5LEW


Conserved Protein Domain Family
DNA_pol3_finger

?
pfam17657: DNA_pol3_finger 
Click on image for an interactive view with Cn3D
Bacterial DNA polymerase III alpha subunit finger domain
Statistics
?
PSSM-Id: 407553
Aligned: 89 rows
Threshold Bit Score: 113.782
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5LEW_A  587 NLTIIGDAIDNVranrgiDLDLESVPLDDKATYELLGRGDTL---------------GVFQLDGGPMRDLLRRMQPTGFE 651  Mycobacterium tuber...
P47729 1087 DPTALKMLEKLT------GVNVKDIPKKDEKIISIFTSPKALgisseeilgektgalGIPEFGTNFVRQMLSEAKPKTFA 1160 Mycoplasmopsis pulm...
Q8DWE0 1113 DPTMIRKLQDLS------GIDPKTIPADDPEVMKLFSGTEVLgvteeei-gtptgmlGIPEFGTNFVRGMVDETHPTTFA 1185 Streptococcus mutan...
Q9CDT7 1288 DPTMIRKLQSLS------GIVPQDIPMDDPGVMKLFTGTESLglteeql-gvklgtlGIPEMGTFTSMNMIAEAKPKNFA 1360 Lactococcus lactis ...
Q88VK2 1097 DPTMIRMLQDLS------GVQPESIPPVDPHVMKIFSSPEVLgvtedqi-fsktgtlGIPEFGTRFVRGMLEETHPSTFN 1169 Lactiplantibacillus...
Q831W8 1102 DPTVIRMLQDLS------GIEPKTIPTDDPEVMRIFEGPDVLgvdaeqi-ysktgtlGIPEFGTRFVRGMLEQTHPSTFA 1174 Enterococcus faecalis
Q97DN0 1103 DPTVIRMLQDIT------GINPHEIPMDDKETMSLFSSTKALgvtpeqi-nskvgtfGIPEFGTKFVRGMLLDTMPKTFS 1175 Clostridium acetobu...
Q8XJR3 1108 DPTVLRMLQDLT------GLDPKTIPLNDPKVISLFTSPDALgvtkeel-gcevgsyGLPEFGTKFVRQMLVDTQPKSFA 1180 Clostridium perfrin...
Q8RA32 1061 DPTVIRMLEDLT------GVNARKIPLDDKKTMSLFTSVEALgidpeel-gtpvgtlGLPEFGTKFVRQMLIETRPTTFD 1133 Caldanaerobacter su...
Q9ZHF6 1028 DPTFIKMLKDLT------GIDPMTIPMDDPDTLAIFSSVKPLgvdpvel-esdvgtyGIPEFGTEFVRGMLVETRPKSFA 1100 Thermotoga maritima...
5LEW_A  652 DVVAVIALYRPGPMGmnAHNDYADRKNNRQaikpihpeleePLREILAETYGLIVYqeqimriaQKVASYSLARADILRK 731  Mycobacterium tuber...
P47729 1161 DLVSISGLSHGTDVWinN-AHYIIQSLGK------------TLDQVISCRDDIMVD--------LIKKGVPIDLSFTIME 1219 Mycoplasmopsis pulm...
Q8DWE0 1186 ELLQLSGLSHGTDVWlgNAQDLIKQ--GIA-----------TLSTVIGCRDDIMVY--------LMHAGLEPKMAFTIME 1244 Streptococcus mutan...
Q9CDT7 1361 DLLQISGLSHGTDVWsgNAQDLIRS--GIA-----------DLSSVIGCRDDIMVY--------LIHKGLENGLAFTIME 1419 Lactococcus lactis ...
Q88VK2 1170 ELLQISGLSHGTDVWlgNAEELIKD--GTV-----------TLAEVIGCRDNIMTD--------LIHYGMESDMSFQIME 1228 Lactiplantibacillus...
Q831W8 1175 ELLQISGLSHGTDVWlgNAEELIRR--GEA-----------NLAEVIGCRDDIMVY--------LIHAGLDSGMAFKIME 1233 Enterococcus faecalis
Q97DN0 1176 DLICISGLSHGTDVWlgNAKDLIDQ--GIV-----------TLSEAVCTRDDIMIY--------LIKKGLPPNTAFKIME 1234 Clostridium acetobu...
Q8XJR3 1181 DLVRISGLSHGTDVWlnNAQYFIKE--GYT-----------TLKDCIATRDDIMVY--------LMYKDLPPKTAFTIME 1239 Clostridium perfrin...
Q8RA32 1134 ELVRISGLSHGTDVWlnNAQDIIRE--GIA-----------TLKEVIAARDDIMLY--------LISKGMDKKLSFKIME 1192 Caldanaerobacter su...
Q9ZHF6 1101 ELVRISGLSHGTDVWlnNARDWINL--GYA-----------KLSEVISCRDDIMNF--------LIHKGMEPSLAFKIME 1159 Thermotoga maritima...
5LEW_A  732 AMGK-KKREVLEKEFEGFSDGMQANG 756  Mycobacterium tuberculosis H37Rv
P47729 1220 QVRK-GKGLSLEQKRKLIEHGienwy 1244 Mycoplasmopsis pulmonis UAB CTIP
Q8DWE0 1245 RVRKgAWLKISEEERNGYISAMRENN 1270 Streptococcus mutans UA159
Q9CDT7 1420 RVRKgMWNKIPAEEREKYVEAMREHD 1445 Lactococcus lactis subsp. lactis Il1403
Q88VK2 1229 HVRKgR------GIPDEWQQAMKDAN 1248 Lactiplantibacillus plantarum WCFS1
Q831W8 1234 TVRKgQWNKIPDELRDTYLNAMKENN 1259 Enterococcus faecalis
Q97DN0 1235 LVRK-GKALKDPKKWAEYEALMREHE 1259 Clostridium acetobutylicum
Q8XJR3 1240 KVRK-GK-----GLSEEDEALMREKN 1259 Clostridium perfringens str. 13
Q8RA32 1193 NVRK-GK-----GVTQEEIEEMKKHG 1212 Caldanaerobacter subterraneus subsp. tengcongensis MB4
Q9ZHF6 1160 NVRKgK------GITEEMESEMRRLK 1179 Thermotoga maritima MSB8
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap