1CZ4,1R7R,1QDN


Conserved Protein Domain Family
CDC48_N

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smart01073: CDC48_N 
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Cell division protein 48 (CDC48) N-terminal domain
This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases is a substrate 185-residue recognition domain.
Statistics
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PSSM-Id: 215012
Aligned: 122 rows
Threshold Bit Score: 42.2112
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1CZ4_A         9 LRVAEAnS-TD----PGMSRVRLDESSRRLLDAEIGDVVEIE----KVRKTVGRVYRaRPEDENkgIVRIDSVMRNNCGA 79  Thermoplasma ac...
XP_445890      6 LHVANSpNnSY----ALANVVAVSPSDFP-----NNSYILLD----NL-FVFTTRHS--NEIPPk-TIGLNGNQRTWGGW 68  Candida glabrat...
XP_571385    122 FNIAPCpSdAL----ALTNRLVVHPSDFP----SDVDFALLR----G-RFVFSIIRDnTGTLPPg-HVGPSKIIRQWVGL 187 Cryptococcus ne...
XP_001817752 102 LRPAKSpDnNY----TFGNLVAVSPQDFPPTRDGL-DLFLLV----NDLYVFSA--RpYDGFPPg-HISMSDPQRTWAGV 169 Aspergillus ory...
NP_192400     12 MTVTNTpSaDL----AFTNLAYCSSSDLRQFSVPGSDLFLANv---ADSFILSLCGHg--SIRDg-NIALNAIQRRHARV 81  thale cress
NP_594690     61 FRIVKAtStED----ALTNCIIVSPMDFKQ------QYIIVD----NSR-VFSTKp--VPGFPQg-CLGASQPHREWASW 122 Schizosaccharom...
XP_391079     71 LRVEKVtDkSLqsrlIYGNLCAVSPDDFPPNRDGSDLYILLQagqpMGEYvVTAKPV--PGFPQg-CISLSDPQRSWAGI 147 Gibberella zeae...
XP_504542     73 LGVGK--DkAF----ALANLLEVPPGTFADG-----DYVIINn-----qHvFTVRQS--PHAAPg-QILAGAVQRRWAAL 133 Yarrowia lipoly...
XP_001387178  46 FVVDQSpDnRI----VSSNCVAVNPGDFAS-------FPNRTpfsfDAEFvYSIEKD--ERMAPg-SVGMGGNIRTWGSW 111 Pichia stipitis...
NP_985027     33 MKIANCpNnAL----ALANVAAVSPSDFPDN-----IYIAVDef-----fvFTTQHS--SSVEPg-TIGFNGNQRTWGGW 95  Ashbya gossypii...
1CZ4_A        80 S-IGDKVKVRKV 90  Thermoplasma acidophilum
XP_445890     69 S-LNQSVQVRPF 79  Candida glabrata CBS 138
XP_571385    188 SaVGETVDIEPY 199 Cryptococcus neoformans var. neoformans JEC21
XP_001817752 170 A-FTDSVNVQIY 180 Aspergillus oryzae RIB40
NP_192400     82 S-TGDMVSVSRF 92  thale cress
NP_594690    123 S-LNQQVHVADY 133 Schizosaccharomyces pombe 972h-
XP_391079    148 T-MRDVFQGEIY 158 Gibberella zeae PH-1
XP_504542    134 S-TNMTVHVAPY 144 Yarrowia lipolytica CLIB122
XP_001387178 112 S-RGQSITVESY 122 Pichia stipitis CBS 6054
NP_985027     96 S-LNQEVRVRPF 106 Ashbya gossypii ATCC 10895
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