Conserved Protein Domain Family
DUF2122

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pfam09895: DUF2122 
RecB-family nuclease (DUF2122)
This domain, found in various hypothetical archaeal proteins, has no known function.
Statistics
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PSSM-Id: 378295
Aligned: 26 rows
Threshold Bit Score: 57.2755
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Tpen_0419  41 GPAAQVGIPEAQKLALRHNCNLIVLSDLPEVVELLRPNVILVAVPgKYgGRELSEVLKelegktsggeASRIAVVFGGAE 120
jgi:Tagg_1293  42 GAAAQIGVPEAHKIAYKAGKPLIVLPELADVSRILGASPVYYLSD-E--GEEKGFEEVfa-------sSGNVAVVLNAGD 111
WP_012608931   36 GAAAQIGVPEAHKIAIKQGKPFIVLPEISDLSNVLGCNRILYINE-S--GREVPLAEVld-------lEERVAILVSSGE 105 Desulfurococcu...
jgi:Cmaq_0653  39 GSAAQQGVPEAFKIALKYSSSLVVLPTIKDAVDLFKPDNILVIRRpGPqVKPLTEFMNi---------NGRVMLAVDGSD 109
jgi:Vdis_1267  45 GTAAQQGVPEAFRLVLRSGATLIVLPDIKDAVELLHPDAVYFLSTrgdsm--------------gnevKGRVLIVIQASD 110
WP_014127674   38 GSAAQQ-IGDLFKYALKVGGEVLIFNDLRDAYEALRPDVVIALTR-PEkGVEPLGep----------pQGRTLLVVSGTD 105 Thermoproteus ...
Q8ZTS8         38 GAAAQQ-IGDLFKLAFKMGGEVLVFNDINDAVDVLRPDVIFALGK-PEkDARPIek-----------vEGRVMILVHGAD 104 Pyrobaculum ae...
Q58599         39 aSAAQSGIPTLHKMAYKLGKNVLFFEELDDAIEVLRPEKVFLIGN-KSiCDEKVDFNEv---------GENDLVVFCGAS 108 Methanocaldoco...
Q6M1A6         36 GSAAQNGIPIAQKMAIKLNKNLMFLEDIDDAVEILNPERVILIAD-SKiAEEKIDFKSi---------GKRDLVIFSGNS 105 Methanococcus ...
jgi:Mvol_1420  36 SSAAQNGIPIVQKMAIKNNKNLVYLEDINDAIEILNPEKVIMITN-SNiGKEKLNFEEi---------GEKDLIVFCGSN 105
jgi:Tpen_0419 121 PGLSQKEMKTGELVHPDGVEEDIGSTGVAAVTLY 154
jgi:Tagg_1293 112 VEPSRKELENVKTVWVKNFPKGLPAIALSGVIVY 145
WP_012608931  106 QEPSRKEVENTDSVWLREVPRGLPVTGLIGILVY 139 Desulfurococcus amylolyticus
jgi:Cmaq_0653 110 QDIR---IEGSNVNYVTSITRDVGNLGQLAIALC 140
jgi:Vdis_1267 111 QPFMQSELNLGRQIK--VVGRDVGSTALLTLALN 142
WP_014127674  106 LPITPRELPQGAKLAY-AVDADIGSVGQLAVALY 138 Thermoproteus tenax
Q8ZTS8        105 LAFSPRELPQNAVMSY-AVKKDVGSTGHLAIALY 137 Pyrobaculum aerophilum
Q58599        109 TGFTKLELEKGLGRY--IVENEIGALGNLAIFLY 140 Methanocaldococcus jannaschii DSM 2661
Q6M1A6        106 SGFSKKELEKGTGMH--ILENNVGAIGEVAVFLY 137 Methanococcus maripaludis
jgi:Mvol_1420 106 SGFSLKEIESANAEPKHLLGVNIGPIGEASILLY 139
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