQVEYKLRRLVNDYLQP-----------PKVTRKMEIGLQRFAEIREDLERIKArDPhEL 485
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
1QLB_A 518 EEAYRVPMMLKVALCVAKGALDRTESRGA--HNREDYPKRDDINW 560
Cdd:PRK08275 486 MRALEVSSIRDCAEMAARASLFRTESRWGlyHYRVDFPERNDAEW 530
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
9-422 |
9.50e-19 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 90.99 E-value: 9.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 9 LVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQA--SLGNSKMSDGDNEDLHFMDTVKGSDWG-CDQKV 85
Cdd:PTZ00306 413 IVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGGNSAKATSGINGwgTRAQAKQDVLDGGKFFERDTHLSGKGGhCDPGL 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 86 ARMFVNTAPKAIRELAAWGVPWTRIHKgdrmaiinaqkttiteedfrhglihsrdFGGTKKWRTCYTADAT-------GH 158
Cdd:PTZ00306 493 VKTLSVKSADAISWLSSLGVPLTVLSQ----------------------------LGGASRKRCHRAPDKKdgtpvpiGF 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 159 TMLFAVANEC---LKLGVSIQDRKEAIALIHQ-----DG----KCYGAVVRDL--VTGDIIAYVAKGTLIATGGYG---- 220
Cdd:PTZ00306 545 TIMRTLEDHIrtkLSGRVTIMTETTVTSLLSEssarpDGvreiRVTGVRYKQAsdASGQVMDLLADAVILATGGFSndht 624
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 221 -----RIYKN------TTNAVVCEGTGTAIALETGiAQLGNMEAVQFHPT-------PLFPSGILLTEGCRGDGGILRDV 282
Cdd:PTZ00306 625 pnsllREYAPqlsgfpTTNGPWATGDGVKLARKLG-ATLVDMDKVQLHPTglidpkdPSNRTKYLGPEALRGSGGVLLNK 703
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 283 DGHRFMpdyepekKELASRDVVSRRMIEHIRK----------------------GKGVQSPYGQHLWL-----DISILGr 335
Cdd:PTZ00306 704 NGERFV-------NELDLRSVVSQAIIAQGNEypgsggskfaycvlneaaaklfGKNSLGFYWKRLGLfqrvdDVKGLA- 775
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 336 KHIETNLRDVQEICEYFAGIDPAEKWAP---------------------VLPMQHYSMGG--------IRTDYRGEAKLK 386
Cdd:PTZ00306 776 KLIGCPVENLHRTLETYERLSTKKVACPltgkvvfpcvvgtqgpyyvafVTPSIHYTMGGclispsaeMQMEDNSVNIFE 855
|
490 500 510 520
....*....|....*....|....*....|....*....|..
1QLB_A 387 ------GLFSAGEAAcWDMHGFNRLGGNSVSEAVVAGMIVGE 422
Cdd:PTZ00306 856 drrpilGLFGAGEVT-GGVHGGNRLGGNSLLECVVFGKIAGD 896
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
6-560 |
7.61e-12 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 68.72 E-value: 7.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKrsHSAAAQGGMQAsLGNSKMSDGDNEDLHFMDTVKGSDWGCDQKV 85
Cdd:PRK13800 14 CDVLVIGGGTAGTMAALTAAEHGANVLLLEKAHVR--HSGALAMGMDG-VNNAVIPGKAEPEDYVAEITRANDGIVNQRT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 86 ARMFVNTAPKAIRELAAWGVPWTRIHKGDRmaiinAQKTTITEEDFRHGLIHSRDfggTKKwrtcytadatghtMLFAVA 165
Cdd:PRK13800 91 VYQTATRGFAMVQRLERYGVKFEKDEHGEY-----AVRRVHRSGSYVLPMPEGKD---VKK-------------ALYRVL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 166 NE-CLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI-----------YKNTTNAvvce 233
Cdd:PRK13800 150 RQrSMRERIRIENRLMPVRVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLglpasgylygtYENPTNA---- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 234 GTGTAIALETGiAQLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMpdyepekkelaSRDVVSRRMIEHIR 313
Cdd:PRK13800 226 GDGYSMAYHAG-AELSGIECFQINPLIKDYNGPACAYVANPFGGYQVNAQGERFV-----------DSDYWSGQMMAEVK 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 314 KGkgVQSPYGQhLWLDISILGRKHIETnLRDVQEICE------YFAGI-------DPAEKWAPVLPMQHYSMGGIRTDYR 380
Cdd:PRK13800 294 RE--IESARGP-IYLKVSHLPEETLSA-LESILHTTErptrgtFHANRghdyrthDIEMHISEIGLCSGHSASGVWVDEH 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 381 GEAKLKGLFSAGEAACwdmhgfnrLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTlEKFVKGQEAYMKSLVESKGT 460
Cdd:PRK13800 370 ARTTVPGLYAAGDLAC--------VPHNYMIGAFVFGDLAGAHAAGTLAEVPAPGELPA-DQLAEAHELIYRPLRHPDGP 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 461 EDVfKIKNRMKDVMDDNVGIFRDGPHLEKSVKELEELYKKSKNVGIKNKRlhanpELEEAYRVPMMLKVALCVAKGALDR 540
Cdd:PRK13800 441 PQP-QVEYKLRRFVNDYVAPPKTAAKLSIAVETFERMAAEIAGMGARTPH-----ELMRCAEVSFIRDCAEMAARSSLTR 514
|
570 580
....*....|....*....|..
1QLB_A 541 TESRGA--HNREDYPKRDDINW 560
Cdd:PRK13800 515 TESRWGlyHDRADLPERDDASW 536
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
164-561 |
3.66e-09 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 59.55 E-value: 3.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 164 VANECLK-LGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYK-NTT------------NA 229
Cdd:PRK06854 138 VAEAAKKaLGDNVLNRVFITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRpRSPgegrgrmwyppfNT 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 230 vvceGTGTAIALETGiAQLGNME----AVQFHPTpLFPSG-ILLTEGCRgdggiLRDVDGHRFMPDYEPEKKELASRDVV 304
Cdd:PRK06854 218 ----GSGYAMGIRAG-AEMTTFEnrfiPLRFKDG-YGPVGaWFLLFKAK-----AVNALGEEYEAKNAAELKKYVPYADY 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 305 -----SRR---MIEHIRKGKGvqsPygqhLWLDIS-ILGRKHIEtnlrdvQEICEYF-------------AGIDPAEKWA 362
Cdd:PRK06854 287 kpiptCLRnyaTVEENKAGRG---P----IYMDTEeALQDKHLE------SELWEDFldmtpgqallwaaQNIEPEEENS 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 363 PVLPMQHYSMGGIRT-------------------DYRGEAKLKGLFSAGEAAcwdmhgfnrlGGNS---VSEAVVAGMIV 420
Cdd:PRK06854 354 EIMGTEPYIVGSHSGasgywvsgpedwvpeeykwGYNRMTTVEGLFAAGDVV----------GGSPhkfSSGSFAEGRIA 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 421 GEYFAEHC----------ANTQVDLETKTLEKFVKGQEAYMKSLVESKGTEDVFKIKN---RMKDVMDDNVG----IFR- 482
Cdd:PRK06854 424 AKAAVRYIldnkdekpeiDDDQIEELKKEIYAPLERYEEFKDYSTDPDVNPNYISPEQleeRLQKIMDEYAGgistNYTt 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1QLB_A 483 DGPHLEKSVKELEELYKKSKNVGIKNkrLHanpELEEAYRVPMMLKVALCVAKGALDRTESR--GAHNREDYPKRDDINW 560
Cdd:PRK06854 504 NEKLLEIALELLEMLEEDSEKLAARD--LH---ELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDENW 578
|
.
1QLB_A 561 L 561
Cdd:PRK06854 579 K 579
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
6-35 |
3.09e-05 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 46.71 E-value: 3.09e-05
10 20 30
....*....|....*....|....*....|
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLS 35
Cdd:COG3075 3 FDVVVIGGGLAGLTAAIRAAEAGLRVAIVS 32
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
6-56 |
3.62e-05 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 46.77 E-value: 3.62e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLslipvkrshsAAAQGGMQASLG 56
Cdd:PRK05329 3 FDVLVIGGGLAGLTAALAAAEAGKRVALV----------AKGQGALHFSSG 43
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
1-34 |
4.96e-04 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 42.97 E-value: 4.96e-04
10 20 30
....*....|....*....|....*....|....
1QLB_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVL 34
Cdd:PRK07494 3 MEKEHTDIAVIGGGPAGLAAAIALARAGASVALV 36
|
|
| PRK12839 |
PRK12839 |
FAD-dependent oxidoreductase; |
6-67 |
3.82e-03 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237223 [Multi-domain] Cd Length: 572 Bit Score: 40.20 E-value: 3.82e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNED 67
Cdd:PRK12839 9 YDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKASTCGGATAWSGGWMWTPGNSLARADGVVED 70
|
|
| glycerol3P_GlpB |
TIGR03378 |
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ... |
7-35 |
4.84e-03 |
|
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]
Pssm-ID: 213807 Cd Length: 419 Bit Score: 40.00 E-value: 4.84e-03
10 20
....*....|....*....|....*....
1QLB_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLS 35
Cdd:TIGR03378 2 DVIIIGGGLAGLSCALRLAEAGKKCAIIA 30
|
|
| PRK06134 |
PRK06134 |
putative FAD-binding dehydrogenase; Reviewed |
6-51 |
7.62e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 180419 [Multi-domain] Cd Length: 581 Bit Score: 39.32 E-value: 7.62e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
1QLB_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGM 51
Cdd:PRK06134 13 CDVLVIGSGAAGLSAAVTAAWHGLKVIVVEKDPVFGGTTAWSGGWM 58
|
|
| nitri_red_nirB |
TIGR02374 |
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ... |
4-38 |
8.50e-03 |
|
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]
Pssm-ID: 162827 [Multi-domain] Cd Length: 785 Bit Score: 39.43 E-value: 8.50e-03
10 20 30
....*....|....*....|....*....|....*
1QLB_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38
Cdd:TIGR02374 139 RFKKAAVIGGGLLGLEAAVGLQNLGMDVSVIHHAP 173
|
|
| |
